Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G196700 Manihot esculenta HOM05D005206 ORTHO05D006219 1.5e-311 1072.0 535 100.0
Potri.010G094800 Populus trichocarpa HOM05D005206 ORTHO05D006219 3.2e-234 815.1 536 77.2
Atru.chr11.1960 Acer truncatum HOM05D005206 ORTHO05D006219 6.1e-225 784.3 540 73.0
Sabra10G0067100 Salix brachista HOM05D005206 ORTHO05D006219 8.0e-225 783.9 565 71.9
Dinv30996 Davidia involucrata HOM05D005206 ORTHO05D006219 6.3e-222 774.2 549 71.4
TAR371G0117 Trochodendron aralioides HOM05D005206 ORTHO05D006219 2.0e-220 769.2 550 72.5
arahy.Tifrunner.gnm1.ann1.05N2IU Arachis hypogaea HOM05D005206 ORTHO05D006219 4.5e-220 768.1 525 72.0
Hma1.2p1_1049F.1_g251730 Hydrangea macrophylla HOM05D005206 ORTHO05D006219 1.3e-219 766.5 535 72.3
Ciclev10031184m.g Citrus clementina HOM05D005206 ORTHO05D006219 3.8e-219 765.0 542 72.0
GSVIVG01020174001 Vitis vinifera HOM05D005206 ORTHO05D006219 8.5e-219 763.8 552 70.8
THA.LOC104816736 Tarenaya hassleriana HOM05D005206 ORTHO05D006219 9.5e-218 760.4 550 71.3
Lj2g0017178 Lotus japonicus HOM05D005206 ORTHO05D006219 1.6e-217 759.6 539 70.1
Gorai.002G164200 Gossypium raimondii HOM05D005206 ORTHO05D006219 2.3e-216 755.7 544 70.6
Sed0001006 Sechium edule HOM05D005206 ORTHO05D006219 3.0e-216 755.4 540 69.8
QL03p062489 Quercus lobata HOM05D005206 ORTHO05D006219 2.0e-215 752.7 544 69.7
Thhalv10009477m.g Eutrema salsugineum HOM05D005206 ORTHO05D006219 4.4e-215 751.5 537 70.6
arahy.Tifrunner.gnm1.ann1.U6W7RM Arachis hypogaea HOM05D005206 ORTHO05D006219 7.5e-215 750.7 556 68.2
Thecc.02G242400 Theobroma cacao HOM05D005206 ORTHO05D006219 9.8e-215 750.4 540 70.9
Gohir.A01G141200 Gossypium hirsutum HOM05D005206 ORTHO05D006219 1.3e-214 750.0 543 70.2
Sp1g09150 Schrenkiella parvula HOM05D005206 ORTHO05D006219 3.7e-214 748.4 539 72.2
CSS0048376 Camellia sinensis var. sinensis HOM05D005206 ORTHO05D006219 1.1e-213 746.9 549 70.5
RcHm_v2.0_Chr4g0444551 Rosa chinensis HOM05D005206 ORTHO05D006219 7.0e-213 744.2 542 69.0
Rhsim12G0124400 Rhododendron simsii HOM05D005206 ORTHO05D006219 9.2e-213 743.8 544 70.6
Aa31LG1G4440 Aethionema arabicum HOM05D005206 ORTHO05D006219 1.2e-212 743.4 543 70.0
Eucgr.B02561 Eucalyptus grandis HOM05D005206 ORTHO05D006219 1.2e-212 743.4 536 69.4
CsaV3_5G031880 Cucumis sativus L. HOM05D005206 ORTHO05D006219 2.7e-212 742.3 537 69.1
Nitab4.5_0000257g0230 Nicotiana tabacum HOM05D005206 ORTHO05D006219 2.7e-212 742.3 545 69.7
FvH4_4g35030 Fragaria vesca HOM05D005206 ORTHO05D006219 3.5e-212 741.9 536 69.0
Phvul.004G071000 Phaseolus vulgaris HOM05D005206 ORTHO05D006219 1.3e-211 740.0 535 69.0
Glyma.02G065600 Glycine max HOM05D005206 ORTHO05D006219 1.7e-211 739.6 548 68.6
TWI36G1721 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 2.3e-211 739.2 548 69.2
Nitab4.5_0005722g0070 Nicotiana tabacum HOM05D005206 ORTHO05D006219 2.9e-211 738.8 541 70.2
Lalb_Chr09g0326511 Lupinus albus HOM05D005206 ORTHO05D006219 1.5e-210 736.5 540 68.9
Carub.0001s0995 Capsella rubella HOM05D005206 ORTHO05D006219 7.3e-210 734.2 537 70.0
