Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 1.1e-109 400.2 237 100.0
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 7.2e-61 238.0 191 79.6
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 6.1e-60 235.0 191 78.5
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 4.4e-58 228.8 218 72.5
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 2.2e-57 226.5 191 77.0
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 2.8e-57 226.1 191 75.9
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 1.8e-56 223.4 214 71.5
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.2e-55 220.7 191 77.0
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 3.5e-55 219.2 193 73.1
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 3.5e-55 219.2 193 75.6
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 5.0e-54 215.3 194 72.7
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 1.1e-53 214.2 194 72.2
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 1.2e-52 210.7 191 70.2
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 2.1e-52 209.9 193 73.6
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 2.1e-52 209.9 191 73.3
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 3.6e-52 209.1 192 72.4
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 3.6e-52 209.1 192 73.4
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 6.1e-52 208.4 191 73.3
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 6.1e-52 208.4 192 74.0
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 1.0e-51 207.6 193 70.5
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 1.4e-51 207.2 177 78.0
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 3.0e-51 206.1 191 72.3
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 4.0e-51 205.7 192 71.9
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 5.2e-51 205.3 192 71.4
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 8.9e-51 204.5 196 71.4
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 8.9e-51 204.5 239 62.3
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.2e-50 204.1 207 56.5
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 1.5e-50 203.8 200 70.5
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 1.5e-50 203.8 155 83.9
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 1.5e-50 203.8 192 70.3
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.6e-50 203.0 199 70.9
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 3.4e-50 202.6 194 69.6
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 3.4e-50 202.6 193 67.4
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 3.4e-50 202.6 192 71.9
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 5.7e-50 201.8 192 71.9
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 1.7e-49 200.3 191 72.3
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 2.2e-49 199.9 191 68.1
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 2.2e-49 199.9 192 71.9
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 3.7e-49 199.1 200 69.0
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 3.7e-49 199.1 197 70.1
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 3.7e-49 199.1 191 69.1
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 4.9e-49 198.7 194 69.1
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 4.9e-49 198.7 194 70.1
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 6.3e-49 198.4 200 68.5
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 1.4e-48 197.2 193 66.3
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 1.8e-48 196.8 192 71.4
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 1.8e-48 196.8 191 67.0
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 4.1e-48 195.7 193 71.5
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 4.1e-48 195.7 202 68.3
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 5.4e-48 195.3 166 77.1
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 5.4e-48 195.3 192 68.8
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 5.4e-48 195.3 191 68.6
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 7.0e-48 194.9 191 71.2
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 9.2e-48 194.5 193 69.9
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 9.2e-48 194.5 173 74.6
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 1.2e-47 194.1 196 68.4
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 1.6e-47 193.7 191 70.7
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 2.0e-47 193.4 188 70.2
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 2.0e-47 193.4 193 68.9
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 2.7e-47 193.0 165 77.0
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 2.7e-47 193.0 165 77.0
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 2.7e-47 193.0 195 69.7
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 3.5e-47 192.6 202 64.9
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 4.5e-47 192.2 193 67.4
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 4.5e-47 192.2 195 69.2
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 5.9e-47 191.8 249 59.4
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 5.9e-47 191.8 192 68.8
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 7.8e-47 191.4 176 71.0
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 1.0e-46 191.0 194 68.0
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 1.7e-46 190.3 191 64.9
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 1.7e-46 190.3 191 65.4
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 1.7e-46 190.3 192 66.7
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 1.7e-46 190.3 197 65.5
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 1.7e-46 190.3 193 66.3
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 2.3e-46 189.9 191 67.5
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 2.3e-46 189.9 191 64.9
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 2.3e-46 189.9 190 69.5
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 2.3e-46 189.9 191 69.6
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 2.9e-46 189.5 195 69.2
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 3.9e-46 189.1 191 66.0
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 3.9e-46 189.1 191 66.0
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 3.9e-46 189.1 195 69.2
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 5.0e-46 188.7 159 77.4
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 6.6e-46 188.3 197 68.0
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 6.6e-46 188.3 195 68.7
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 6.6e-46 188.3 192 66.7
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 8.6e-46 188.0 196 64.8
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 8.6e-46 188.0 191 69.1
