Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.6287 Avicennia marina HOM05D004558 ORTHO05D005647 3.3e-223 778.1 407 100.0
Oeu060750.2 Olea europaea HOM05D004558 ORTHO05D005647 2.2e-203 712.2 418 86.1
SGA_v2.0_scaffold66G22316 Striga asiatica HOM05D004558 ORTHO05D005647 1.0e-200 703.4 410 86.6
Migut.K00174 Erythranthe guttata HOM05D004558 ORTHO05D005647 3.0e-200 701.8 408 85.3
arahy.Tifrunner.gnm1.ann1.VDKY5W Arachis hypogaea HOM05D004558 ORTHO05D005647 4.0e-200 701.4 410 85.4
arahy.Tifrunner.gnm1.ann1.XE2WF0 Arachis hypogaea HOM05D004558 ORTHO05D005647 1.5e-199 699.5 412 87.6
Thecc.05G130200 Theobroma cacao HOM05D004558 ORTHO05D005647 5.7e-199 697.6 407 86.0
Aqoxy2G00035_Aqoxy2G00036 Aquilegia oxysepala HOM05D004558 ORTHO05D005647 1.3e-198 696.4 407 85.3
Duzib093G1273 Durio zibethinus HOM05D004558 ORTHO05D005647 3.7e-198 694.9 408 85.8
Cpa.g.sc92.57 Carica papaya HOM05D004558 ORTHO05D005647 4.8e-198 694.5 409 84.8
Gohir.A01G192400 Gossypium hirsutum HOM05D004558 ORTHO05D005647 6.3e-198 694.1 408 85.5
VMungo1383G3341 Vigna mungo HOM05D004558 ORTHO05D005647 8.3e-198 693.7 408 85.3
QL07p015188 Quercus lobata HOM05D004558 ORTHO05D005647 1.8e-197 692.6 411 87.1
Duzib128G1152 Durio zibethinus HOM05D004558 ORTHO05D005647 2.4e-197 692.2 407 85.3
Cfa019915 Carpinus fangiana HOM05D004558 ORTHO05D005647 3.1e-197 691.8 408 84.8
Gohir.D01G177500 Gossypium hirsutum HOM05D004558 ORTHO05D005647 3.1e-197 691.8 408 88.0
CiPaw.09G162600 Carya illinoinensis HOM05D004558 ORTHO05D005647 4.1e-197 691.4 404 84.9
ClCG04G004930 Citrullus lanatus HOM05D004558 ORTHO05D005647 4.1e-197 691.4 411 84.4
Nitab4.5_0000123g0170 Nicotiana tabacum HOM05D004558 ORTHO05D005647 4.1e-197 691.4 411 84.7
TWI53G2040 Tripterygium wilfordii HOM05D004558 ORTHO05D005647 4.1e-197 691.4 409 84.8
Nitab4.5_0001270g0120 Nicotiana tabacum HOM05D004558 ORTHO05D005647 5.4e-197 691.0 407 85.3
Haze_20335 Corylus avellana HOM05D004558 ORTHO05D005647 7.0e-197 690.6 408 85.0
Prupe.7G022500 Prunus persica HOM05D004558 ORTHO05D005647 1.6e-196 689.5 422 82.7
Potri.006G027300 Populus trichocarpa HOM05D004558 ORTHO05D005647 2.7e-196 688.7 408 85.3
unitig_46.g18485 Utricularia gibba HOM05D004558 ORTHO05D005647 2.7e-196 688.7 409 86.6
Hund24509 Selenicereus undatus HOM05D004558 ORTHO05D005647 3.5e-196 688.3 408 85.0
CANSAT78G1575 Cannabis sativa HOM05D004558 ORTHO05D005647 4.5e-196 688.0 408 87.5
Lj1g0019045 Lotus japonicus HOM05D004558 ORTHO05D005647 4.5e-196 688.0 404 84.7
Potri.016G025000 Populus trichocarpa HOM05D004558 ORTHO05D005647 7.7e-196 687.2 408 85.5
Phvul.001G108700 Phaseolus vulgaris HOM05D004558 ORTHO05D005647 1.0e-195 686.8 409 84.6
Sabra16G0030900 Salix brachista HOM05D004558 ORTHO05D005647 1.0e-195 686.8 408 85.3