Lj3A1048T22 Lonicera japonica HOM05D005206 ORTHO05D006219 2.1e-209 732.6 542 69.6
RcHm_v2.0_Chr4g0444541 Rosa chinensis HOM05D005206 ORTHO05D006219 2.8e-209 732.3 542 68.5
Dinv31107 Davidia involucrata HOM05D005206 ORTHO05D006219 1.8e-208 729.6 515 71.5
CARHR010660 Cardamine hirsuta HOM05D005206 ORTHO05D006219 3.0e-208 728.8 539 69.9
Nn4g22885 Nelumbo nucifera HOM05D005206 ORTHO05D006219 3.0e-208 728.8 545 69.4
Medtr7g039450 Medicago truncatula HOM05D005206 ORTHO05D006219 4.0e-208 728.4 530 68.3
BcaC07g38608 Brassica carinata HOM05D005206 ORTHO05D006219 6.8e-208 727.6 541 70.1
Aqoxy3G03082 Aquilegia oxysepala HOM05D005206 ORTHO05D006219 1.5e-207 726.5 550 67.5
Medtr5g040170 Medicago truncatula HOM05D005206 ORTHO05D006219 5.7e-207 724.5 530 67.9
CAN.G1160.5 Capsicum annuum HOM05D005206 ORTHO05D006219 9.8e-207 723.8 545 68.1
Migut.L01447 Erythranthe guttata HOM05D005206 ORTHO05D006219 1.7e-206 723.0 540 68.3
vmacro16280 Vaccinium macrocarpon HOM05D005206 ORTHO05D006219 2.2e-206 722.6 557 68.0
MSTRG.7873 Avicennia marina HOM05D005206 ORTHO05D006219 2.9e-206 722.2 540 68.3
C08p13760 Brassica napus HOM05D005206 ORTHO05D006219 4.9e-206 721.5 541 69.3
BraA08t35305Z Brassica rapa HOM05D005206 ORTHO05D006219 6.4e-206 721.1 539 68.5
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 8.3e-206 720.7 545 67.9
BcaC07g38570 Brassica carinata HOM05D005206 ORTHO05D006219 9.2e-205 717.2 541 68.6
C08p13780 Brassica napus HOM05D005206 ORTHO05D006219 9.2e-205 717.2 541 68.6
Actinidia15006 Actinidia chinensis HOM05D005206 ORTHO05D006219 2.7e-204 715.7 565 66.7
Lsat_1_v5_gn_9_83200 Lactuca sativa HOM05D005206 ORTHO05D006219 2.7e-204 715.7 538 68.2
PSO832G4147 Papaver somniferum HOM05D005206 ORTHO05D006219 5.9e-204 714.5 547 65.8
BolC8t49011H Brassica oleracea HOM05D005206 ORTHO05D006219 7.8e-204 714.1 541 68.8
Haze_12137 Corylus avellana HOM05D005206 ORTHO05D006219 1.0e-203 713.8 588 63.8
CANSAT56G0905 Cannabis sativa HOM05D005206 ORTHO05D006219 6.6e-203 711.1 536 67.5
Gohir.D01G132600 Gossypium hirsutum HOM05D005206 ORTHO05D006219 6.6e-203 711.1 523 69.6
A08p33920 Brassica napus HOM05D005206 ORTHO05D006219 2.5e-202 709.1 563 65.5
HanXRQChr16g0527551 Helianthus annuus HOM05D005206 ORTHO05D006219 5.6e-202 708.0 539 68.1
PSO063G3522 Papaver somniferum HOM05D005206 ORTHO05D006219 1.0e-200 703.7 551 64.2
SGA_v2.0_scaffold166G38340 Striga asiatica HOM05D005206 ORTHO05D006219 1.0e-200 703.7 638 59.4
PGR119G2380 Punica granatum HOM05D005206 ORTHO05D006219 2.3e-200 702.6 545 67.9
FvH4_4g35010 Fragaria vesca HOM05D005206 ORTHO05D006219 1.5e-199 699.9 535 67.1
Sc11g0001370 Simmondsia chinensis HOM05D005206 ORTHO05D006219 2.6e-199 699.1 561 63.6
EL10Ac8g20565 Beta vulgaris HOM05D005206 ORTHO05D006219 5.8e-199 698.0 551 67.0
MBI15_g34233_MAGBIO Magnolia biondii HOM05D005206 ORTHO05D006219 9.8e-199 697.2 595 62.0
DCAR_007103 Daucus carota HOM05D005206 ORTHO05D006219 4.9e-198 694.9 554 65.3
Ah.03g132350 Amaranthus hybridus HOM05D005206 ORTHO05D006219 8.3e-198 694.1 552 63.9
SalBow2G2775 Salvia bowleyana HOM05D005206 ORTHO05D006219 3.2e-197 692.2 545 65.5