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 1.1e-45 187.6 197 68.0
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 1.1e-45 187.6 191 70.2
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 1.1e-45 187.6 191 66.5
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 1.5e-45 187.2 191 63.9
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.5e-45 187.2 193 69.4
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 1.9e-45 186.8 193 67.4
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 1.9e-45 186.8 193 67.9
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 2.5e-45 186.4 193 66.3
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 2.5e-45 186.4 192 66.7
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 3.3e-45 186.0 191 65.4
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 3.3e-45 186.0 192 69.3
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 3.3e-45 186.0 197 68.0
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 4.3e-45 185.7 200 66.0
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 4.3e-45 185.7 191 69.1
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 5.6e-45 185.3 176 71.0
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 5.6e-45 185.3 191 64.4
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 7.3e-45 184.9 190 65.3
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 7.3e-45 184.9 191 64.9
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 7.3e-45 184.9 193 64.8
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 7.3e-45 184.9 191 64.9
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 7.3e-45 184.9 163 74.2
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 7.3e-45 184.9 191 66.5
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 1.2e-44 184.1 193 64.8
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 1.2e-44 184.1 193 64.8
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 1.2e-44 184.1 195 66.2
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 1.2e-44 184.1 189 69.3
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 1.2e-44 184.1 194 67.0
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 2.1e-44 183.3 194 66.5
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 2.1e-44 183.3 191 67.0
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 3.6e-44 182.6 195 64.1
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 3.6e-44 182.6 193 64.2
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 3.6e-44 182.6 193 64.2
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 3.1e-43 179.5 174 73.6
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 3.1e-43 179.5 192 67.2
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 4.0e-43 179.1 140 79.3
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 4.0e-43 179.1 187 67.4
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 5.2e-43 178.7 170 72.4
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 5.2e-43 178.7 152 78.3
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 6.8e-43 178.3 196 65.3
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 1.2e-42 177.6 197 65.5
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 4.4e-42 175.6 157 77.7
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 4.4e-42 175.6 190 63.2
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 4.4e-42 175.6 195 65.1
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 4.4e-42 175.6 174 69.0
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 5.8e-42 175.3 193 66.3
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 5.8e-42 175.3 193 66.3
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 1.7e-41 173.7 143 80.4
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 1.7e-41 173.7 188 67.0
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 2.9e-41 172.9 190 61.1
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 2.9e-41 172.9 199 63.3
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 2.9e-41 172.9 204 60.8
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 2.4e-40 169.9 166 72.3
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 3.2e-40 169.5 126 88.9
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 3.2e-40 169.5 143 78.3
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 2.0e-39 166.8 192 64.1
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 3.5e-39 166.0 126 69.8
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 2.3e-38 163.3 191 61.8
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 1.1e-37 161.0 197 60.9
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 1.5e-37 160.6 215 58.1
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 3.3e-37 159.5 125 87.2
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 1.6e-36 157.1 165 63.0
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 5.2e-35 152.1 127 83.5
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 5.2e-35 152.1 148 73.0
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 8.9e-35 151.4 126 64.3
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 2.0e-34 150.2 190 62.6
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 4.4e-34 149.1 128 72.7
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 7.5e-34 148.3 140 62.9
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 1.3e-33 147.5 100 76.0
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 1.4e-32 144.1 91 75.8
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 1.9e-32 143.7 142 67.6
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 2.7e-31 139.8 96 69.8
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 6.6e-30 135.2 123 55.3
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 1.9e-29 133.7 109 83.5
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 9.5e-29 131.3 122 59.0
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 3.6e-28 129.4 191 43.5
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.4e-27 127.5 97 94.8
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 2.3e-27 126.7 88 75.0
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 9.9e-26 121.3 97 88.7
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 1.2e-23 114.4 129 62.0
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 1.7e-22 110.5 143 55.2
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 8.6e-22 108.2 140 45.7
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 8.1e-20 101.7 58 82.8
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 3.4e-18 96.3 84 67.9
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 1.4e-16 90.9 77 84.4
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 7.8e-15 85.1 144 51.4
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 6.6e-14 82.0 96 64.6
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 3.6e-12 76.3 140 36.4
MCO02G269 Micromonas commoda HOM05D066820 ORTHO05D004315 5.1e-06 55.8 81 33.3


User provided reference genes

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