Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.16978 Avicennia marina HOM05D006110 ORTHO05D007774 0.0e+00 1227.2 610 100.0
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 1.5e-296 1022.3 607 82.5
Dinv11233 Davidia involucrata HOM05D006110 ORTHO05D007774 3.2e-294 1014.6 586 85.8
Manes.04G156400 Manihot esculenta HOM05D006110 ORTHO05D007774 3.3e-291 1004.6 610 81.8
CiPaw.06G056300 Carya illinoinensis HOM05D006110 ORTHO05D007774 4.7e-290 1000.7 608 81.1
Prupe.7G006200 Prunus persica HOM05D006110 ORTHO05D007774 4.0e-289 997.7 608 81.2
QL04p021435 Quercus lobata HOM05D006110 ORTHO05D007774 6.8e-289 996.9 608 81.1
QL07p029279 Quercus lobata HOM05D006110 ORTHO05D007774 6.8e-289 996.9 608 81.1
COL.COLO4_06638 Corchorus olitorius HOM05D006110 ORTHO05D007774 2.6e-288 995.0 608 81.1
Migut.B01193 Erythranthe guttata HOM05D006110 ORTHO05D007774 3.5e-285 984.6 617 81.4
Atru.chr12.1309 Acer truncatum HOM05D006110 ORTHO05D007774 6.0e-285 983.8 608 80.1
Eucgr.E03954 Eucalyptus grandis HOM05D006110 ORTHO05D007774 1.5e-283 979.2 609 79.8
Rhsim07G0069200 Rhododendron simsii HOM05D006110 ORTHO05D007774 2.5e-283 978.4 648 77.3
Sed0024249 Sechium edule HOM05D006110 ORTHO05D007774 3.3e-283 978.0 603 79.4
CsaV3_5G023770 Cucumis sativus L. HOM05D006110 ORTHO05D007774 4.3e-283 977.6 606 79.4
GSVIVG01036631001 Vitis vinifera HOM05D006110 ORTHO05D007774 4.3e-283 977.6 608 79.9
Peaxi162Scf00220g00411 Petunia axillaris HOM05D006110 ORTHO05D007774 2.8e-282 974.9 605 79.8
MELO3C022813.2 Cucumis melo HOM05D006110 ORTHO05D007774 8.1e-282 973.4 606 78.9
GSVIVG01036611001 Vitis vinifera HOM05D006110 ORTHO05D007774 8.1e-282 973.4 608 79.6
Ciclev10000631m.g Citrus clementina HOM05D006110 ORTHO05D007774 1.4e-281 972.6 608 79.3
Duzib106G1787 Durio zibethinus HOM05D006110 ORTHO05D007774 4.0e-281 971.1 623 78.7
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 2.0e-280 968.8 607 78.6
RcHm_v2.0_Chr1g0327151 Rosa chinensis HOM05D006110 ORTHO05D007774 5.8e-280 967.2 614 78.8
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 1.7e-279 965.7 608 78.9
CAN.G134.27 Capsicum annuum HOM05D006110 ORTHO05D007774 2.9e-279 964.9 607 79.7
Solyc01g096600.4 Solanum lycopersicum HOM05D006110 ORTHO05D007774 2.9e-279 964.9 587 81.6
Sopen01g040330 Solanum pennellii HOM05D006110 ORTHO05D007774 6.4e-279 963.8 589 81.3
CANSAT56G0825 Cannabis sativa HOM05D006110 ORTHO05D007774 1.2e-277 959.5 609 78.3
MD14G1003800 Malus domestica HOM05D006110 ORTHO05D007774 4.6e-277 957.6 610 79.5
Glyma.04G133800 Glycine max HOM05D006110 ORTHO05D007774 5.1e-276 954.1 608 78.5
FAN03G2625 Fragaria x ananassa HOM05D006110 ORTHO05D007774 2.5e-275 951.8 608 78.9
EL10Ac7g17197 Beta vulgaris HOM05D006110 ORTHO05D007774 1.1e-273 946.4 607 77.6