Hund25315 Selenicereus undatus HOM05D005206 ORTHO05D006219 6.6e-195 684.5 554 63.7
ECA236G3606 Erigeron canadensis HOM05D005206 ORTHO05D006219 5.6e-194 681.4 543 64.6
Solyc05g006120.3 Solanum lycopersicum HOM05D005206 ORTHO05D006219 1.2e-193 680.2 538 65.8
Sopen05g002140 Solanum pennellii HOM05D005206 ORTHO05D006219 2.1e-193 679.5 537 65.2
Duzib248G0782 Durio zibethinus HOM05D005206 ORTHO05D006219 8.1e-193 677.6 535 65.6
ATR1149G100 Amborella trichopoda HOM05D005206 ORTHO05D006219 5.8e-191 671.4 543 63.4
Peaxi162Scf00421g00833 Petunia axillaris HOM05D005206 ORTHO05D006219 9.9e-191 670.6 545 65.5
Os06g0237200 Oryza sativa ssp. japonica HOM05D005206 ORTHO05D006219 3.5e-188 662.1 536 62.1
AUR62039408 Chenopodium quinoa HOM05D005206 ORTHO05D006219 3.9e-187 658.7 569 61.0
COL.COLO4_38096 Corchorus olitorius HOM05D005206 ORTHO05D006219 6.2e-185 651.4 511 67.7
TPR.G13491 Trifolium pratense HOM05D005206 ORTHO05D006219 3.1e-184 649.0 489 66.7
Ca_18093_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 2.6e-183 646.0 515 63.9
MELO3C034123.2 Cucumis melo HOM05D005206 ORTHO05D006219 1.7e-182 643.3 577 60.0
AT1G10520 Arabidopsis thaliana HOM05D005206 ORTHO05D006219 1.9e-181 639.8 481 68.4
TWI36G0196 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 6.0e-180 634.8 485 67.0
AL1G21320 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 2.3e-179 632.9 455 71.2
Zm00001eb371940 Zea mays HOM05D005206 ORTHO05D006219 3.3e-178 629.0 560 58.4
ClCG05G025020 Citrullus lanatus HOM05D005206 ORTHO05D006219 4.4e-175 618.6 538 61.0
CiPaw.06G074900 Carya illinoinensis HOM05D005206 ORTHO05D006219 1.9e-170 603.2 383 76.8
Psat2g114280 Pisum sativum HOM05D005206 ORTHO05D006219 5.6e-170 601.7 464 64.2
FAN12G3755 Fragaria x ananassa HOM05D005206 ORTHO05D006219 4.8e-169 598.6 536 59.3
SEGI_33189 Sequoiadendron giganteum HOM05D005206 ORTHO05D006219 8.1e-169 597.8 569 56.4
Hund05954 Selenicereus undatus HOM05D005206 ORTHO05D006219 1.4e-168 597.0 571 59.0
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 2.7e-164 582.8 531 58.9
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.4e-160 569.7 524 58.6
unitig_748.g7742 Utricularia gibba HOM05D005206 ORTHO05D006219 1.3e-155 553.9 414 67.6
FAN12G3075 Fragaria x ananassa HOM05D005206 ORTHO05D006219 7.4e-154 548.1 551 55.9
Prupe.1G259900 Prunus persica HOM05D005206 ORTHO05D006219 3.5e-148 529.3 424 63.4
AagrBONN_evm.TU.Sc2ySwM_344.2272 Anthoceros agrestis HOM05D005206 ORTHO05D006219 2.4e-144 516.5 531 51.0
Pp3c15_19010 Physcomitrium patens HOM05D005206 ORTHO05D006219 5.1e-139 498.8 555 48.3
MD16G1086700 Malus domestica HOM05D005206 ORTHO05D006219 2.2e-137 493.4 271 85.2
AL1G24280 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 1.9e-133 480.3 275 82.5
Mapoly0057s0101 Marchantia polymorpha HOM05D005206 ORTHO05D006219 2.8e-121 439.9 465 52.7
Oeu025446.1 Olea europaea HOM05D005206 ORTHO05D006219 8.2e-121 438.3 378 61.9
SMO353G0008 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 1.0e-118 431.4 342 61.1
QL03p062590 Quercus lobata HOM05D005206 ORTHO05D006219 2.2e-118 430.3 531 49.0