TWI77G0093 Tripterygium wilfordii HOM05D004558 ORTHO05D005647 1.0e-195 686.8 409 83.9
Ciclev10011842m.g Citrus clementina HOM05D004558 ORTHO05D005647 1.7e-195 686.0 418 83.5
Eucgr.A02177 Eucalyptus grandis HOM05D004558 ORTHO05D005647 1.7e-195 686.0 407 84.8
AUR62020990 Chenopodium quinoa HOM05D004558 ORTHO05D005647 2.3e-195 685.6 409 83.4
Glyma.03G119500 Glycine max HOM05D004558 ORTHO05D005647 2.3e-195 685.6 407 85.7
Cc06_g22740 Coffea canephora HOM05D004558 ORTHO05D005647 2.9e-195 685.3 422 83.2
CsaV3_4G031720 Cucumis sativus L. HOM05D004558 ORTHO05D005647 2.9e-195 685.3 411 83.7
Sc19g0007850 Simmondsia chinensis HOM05D004558 ORTHO05D005647 2.9e-195 685.3 407 84.0
TPR.G23197 Trifolium pratense HOM05D004558 ORTHO05D005647 5.0e-195 684.5 407 83.3
Gorai.002G225700 Gossypium raimondii HOM05D004558 ORTHO05D005647 8.6e-195 683.7 417 86.1
AUR62018443 Chenopodium quinoa HOM05D004558 ORTHO05D005647 1.5e-194 682.9 409 83.1
FAN19G1019 Fragaria x ananassa HOM05D004558 ORTHO05D005647 1.9e-194 682.6 409 84.4
Sabra06G0020200 Salix brachista HOM05D004558 ORTHO05D005647 3.3e-194 681.8 407 83.5
THA.LOC104824384 Tarenaya hassleriana HOM05D004558 ORTHO05D005647 4.2e-194 681.4 407 84.0
FAN23G1063 Fragaria x ananassa HOM05D004558 ORTHO05D005647 5.5e-194 681.0 406 84.7
Lalb_Chr14g0365301 Lupinus albus HOM05D004558 ORTHO05D005647 5.5e-194 681.0 408 83.3
PGR042G2423 Punica granatum HOM05D004558 ORTHO05D005647 7.2e-194 680.6 409 83.4
PGSC0003DMG400007188 Solanum tuberosum HOM05D004558 ORTHO05D005647 1.2e-193 679.9 410 85.4
FvH4_1g28960 Fragaria vesca HOM05D004558 ORTHO05D005647 2.1e-193 679.1 406 84.5
FAN28G2842 Fragaria x ananassa HOM05D004558 ORTHO05D005647 2.1e-193 679.1 406 84.5
CAN.G959.37 Capsicum annuum HOM05D004558 ORTHO05D005647 2.8e-193 678.7 407 86.0
Sed0025713 Sechium edule HOM05D004558 ORTHO05D005647 2.8e-193 678.7 411 84.2
FAN26G0634 Fragaria x ananassa HOM05D004558 ORTHO05D005647 3.6e-193 678.3 406 84.5
Sopen10g028720 Solanum pennellii HOM05D004558 ORTHO05D005647 3.6e-193 678.3 410 85.1
TAR369G0680 Trochodendron aralioides HOM05D004558 ORTHO05D005647 3.6e-193 678.3 407 84.3
RcHm_v2.0_Chr3g0494361 Rosa chinensis HOM05D004558 ORTHO05D005647 4.7e-193 677.9 406 83.7
MBI13_g30268_MAGBIO Magnolia biondii HOM05D004558 ORTHO05D005647 6.1e-193 677.6 407 82.8
Solyc10g077040.2 Solanum lycopersicum HOM05D004558 ORTHO05D005647 1.0e-192 676.8 410 84.9
Medtr7g088340 Medicago truncatula HOM05D004558 ORTHO05D005647 1.4e-192 676.4 410 86.1
Aa31LG10G11840 Aethionema arabicum HOM05D004558 ORTHO05D005647 1.8e-192 676.0 408 82.8
THA.LOC104803235 Tarenaya hassleriana HOM05D004558 ORTHO05D005647 1.8e-192 676.0 407 82.6
GSVIVG01025841001 Vitis vinifera HOM05D004558 ORTHO05D005647 3.0e-192 675.2 353 93.8
