Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 8.0e-277 956.4 477 100.0
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 2.7e-192 675.6 492 69.7
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 1.0e-191 673.7 477 70.6
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 2.2e-189 666.0 476 69.3
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 1.4e-188 663.3 496 70.0
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 1.6e-187 659.8 476 67.4
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 3.5e-187 658.7 476 67.9
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 3.8e-186 655.2 480 68.8
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 5.5e-185 651.4 473 69.1
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 1.2e-184 650.2 482 68.0
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 2.7e-184 649.0 476 67.0
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 2.7e-184 649.0 476 67.6
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 1.4e-183 646.7 476 67.4
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.4e-183 646.7 479 67.8
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 8.8e-183 644.0 473 68.5
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 2.6e-182 642.5 476 67.2
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 2.8e-181 639.0 470 68.1
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 3.7e-181 638.6 481 66.9
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 5.3e-180 634.8 477 66.0
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 1.0e-178 630.6 476 64.9
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 1.3e-178 630.2 480 65.8
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 2.2e-178 629.4 478 65.5
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 2.2e-178 629.4 482 66.2
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 6.5e-178 627.9 481 65.9
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.1e-177 627.1 478 64.4
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 2.5e-177 625.9 480 65.8
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 7.2e-177 624.4 476 66.2
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 7.2e-177 624.4 478 65.1
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 3.6e-176 622.1 480 64.4
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 6.1e-176 621.3 488 63.9
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 6.1e-176 621.3 487 64.3
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 1.4e-175 620.2 478 65.1
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 3.0e-175 619.0 478 66.3
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 5.2e-175 618.2 480 64.8
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 6.8e-175 617.8 470 65.3
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 8.8e-175 617.5 484 64.7
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 1.5e-174 616.7 484 64.5
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 2.0e-174 616.3 487 64.1
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 2.0e-174 616.3 488 64.8
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 2.6e-174 615.9 474 65.8
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 2.6e-174 615.9 478 65.1
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 3.4e-174 615.5 488 63.9
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 5.7e-174 614.8 484 64.5
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 5.7e-174 614.8 477 63.7
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 9.8e-174 614.0 487 63.9
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 9.8e-174 614.0 487 63.9
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 9.8e-174 614.0 473 65.1
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 1.7e-173 613.2 476 64.5
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 6.3e-173 611.3 480 63.8
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 2.4e-172 609.4 483 62.9
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 2.4e-172 609.4 487 63.2
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 2.4e-172 609.4 489 64.0
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 3.1e-172 609.0 479 64.9
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 3.1e-172 609.0 477 64.6
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 7.0e-172 607.8 489 63.2
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 9.1e-172 607.4 489 63.2
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 9.1e-172 607.4 484 63.6
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 1.2e-171 607.1 475 64.0
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 3.5e-171 605.5 475 64.0
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 3.5e-171 605.5 478 63.8
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 4.5e-171 605.1 480 63.3
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 1.0e-170 604.0 477 63.1
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 1.7e-170 603.2 480 63.1
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 5.0e-170 601.7 476 62.2
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 2.5e-169 599.4 480 62.3
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 4.2e-169 598.6 480 62.3
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 2.1e-168 596.3 473 63.4
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 6.1e-168 594.7 476 62.8
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 6.1e-168 594.7 473 62.8
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 1.4e-167 593.6 475 61.3
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 4.0e-167 592.0 479 62.8
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 2.2e-165 586.3 489 62.6
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 2.0e-163 579.7 459 65.4
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 4.5e-163 578.6 476 61.3
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 1.5e-161 573.5 481 61.1
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 6.1e-160 568.2 481 61.5
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 6.4e-157 558.1 459 61.0
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 4.3e-153 545.4 467 59.3
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 3.6e-152 542.3 483 58.6
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 4.0e-151 538.9 384 66.9
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 1.4e-148 530.4 423 62.4
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 2.0e-147 526.6 494 56.7
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 5.2e-143 511.9 372 68.3
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 2.3e-130 469.9 319 72.4
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 2.1e-128 463.4 338 66.0
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 2.8e-128 463.0 473 49.3
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 8.9e-127 458.0 382 61.5
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 7.8e-123 444.9 456 48.5
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 1.7e-122 443.7 315 67.9
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 5.3e-111 405.6 481 44.1
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 1.2e-107 394.4 423 48.5
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 8.7e-98 361.7 271 67.2
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 4.3e-97 359.4 419 43.9
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 1.8e-95 354.0 387 45.7
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 1.8e-95 354.0 430 43.7
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 2.6e-94 350.1 255 68.2
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 4.5e-94 349.4 278 64.4
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 1.1e-92 344.7 360 49.4
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 6.1e-91 339.0 260 63.8
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 2.9e-85 320.1 319 55.2
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 5.5e-84 315.8 299 53.8
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 9.4e-84 315.1 238 63.0
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 2.7e-83 313.5 398 42.7
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 4.6e-83 312.8 442 40.5
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 5.0e-69 266.2 249 56.2
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 9.4e-68 261.9 210 60.0
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 4.8e-64 249.6 202 63.4
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 1.0e-58 231.9 222 55.9
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 1.3e-56 224.9 188 55.9
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 3.4e-49 200.3 189 57.1
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 1.8e-47 194.5 118 78.0
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 2.4e-47 194.1 118 77.1
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 4.3e-44 183.3 116 77.6
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 3.6e-27 127.1 115 55.7
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 2.3e-26 124.4 108 60.2
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 5.8e-25 119.8 99 63.6
Actinidia26749 Actinidia chinensis HOM05D006543 ORTHO05D008308 4.9e-08 63.5 89 46.1
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 3.2e-07 60.8 31 87.1
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 3.2e-07 60.8 44 63.6
MD06G1152300 Malus domestica HOM05D006543 ORTHO05D008308 7.1e-07 59.7 54 50.0


User provided reference genes

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