THA.LOC104826748 Tarenaya hassleriana HOM05D006110 ORTHO05D007774 2.0e-272 942.2 600 77.0
ECA233G5267 Erigeron canadensis HOM05D006110 ORTHO05D007774 2.6e-272 941.8 611 77.9
Potri.001G031700 Populus trichocarpa HOM05D006110 ORTHO05D007774 2.6e-272 941.8 608 77.1
FvH4_7g03810 Fragaria vesca HOM05D006110 ORTHO05D007774 5.8e-272 940.6 610 77.9
Potri.003G194000 Populus trichocarpa HOM05D006110 ORTHO05D007774 1.7e-271 939.1 608 76.5
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea HOM05D006110 ORTHO05D007774 3.8e-271 937.9 606 77.6
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea HOM05D006110 ORTHO05D007774 8.4e-271 936.8 606 77.4
Lj3g0023685 Lotus japonicus HOM05D006110 ORTHO05D007774 1.9e-270 935.6 608 77.0
Psat5g221960 Pisum sativum HOM05D006110 ORTHO05D007774 1.9e-270 935.6 602 77.2
FAN10G4343 Fragaria x ananassa HOM05D006110 ORTHO05D007774 2.4e-270 935.3 620 77.3
CSS0009585 Camellia sinensis var. sinensis HOM05D006110 ORTHO05D007774 1.3e-268 929.5 591 80.2
HanXRQChr02g0048711 Helianthus annuus HOM05D006110 ORTHO05D007774 8.7e-268 926.8 604 76.7
Phvul.005G004500 Phaseolus vulgaris HOM05D006110 ORTHO05D007774 1.1e-267 926.4 585 78.3
Actinidia07968 Actinidia chinensis HOM05D006110 ORTHO05D007774 4.8e-266 921.0 526 85.6
FAN06G2813 Fragaria x ananassa HOM05D006110 ORTHO05D007774 6.2e-266 920.6 635 74.6
vmacro13769 Vaccinium macrocarpon HOM05D006110 ORTHO05D007774 3.1e-265 918.3 697 69.2
Gohir.A05G399300 Gossypium hirsutum HOM05D006110 ORTHO05D007774 2.0e-264 915.6 610 75.9
Gorai.012G019300 Gossypium raimondii HOM05D006110 ORTHO05D007774 2.0e-264 915.6 610 75.7
TPR.G7074 Trifolium pratense HOM05D006110 ORTHO05D007774 3.4e-264 914.8 603 76.5
Lalb_Chr20g0109671 Lupinus albus HOM05D006110 ORTHO05D007774 1.3e-260 902.9 608 75.5
Lalb_Chr20g0109811 Lupinus albus HOM05D006110 ORTHO05D007774 8.7e-260 900.2 608 75.3
Lsat_1_v5_gn_6_13001 Lactuca sativa HOM05D006110 ORTHO05D007774 2.5e-259 898.7 532 82.5
Sc17g0003940 Simmondsia chinensis HOM05D006110 ORTHO05D007774 2.5e-259 898.7 550 80.4
TAR625G0603 Trochodendron aralioides HOM05D006110 ORTHO05D007774 3.3e-259 898.3 585 76.8
AL6G20270 Arabidopsis lyrata HOM05D006110 ORTHO05D007774 9.6e-259 896.7 602 74.6
Gohir.D04G016600 Gossypium hirsutum HOM05D006110 ORTHO05D007774 1.1e-257 893.3 610 74.6
COL.COLO4_19610 Corchorus olitorius HOM05D006110 ORTHO05D007774 1.5e-256 889.4 635 72.1
Nn8g38623 Nelumbo nucifera HOM05D006110 ORTHO05D007774 2.0e-256 889.0 608 73.7
AT5G09860 Arabidopsis thaliana HOM05D006110 ORTHO05D007774 3.4e-256 888.3 605 74.0
Aa31LG1G21560 Aethionema arabicum HOM05D006110 ORTHO05D007774 1.0e-255 886.7 613 72.3
PGR031G3177 Punica granatum HOM05D006110 ORTHO05D007774 1.0e-255 886.7 576 76.6