TAR546G0001 Trochodendron aralioides HOM05D004558 ORTHO05D005647 8.9e-192 673.7 407 83.5
Manes.09G073800 Manihot esculenta HOM05D004558 ORTHO05D005647 1.2e-191 673.3 408 83.3
BcaC07g40007 Brassica carinata HOM05D004558 ORTHO05D005647 1.5e-191 672.9 410 82.7
A09p49810 Brassica napus HOM05D004558 ORTHO05D005647 1.5e-191 672.9 410 84.9
BraA09t40434Z Brassica rapa HOM05D004558 ORTHO05D005647 1.5e-191 672.9 410 84.9
ATR1096G103 Amborella trichopoda HOM05D004558 ORTHO05D005647 2.6e-191 672.2 408 83.6
Oeu023011.1 Olea europaea HOM05D004558 ORTHO05D005647 3.4e-191 671.8 366 90.4
PSO384G3158 Papaver somniferum HOM05D004558 ORTHO05D005647 4.4e-191 671.4 407 82.3
BcaC07g40105 Brassica carinata HOM05D004558 ORTHO05D005647 9.8e-191 670.2 412 84.0
ECA247G1747 Erigeron canadensis HOM05D004558 ORTHO05D005647 1.3e-190 669.8 410 82.0
BraA07t29976Z Brassica rapa HOM05D004558 ORTHO05D005647 2.8e-190 668.7 412 82.5
PSO339G0825 Papaver somniferum HOM05D004558 ORTHO05D005647 2.8e-190 668.7 407 81.8
BcaC08g44811 Brassica carinata HOM05D004558 ORTHO05D005647 3.7e-190 668.3 412 82.0
BolC6t37555H Brassica oleracea HOM05D004558 ORTHO05D005647 3.7e-190 668.3 412 82.3
CSS0026074 Camellia sinensis var. sinensis HOM05D004558 ORTHO05D005647 3.7e-190 668.3 407 85.0
CSS0045826 Camellia sinensis var. sinensis HOM05D004558 ORTHO05D005647 3.7e-190 668.3 407 85.0
DCAR_016944 Daucus carota HOM05D004558 ORTHO05D005647 3.7e-190 668.3 407 82.8
Thhalv10006009m.g Eutrema salsugineum HOM05D004558 ORTHO05D005647 3.7e-190 668.3 410 83.9
Peaxi162Scf00003g05355 Petunia axillaris HOM05D004558 ORTHO05D005647 4.9e-190 667.9 429 80.2
A07p23140 Brassica napus HOM05D004558 ORTHO05D005647 8.3e-190 667.2 412 82.3
BcaB02g07634 Brassica carinata HOM05D004558 ORTHO05D005647 1.4e-189 666.4 412 82.5
DCAR_013513 Daucus carota HOM05D004558 ORTHO05D005647 1.8e-189 666.0 407 82.1
Actinidia00883 Actinidia chinensis HOM05D004558 ORTHO05D005647 2.4e-189 665.6 416 83.4
Carub.0005s2368 Capsella rubella HOM05D004558 ORTHO05D005647 2.4e-189 665.6 410 83.7
Lj1A1078T64 Lonicera japonica HOM05D004558 ORTHO05D005647 2.4e-189 665.6 410 85.1
Rhsim04G0119100 Rhododendron simsii HOM05D004558 ORTHO05D005647 4.1e-189 664.8 410 85.9
CARHR167090 Cardamine hirsuta HOM05D004558 ORTHO05D005647 5.4e-189 664.5 410 82.7
HanXRQChr10g0291961 Helianthus annuus HOM05D004558 ORTHO05D005647 5.4e-189 664.5 409 84.8
vmacro08967 Vaccinium macrocarpon HOM05D004558 ORTHO05D005647 5.4e-189 664.5 405 85.4
Actinidia38207 Actinidia chinensis HOM05D004558 ORTHO05D005647 7.0e-189 664.1 410 84.4
Lsat_1_v5_gn_9_30221 Lactuca sativa HOM05D004558 ORTHO05D005647 2.7e-188 662.1 415 82.2
Zm00001eb129000 Zea mays HOM05D004558 ORTHO05D005647 8.6e-187 657.1 353 90.1