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 3.0e-115 419.9 519 47.6
CBR_g3482 Chara braunii HOM05D005206 ORTHO05D006219 1.0e-110 404.8 320 58.8
Cc11_g14230 Coffea canephora HOM05D005206 ORTHO05D006219 8.3e-105 385.2 372 58.6
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 6.1e-100 369.0 217 77.0
SHI08107 Sapria himalayana HOM05D005206 ORTHO05D006219 7.0e-96 355.5 404 51.2
Cc11_g14240 Coffea canephora HOM05D005206 ORTHO05D006219 1.0e-91 341.7 186 84.9
PGSC0003DMG400015600 Solanum tuberosum HOM05D005206 ORTHO05D006219 6.8e-91 339.0 186 85.5
FAN07G1959 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.0e-90 337.4 270 63.7
HPP92_017067 Vanilla planifolia HOM05D005206 ORTHO05D006219 5.8e-90 335.9 394 50.8
Mapoly0078s0005 Marchantia polymorpha HOM05D005206 ORTHO05D006219 3.6e-84 316.6 524 36.6
CBR_g48616 Chara braunii HOM05D005206 ORTHO05D006219 5.4e-80 302.8 500 36.6
FAN17G0295 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.0e-78 298.5 299 54.8
AagrBONN_evm.TU.Sc2ySwM_362.251 Anthoceros agrestis HOM05D005206 ORTHO05D006219 9.5e-77 292.0 490 37.3
Cpa.g.sc5.344 Carica papaya HOM05D005206 ORTHO05D006219 4.7e-76 289.7 270 59.3
HPP92_017072 Vanilla planifolia HOM05D005206 ORTHO05D006219 4.7e-76 289.7 173 77.5
SMO235G0045 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 6.0e-71 272.7 313 43.1
MD16G1086600 Malus domestica HOM05D005206 ORTHO05D006219 1.3e-65 255.0 268 54.1
SMO347G0124 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 3.8e-65 253.4 314 41.1
VMungo0464G1917 Vigna mungo HOM05D005206 ORTHO05D006219 4.6e-63 246.5 267 53.9
Cpa.g.sc5.345 Carica papaya HOM05D005206 ORTHO05D006219 6.6e-62 242.7 140 80.7
Cpa.g.sc5.348 Carica papaya HOM05D005206 ORTHO05D006219 7.1e-56 222.6 112 92.0
AUR62026578 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.2e-55 221.9 285 50.2
HPP92_017071 Vanilla planifolia HOM05D005206 ORTHO05D006219 4.9e-41 173.3 244 46.3
Cfa026399 Carpinus fangiana HOM05D005206 ORTHO05D006219 3.2e-40 170.6 356 30.9
PRCOL_00003765 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 3.0e-38 164.1 369 28.2
VMungo0464G2026 Vigna mungo HOM05D005206 ORTHO05D006219 3.3e-37 160.6 93 81.7
SHI08109 Sapria himalayana HOM05D005206 ORTHO05D006219 1.3e-36 158.7 124 62.1
MCO16G526 Micromonas commoda HOM05D005206 ORTHO05D006219 5.8e-34 149.8 380 28.9
FvH4_6g23350 Fragaria vesca HOM05D005206 ORTHO05D006219 6.7e-30 136.3 82 75.6
FvH4_5g07370 Fragaria vesca HOM05D003058 ORTHO05D003464 7.2e-24 116.3 99 59.6
RcHm_v2.0_Chr3g0484611 Rosa chinensis HOM05D005206 ORTHO05D006219 7.4e-21 106.3 62 77.4
Cre17.g716101 Chlamydomonas reinhardtii HOM05D005206 ORTHO05D006219 2.2e-17 94.7 204 30.9
Ca_04200_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 6.7e-14 83.2 55 69.1
HPP92_017068 Vanilla planifolia HOM05D005206 ORTHO05D006219 8.8e-14 82.8 60 61.7
RcHm_v2.0_Chr4g0401081 Rosa chinensis HOM05D005206 ORTHO05D006219 1.2e-07 62.4 45 64.4
FvH4_6g44671 Fragaria vesca HOM05D005206 ORTHO05D006219 5.2e-06 57.0 35 80.0


User provided reference genes

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