SalBow5G1256 Salvia bowleyana HOM05D006110 ORTHO05D007774 1.0e-255 886.7 620 75.5
CARHR203490 Cardamine hirsuta HOM05D006110 ORTHO05D007774 4.2e-254 881.3 602 74.3
Oeu014626.1 Olea europaea HOM05D006110 ORTHO05D007774 1.2e-253 879.8 517 84.3
Aqoxy3G04239 Aquilegia oxysepala HOM05D006110 ORTHO05D007774 5.7e-251 870.9 590 74.6
Sabra01G0022800 Salix brachista HOM05D006110 ORTHO05D007774 5.7e-251 870.9 777 60.6
MBI03_g05118_MAGBIO Magnolia biondii HOM05D006110 ORTHO05D007774 1.6e-250 869.4 590 73.6
Carub.0006s0829 Capsella rubella HOM05D006110 ORTHO05D007774 2.2e-250 869.0 604 73.2
SGA_v2.0_scaffold342G49409 Striga asiatica HOM05D006110 ORTHO05D007774 1.1e-249 866.7 664 71.1
A02p00200 Brassica napus HOM05D006110 ORTHO05D007774 7.7e-248 860.5 607 71.7
BcaB05g21524 Brassica carinata HOM05D006110 ORTHO05D007774 9.4e-246 853.6 601 71.4
C02p04120 Brassica napus HOM05D006110 ORTHO05D007774 2.3e-244 849.0 618 70.1
BraA02t05004Z Brassica rapa HOM05D006110 ORTHO05D007774 8.8e-244 847.0 617 69.9
Sp6g33550 Schrenkiella parvula HOM05D006110 ORTHO05D007774 8.8e-244 847.0 602 71.6
Thhalv10013059m.g Eutrema salsugineum HOM05D006110 ORTHO05D007774 1.1e-243 846.7 601 72.0
BolC2t06374H Brassica oleracea HOM05D006110 ORTHO05D007774 7.4e-243 844.0 622 69.3
Nn3g19142 Nelumbo nucifera HOM05D006110 ORTHO05D007774 1.3e-242 843.2 510 80.0
PSO782G1399 Papaver somniferum HOM05D006110 ORTHO05D007774 1.3e-242 843.2 587 73.1
PSO063G0799 Papaver somniferum HOM05D006110 ORTHO05D007774 3.7e-242 841.6 587 72.6
ATR0618G428 Amborella trichopoda HOM05D006110 ORTHO05D007774 8.2e-242 840.5 591 72.1
unitig_26.g9755 Utricularia gibba HOM05D006110 ORTHO05D007774 3.1e-241 838.6 591 73.6
Ah.08g212940 Amaranthus hybridus HOM05D006110 ORTHO05D007774 1.0e-239 833.6 612 70.3
BcaC03g13281 Brassica carinata HOM05D006110 ORTHO05D007774 4.7e-237 824.7 603 69.7
Os03g0110400 Oryza sativa ssp. japonica HOM05D006110 ORTHO05D007774 1.4e-233 813.1 593 68.8
AUR62033702 Chenopodium quinoa HOM05D006110 ORTHO05D007774 3.8e-231 805.1 738 59.6
Nitab4.5_0002838g0090 Nicotiana tabacum HOM05D006110 ORTHO05D007774 1.1e-230 803.5 520 78.1
CDE05G1199 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 2.6e-227 792.3 578 69.9
Zm00001eb000780 Zea mays HOM05D006110 ORTHO05D007774 7.2e-222 774.2 591 67.5
Thecc.10G142600 Theobroma cacao HOM05D006110 ORTHO05D007774 6.5e-215 751.1 458 80.8
AUR62036785 Chenopodium quinoa HOM05D006110 ORTHO05D007774 7.5e-211 737.6 610 64.3
SMO134G0202 Selaginella moellendorffii HOM05D006110 ORTHO05D007774 5.0e-207 724.9 525 67.6
Cc00_g06110 Coffea canephora HOM05D006110 ORTHO05D007774 1.5e-206 723.4 470 78.1
AagrBONN_evm.TU.Sc2ySwM_228.3473 Anthoceros agrestis HOM05D006110 ORTHO05D007774 4.4e-203 711.8 599 61.6
