Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C019532.2 Cucumis melo HOM05D001184 ORTHO05D003397 1.9e-83 312.4 146 100.0
MELO3C020358.2 Cucumis melo HOM05D001184 ORTHO05D003397 3.2e-27 125.6 140 51.4
CsaV3_2G011140 Cucumis sativus L. HOM05D001184 ORTHO05D003397 5.5e-27 124.8 140 51.4
ClCG06G008040 Citrullus lanatus HOM05D001184 ORTHO05D003397 1.8e-25 119.8 140 49.3
Sed0027305 Sechium edule HOM05D001184 ORTHO05D003397 8.8e-25 117.5 140 47.9
Sed0003636 Sechium edule HOM05D001184 ORTHO05D003397 2.6e-24 115.9 144 50.0
VMungo1127G0354 Vigna mungo HOM05D001184 ORTHO05D003397 3.2e-19 99.0 142 41.5
GSVIVG01038361001 Vitis vinifera HOM05D001184 ORTHO05D003397 5.5e-19 98.2 150 41.3
FvH4_4g13560 Fragaria vesca HOM05D001184 ORTHO05D003397 1.6e-18 96.7 136 41.2
FAN12G0346 Fragaria x ananassa HOM05D001184 ORTHO05D003397 1.6e-18 96.7 136 41.2
Prupe.2G130000 Prunus persica HOM05D001184 ORTHO05D003397 1.6e-18 96.7 142 40.8
Phvul.011G020800 Phaseolus vulgaris HOM05D001184 ORTHO05D003397 2.1e-18 96.3 142 40.1
CDE08G1095 Ceratophyllum demersum HOM05D001184 ORTHO05D003397 2.7e-18 95.9 142 41.5
Prupe.2G130800 Prunus persica HOM05D001184 ORTHO05D003397 2.7e-18 95.9 142 41.5
MBI06_g27434_MAGBIO Magnolia biondii HOM05D001184 ORTHO05D003397 3.6e-18 95.5 141 41.1
FAN17G0017 Fragaria x ananassa HOM05D001184 ORTHO05D003397 6.1e-18 94.7 136 40.4
FAN22G0763 Fragaria x ananassa HOM05D001184 ORTHO05D003397 6.1e-18 94.7 136 40.4
Potri.017G057700 Populus trichocarpa HOM05D001184 ORTHO05D003397 1.4e-17 93.6 148 43.2
Actinidia29359 Actinidia chinensis HOM05D001184 ORTHO05D003397 1.8e-17 93.2 149 40.9
Prupe.1G159500 Prunus persica HOM05D001184 ORTHO05D003397 1.8e-17 93.2 142 41.5
Glyma.12G018400 Glycine max HOM05D001184 ORTHO05D003397 2.3e-17 92.8 142 37.3
MD04G1013400 Malus domestica HOM05D001184 ORTHO05D003397 3.9e-17 92.0 136 39.0
Oeu055765.1 Olea europaea HOM05D001184 ORTHO05D003397 3.9e-17 92.0 145 39.3
CDE06G0050 Ceratophyllum demersum HOM05D001184 ORTHO05D003397 5.2e-17 91.7 143 39.2
TAR633G0494 Trochodendron aralioides HOM05D001184 ORTHO05D003397 5.2e-17 91.7 142 40.1
CSS0018170 Camellia sinensis var. sinensis HOM05D001184 ORTHO05D003397 6.7e-17 91.3 147 39.5
CSS0036533 Camellia sinensis var. sinensis HOM05D001184 ORTHO05D003397 6.7e-17 91.3 147 39.5
HPP92_020335 Vanilla planifolia HOM05D001184 ORTHO05D003397 6.7e-17 91.3 142 38.0
Atru.chr13.1877 Acer truncatum HOM05D001184 ORTHO05D003397 8.8e-17 90.9 149 38.3
Potri.001G317500 Populus trichocarpa HOM05D001184 ORTHO05D003397 1.5e-16 90.1 146 40.4
Sabra17G0050800 Salix brachista HOM05D001184 ORTHO05D003397 1.5e-16 90.1 142 40.1
TAR362G0810 Trochodendron aralioides HOM05D001184 ORTHO05D003397 2.0e-16 89.7 150 39.3
Atru.chr4.1616 Acer truncatum HOM05D001184 ORTHO05D003397 2.6e-16 89.4 142 38.7
DCAR_023870 Daucus carota HOM05D001184 ORTHO05D003397 2.6e-16 89.4 142 40.1