HPP92_000696 Vanilla planifolia HOM05D004558 ORTHO05D005647 1.1e-186 656.8 353 90.4
Zm00001eb332650 Zea mays HOM05D004558 ORTHO05D005647 1.1e-186 656.8 353 90.1
Hma1.2p1_0251F.1_g102500 Hydrangea macrophylla HOM05D004558 ORTHO05D005647 1.5e-186 656.4 353 90.7
CDE02G2354 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 2.5e-186 655.6 407 80.3
C06p23840 Brassica napus HOM05D004558 ORTHO05D005647 3.3e-186 655.2 416 80.8
Rhsim04G0119000 Rhododendron simsii HOM05D004558 ORTHO05D005647 3.3e-186 655.2 424 83.0
AL5G38370 Arabidopsis lyrata HOM05D004558 ORTHO05D005647 1.6e-185 652.9 406 84.2
Sp5g05650 Schrenkiella parvula HOM05D004558 ORTHO05D005647 1.6e-185 652.9 353 90.7
Os01g0279100 Oryza sativa ssp. japonica HOM05D004558 ORTHO05D005647 2.1e-185 652.5 408 80.4
Lalb_Chr24g0400681 Lupinus albus HOM05D004558 ORTHO05D005647 4.7e-185 651.4 408 78.9
SEGI_29193 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 3.4e-183 645.2 353 88.4
unitig_37.g12773 Utricularia gibba HOM05D004558 ORTHO05D005647 5.4e-181 637.9 376 87.5
AT3G56940 Arabidopsis thaliana HOM05D004558 ORTHO05D005647 5.8e-175 617.8 333 89.8
Mapoly0124s0017 Marchantia polymorpha HOM05D004558 ORTHO05D005647 1.3e-174 616.7 353 84.1
Pp3c11_7910 Physcomitrium patens HOM05D004558 ORTHO05D005647 3.7e-174 615.1 353 83.6
SMO119G0375 Selaginella moellendorffii HOM05D004558 ORTHO05D005647 7.0e-173 610.9 353 83.3
EL10Ac3g07349 Beta vulgaris HOM05D004558 ORTHO05D005647 1.3e-171 606.7 409 78.7
AagrBONN_evm.TU.Sc2ySwM_228.50 Anthoceros agrestis HOM05D004558 ORTHO05D005647 1.5e-170 603.2 353 81.9
CDE04G3757 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 6.2e-169 597.8 408 75.0
SGA_v2.0_scaffold69G23196 Striga asiatica HOM05D004558 ORTHO05D005647 8.9e-168 594.0 403 76.7
Atru.chr1.1539 Acer truncatum HOM05D004558 ORTHO05D005647 6.8e-160 567.8 345 85.5
Ca_08344_v3 Cicer arietinum L. HOM05D004558 ORTHO05D005647 6.2e-153 544.7 337 85.2
Psat3g082520 Pisum sativum HOM05D004558 ORTHO05D005647 4.0e-152 542.0 321 86.6
PRCOL_00006479 Prasinoderma coloniale HOM05D004558 ORTHO05D005647 3.5e-148 528.9 353 72.2
Dinv11638 Davidia involucrata HOM05D004558 ORTHO05D005647 3.3e-146 522.3 320 83.1
Cre12.g510050 Chlamydomonas reinhardtii HOM05D004558 ORTHO05D005647 1.6e-145 520.0 348 71.0
Ah.04g150190 Amaranthus hybridus HOM05D004558 ORTHO05D005647 1.3e-142 510.4 404 67.6
Pp3c7_26570 Physcomitrium patens HOM05D004558 ORTHO05D005647 3.2e-141 505.8 266 90.2
HPP92_000650 Vanilla planifolia HOM05D004558 ORTHO05D005647 2.3e-139 499.6 257 92.6
MCO13G411 Micromonas commoda HOM05D004558 ORTHO05D005647 3.3e-138 495.7 345 70.7
SMO115G0161 Selaginella moellendorffii HOM05D004558 ORTHO05D005647 1.9e-133 479.9 353 68.3