Mapoly0007s0076 Marchantia polymorpha HOM05D006110 ORTHO05D007774 2.9e-199 699.1 576 62.7
AagrBONN_evm.TU.Sc2ySwM_228.3474 Anthoceros agrestis HOM05D006110 ORTHO05D007774 2.8e-197 692.6 578 62.6
Pp3c2_4660 Physcomitrium patens HOM05D006110 ORTHO05D007774 1.5e-195 686.8 557 63.4
ClCG05G014210 Citrullus lanatus HOM05D006110 ORTHO05D007774 6.8e-180 634.8 449 72.2
TPR.G1403 Trifolium pratense HOM05D006110 ORTHO05D007774 6.6e-167 591.7 395 74.7
DCAR_022366 Daucus carota HOM05D006110 ORTHO05D007774 8.7e-159 564.7 401 72.1
Lj9C658T8 Lonicera japonica HOM05D006110 ORTHO05D007774 6.5e-138 495.4 287 87.8
HPP92_005051 Vanilla planifolia HOM05D006110 ORTHO05D007774 3.4e-131 473.0 334 71.9
Cpa.g.sc51.83 Carica papaya HOM05D006110 ORTHO05D007774 1.4e-127 461.1 270 80.4
SEGI_32708 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 4.1e-124 449.5 309 72.8
CBR_g45491 Chara braunii HOM05D006110 ORTHO05D007774 2.0e-123 447.2 558 46.4
Nitab4.5_0004168g0080 Nicotiana tabacum HOM05D006110 ORTHO05D007774 9.1e-116 421.8 344 66.9
Hund12548 Selenicereus undatus HOM05D006110 ORTHO05D007774 2.2e-101 374.0 284 66.2
Hund24435 Selenicereus undatus HOM05D006110 ORTHO05D007774 9.1e-100 368.6 259 74.1
HPP92_005075 Vanilla planifolia HOM05D006110 ORTHO05D007774 1.2e-88 331.6 283 59.4
Lj9A658T58 Lonicera japonica HOM05D006110 ORTHO05D007774 4.1e-84 316.6 224 75.4
Sed0017067 Sechium edule HOM05D006110 ORTHO05D007774 4.1e-84 316.6 187 82.9
CANSAT01G0073 Cannabis sativa HOM05D006110 ORTHO05D007774 4.3e-73 280.0 181 76.2
PRCOL_00001172 Prasinoderma coloniale HOM05D006110 ORTHO05D007774 7.3e-73 279.3 444 37.4
Oeu014625.1 Olea europaea HOM05D006110 ORTHO05D007774 2.5e-57 227.6 162 74.1
Cc00_g06120 Coffea canephora HOM05D006110 ORTHO05D007774 7.3e-57 226.1 133 82.7
CANSAT01G1515 Cannabis sativa HOM05D006110 ORTHO05D007774 7.6e-54 216.1 108 88.0
CDE05G0354 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 1.9e-52 211.5 370 38.4
ClCG05G014240 Citrullus lanatus HOM05D006110 ORTHO05D007774 9.3e-52 209.1 186 60.2
SEGI_24206 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 3.5e-51 207.2 189 59.3
CDE05G3545 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 2.0e-46 191.4 137 70.1
Actinidia06221 Actinidia chinensis HOM05D006110 ORTHO05D007774 7.4e-41 172.9 173 58.4
SEGI_05467 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 4.8e-40 170.2 109 67.9
Lj9C658T10 Lonicera japonica HOM05D006110 ORTHO05D007774 7.4e-25 119.8 66 78.8
Cre16.g695300 Chlamydomonas reinhardtii HOM05D006110 ORTHO05D007774 6.3e-24 116.7 268 30.6
GSVIVG01036616001 Vitis vinifera HOM05D006110 ORTHO05D007774 7.7e-06 56.6 64 53.1


User provided reference genes

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