Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033311.2 Cucumis melo HOM05D005583 ORTHO05D044829 3.1e-36 154.5 69 100.0
MELO3C029988.2 Cucumis melo HOM05D007013 ORTHO05D029173 1.9e-09 65.5 30 86.7
MELO3C009939.2 Cucumis melo HOM05D005583 ORTHO05D006507 1.2e-08 62.8 28 89.3
MELO3C028469.2 Cucumis melo HOM05D005583 ORTHO05D044829 1.6e-08 62.4 28 89.3
ClCG10G014410 Citrullus lanatus HOM05D005583 ORTHO05D006507 2.7e-08 61.6 28 85.7
CsaV3_3G042180 Cucumis sativus L. HOM05D005583 ORTHO05D006507 4.6e-08 60.8 28 85.7
Nn4g22860 Nelumbo nucifera HOM05D005583 ORTHO05D006507 1.8e-07 58.9 28 82.1
Sed0016811 Sechium edule HOM05D005583 ORTHO05D006507 3.0e-07 58.2 28 82.1
MBI15_g24176_MAGBIO Magnolia biondii HOM05D005583 ORTHO05D006507 6.7e-07 57.0 28 75.0
Actinidia36072 Actinidia chinensis HOM05D005583 ORTHO05D006507 8.7e-07 56.6 28 78.6
arahy.Tifrunner.gnm1.ann1.8IP107 Arachis hypogaea HOM05D005583 ORTHO05D006507 8.7e-07 56.6 28 78.6
arahy.Tifrunner.gnm1.ann1.YT8U7M Arachis hypogaea HOM05D005583 ORTHO05D006507 8.7e-07 56.6 28 78.6
EL10Ac1g00599 Beta vulgaris HOM05D005583 ORTHO05D006507 8.7e-07 56.6 28 78.6
CiPaw.04G023600 Carya illinoinensis HOM05D005583 ORTHO05D006507 8.7e-07 56.6 28 78.6
Lj1g0019005 Lotus japonicus HOM05D005583 ORTHO05D006507 8.7e-07 56.6 28 78.6
Rhsim10G0025300 Rhododendron simsii HOM05D005583 ORTHO05D006507 8.7e-07 56.6 28 78.6
MSTRG.3182 Avicennia marina HOM05D005583 ORTHO05D006507 1.1e-06 56.2 28 78.6
Dinv35039 Davidia involucrata HOM05D005583 ORTHO05D006507 1.1e-06 56.2 28 78.6
Hma1.2p1_0697F.1_g204850 Hydrangea macrophylla HOM05D005583 ORTHO05D006507 1.1e-06 56.2 28 78.6
Hma1.2p1_0697F.1_g204860 Hydrangea macrophylla HOM05D005583 ORTHO05D006507 1.1e-06 56.2 28 78.6
Lalb_Chr10g0093441 Lupinus albus HOM05D005583 ORTHO05D006507 1.1e-06 56.2 28 78.6
RcHm_v2.0_Chr2g0170851 Rosa chinensis HOM05D005583 ORTHO05D006507 1.5e-06 55.8 28 75.0
Sc06g0001630 Simmondsia chinensis HOM05D005583 ORTHO05D006507 1.5e-06 55.8 28 75.0
Aqoxy3G03052 Aquilegia oxysepala HOM05D005583 ORTHO05D006507 1.9e-06 55.5 28 71.4
Hund12473 Selenicereus undatus HOM05D005583 ORTHO05D006507 1.9e-06 55.5 28 75.0
Migut.H00145 Erythranthe guttata HOM05D005583 ORTHO05D006507 2.5e-06 55.1 28 78.6
Medtr7g034405 Medicago truncatula HOM05D005583 ORTHO05D006507 2.5e-06 55.1 28 71.4
PGR142G3038 Punica granatum HOM05D005583 ORTHO05D006507 2.5e-06 55.1 28 75.0
Lj7A589G58 Lonicera japonica HOM05D005583 ORTHO05D006507 3.3e-06 54.7 28 75.0
Nitab4.5_0001727g0030 Nicotiana tabacum HOM05D005583 ORTHO05D006507 3.3e-06 54.7 28 71.4
Peaxi162Scf00368g00115 Petunia axillaris HOM05D005583 ORTHO05D006507 3.3e-06 54.7 28 71.4
Solyc02g067670.4 Solanum lycopersicum HOM05D005583 ORTHO05D006507 3.3e-06 54.7 28 71.4
Sopen02g016780 Solanum pennellii HOM05D005583 ORTHO05D006507 3.3e-06 54.7 28 71.4
PGSC0003DMG400006911 Solanum tuberosum HOM05D005583 ORTHO05D006507 3.3e-06 54.7 28 71.4
AUR62035940 Chenopodium quinoa HOM05D005583 ORTHO05D006507 4.3e-06 54.3 28 75.0
PSO063G3250 Papaver somniferum HOM05D005583 ORTHO05D006507 4.3e-06 54.3 28 71.4
PSO832G0708 Papaver somniferum HOM05D005583 ORTHO05D006507 4.3e-06 54.3 28 71.4
Potri.017G070500 Populus trichocarpa HOM05D005583 ORTHO05D006507 4.3e-06 54.3 28 75.0
QL02p077165 Quercus lobata HOM05D005583 ORTHO05D006507 4.3e-06 54.3 28 71.4
TWI56G1339 Tripterygium wilfordii HOM05D005583 ORTHO05D006507 4.3e-06 54.3 28 71.4
Cfa007452 Carpinus fangiana HOM05D005583 ORTHO05D006507 5.6e-06 53.9 28 71.4
Haze_14649 Corylus avellana HOM05D005583 ORTHO05D006507 5.6e-06 53.9 28 71.4
Glyma.01G077200 Glycine max HOM05D005583 ORTHO05D006507 5.6e-06 53.9 28 75.0
Cc07_g02460 Coffea canephora HOM05D005583 ORTHO05D006507 7.4e-06 53.5 28 75.0
Manes.15G181100 Manihot esculenta HOM05D005583 ORTHO05D006507 7.4e-06 53.5 28 75.0
Os03g0205400 Oryza sativa ssp. japonica HOM05D005583 ORTHO05D006507 7.4e-06 53.5 28 67.9
Zm00001eb007570 Zea mays HOM05D005583 ORTHO05D006507 7.4e-06 53.5 28 71.4
Ca_14482_v3 Cicer arietinum L. HOM05D005583 ORTHO05D006507 9.6e-06 53.1 28 71.4
Eucgr.I01829 Eucalyptus grandis HOM05D005583 ORTHO05D006507 9.6e-06 53.1 28 71.4
Psat3g171760 Pisum sativum HOM05D005583 ORTHO05D006507 9.6e-06 53.1 27 70.4
VMungo1383G3393 Vigna mungo HOM05D005583 ORTHO05D006507 9.6e-06 53.1 28 75.0
GSVIVG01032508001 Vitis vinifera HOM05D005583 ORTHO05D006507 9.6e-06 53.1 28 78.6


User provided reference genes

Program Settings