MELO3C026802.2 Cucumis melo HOM05D004558 ORTHO05D005647 3.0e-131 472.6 291 82.1
Glyma.19G123800 Glycine max HOM05D004558 ORTHO05D005647 1.1e-130 470.7 291 84.9
Cre07.g346050 Chlamydomonas reinhardtii HOM05D004558 ORTHO05D005647 1.5e-130 470.3 344 66.3
SalBow6G0122 Salvia bowleyana HOM05D004558 ORTHO05D005647 2.1e-129 466.5 248 91.1
SalBow1G4785 Salvia bowleyana HOM05D004558 ORTHO05D005647 3.4e-119 432.6 285 77.5
CDE02G0342 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 2.0e-114 416.8 282 73.8
Oeu021019.1 Olea europaea HOM05D004558 ORTHO05D005647 1.1e-106 391.0 319 65.8
CBR_g50688 Chara braunii HOM05D004558 ORTHO05D005647 5.5e-101 372.1 232 76.7
BolC4t25242H Brassica oleracea HOM05D004558 ORTHO05D005647 7.5e-58 228.8 132 85.6
C04p35620 Brassica napus HOM05D004558 ORTHO05D005647 9.8e-58 228.4 132 84.8
CBR_g55376 Chara braunii HOM05D004558 ORTHO05D005647 2.1e-52 210.7 353 38.5
SEGI_05566 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 4.6e-47 193.0 118 79.7
SEGI_20922 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 6.0e-47 192.6 118 78.8
C08p32210 Brassica napus HOM05D004558 ORTHO05D005647 8.9e-43 178.7 104 87.5
A04p03620 Brassica napus HOM05D004558 ORTHO05D005647 5.8e-42 176.0 103 87.4
BraA04t16073Z Brassica rapa HOM05D004558 ORTHO05D005647 5.8e-42 176.0 103 87.4
Pp3c2_30650 Physcomitrium patens HOM05D004558 ORTHO05D005647 9.6e-37 158.7 102 78.4
BcaC02g09879 Brassica carinata HOM05D004558 ORTHO05D005647 2.1e-36 157.5 94 85.1
CDE02G4696 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 1.1e-32 145.2 94 75.5
BcaB02g08342 Brassica carinata HOM05D004558 ORTHO05D005647 6.9e-27 125.9 105 69.5
Ah.13g077400 Amaranthus hybridus HOM05D004558 ORTHO05D000435 2.2e-25 120.9 148 50.7
Lalb_Chr22g0357681 Lupinus albus HOM05D004558 ORTHO05D005647 1.1e-24 118.6 98 66.3
ClCG10G010310 Citrullus lanatus HOM05D004558 ORTHO05D005647 4.6e-23 113.2 71 71.8
AagrBONN_evm.TU.Sc2ySwM_368.2127 Anthoceros agrestis HOM05D004558 ORTHO05D005647 2.1e-20 104.4 59 83.1
Lalb_Chr22g0358091 Lupinus albus HOM05D004558 ORTHO05D005647 2.4e-19 100.9 47 91.5
MD00G1107700 Malus domestica HOM05D004558 ORTHO05D005647 2.4e-19 100.9 62 80.6
ClCG10G010320 Citrullus lanatus HOM05D004558 ORTHO05D005647 1.5e-18 98.2 81 64.2
AagrBONN_evm.TU.Sc2ySwM_344.4282 Anthoceros agrestis HOM05D004558 ORTHO05D000003 8.4e-17 92.4 59 78.0
SEGI_00644 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 7.4e-13 79.3 42 92.9
Lalb_Chr22g0358081 Lupinus albus HOM05D004558 ORTHO05D005647 3.1e-11 73.9 39 89.7
MSTRG.26191 Avicennia marina HOM05D004558 ORTHO05D087779 1.0e-09 68.9 53 69.8
Lalb_Chr22g0358071 Lupinus albus HOM05D004558 ORTHO05D239964 1.9e-08 64.7 81 53.1


User provided reference genes

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