DCAR_026633 Daucus carota HOM05D001184 ORTHO05D003397 3.3e-16 89.0 142 40.1
RcHm_v2.0_Chr4g0414311 Rosa chinensis HOM05D001184 ORTHO05D003397 3.3e-16 89.0 140 40.0
Ciclev10004343m.g Citrus clementina HOM05D001184 ORTHO05D003397 4.4e-16 88.6 144 38.2
CANSAT78G2277 Cannabis sativa HOM05D001184 ORTHO05D003397 7.4e-16 87.8 138 41.3
FAN07G0119 Fragaria x ananassa HOM05D001184 ORTHO05D003397 9.7e-16 87.4 140 40.0
MBI03_g42549_MAGBIO Magnolia biondii HOM05D001184 ORTHO05D003397 9.7e-16 87.4 143 39.2
Nitab4.5_0002889g0080 Nicotiana tabacum HOM05D001184 ORTHO05D003397 1.3e-15 87.0 149 37.6
Peaxi162Scf00423g00134 Petunia axillaris HOM05D001184 ORTHO05D003397 1.3e-15 87.0 147 37.4
arahy.Tifrunner.gnm1.ann1.28RW3P Arachis hypogaea HOM05D001184 ORTHO05D003397 1.7e-15 86.7 142 38.0
arahy.Tifrunner.gnm1.ann1.P6K76F Arachis hypogaea HOM05D001184 ORTHO05D003397 1.7e-15 86.7 142 38.0
Lj3g0023242 Lotus japonicus HOM05D001184 ORTHO05D003397 1.7e-15 86.7 145 36.6
Medtr4g122580 Medicago truncatula HOM05D001184 ORTHO05D003397 1.7e-15 86.7 143 35.0
Lalb_Chr01g0000971 Lupinus albus HOM05D001184 ORTHO05D003397 2.2e-15 86.3 141 39.0
Eucgr.H00043 Eucalyptus grandis HOM05D001184 ORTHO05D003397 2.8e-15 85.9 145 36.6
Sabra16G0200900 Salix brachista HOM05D001184 ORTHO05D003397 2.8e-15 85.9 161 37.9
Nitab4.5_0009377g0030 Nicotiana tabacum HOM05D001184 ORTHO05D003397 3.7e-15 85.5 149 36.9
Rhsim02G0172200 Rhododendron simsii HOM05D001184 ORTHO05D003397 3.7e-15 85.5 158 37.3
MBI14_g29293_MAGBIO Magnolia biondii HOM05D001184 ORTHO05D003397 4.8e-15 85.1 145 35.9
SalBow8G1842 Salvia bowleyana HOM05D001184 ORTHO05D003397 6.3e-15 84.7 146 37.0
SalBow8G3376 Salvia bowleyana HOM05D001184 ORTHO05D003397 6.3e-15 84.7 146 37.0
Medtr4g077700 Medicago truncatula HOM05D001184 ORTHO05D003397 1.8e-14 83.2 145 37.2
Ca_04924_v3 Cicer arietinum L. HOM05D001184 ORTHO05D003397 2.4e-14 82.8 146 36.3
Nitab4.5_0002365g0060 Nicotiana tabacum HOM05D001184 ORTHO05D003397 2.4e-14 82.8 151 35.8
SEGI_18693 Sequoiadendron giganteum HOM05D001184 ORTHO05D003397 2.4e-14 82.8 149 38.9
PGSC0003DMG400028753 Solanum tuberosum HOM05D001184 ORTHO05D003397 4.1e-14 82.0 144 34.7
CAN.G305.8 Capsicum annuum HOM05D001184 ORTHO05D003397 5.3e-14 81.6 147 38.1
Gohir.A09G206100 Gossypium hirsutum HOM05D001184 ORTHO05D003397 5.3e-14 81.6 144 36.1
Gorai.006G223400 Gossypium raimondii HOM05D001184 ORTHO05D003397 5.3e-14 81.6 144 36.1
Nitab4.5_0000366g0090 Nicotiana tabacum HOM05D001184 ORTHO05D003397 5.3e-14 81.6 151 35.1
PGSC0003DMG400019113 Solanum tuberosum HOM05D001184 ORTHO05D007940 5.3e-14 81.6 147 37.4
Migut.O00219 Erythranthe guttata HOM05D001184 ORTHO05D003397 7.0e-14 81.3 145 35.9
Sopen07g004890 Solanum pennellii HOM05D001184 ORTHO05D003397 7.0e-14 81.3 144 34.7
Gohir.D09G199700 Gossypium hirsutum HOM05D001184 ORTHO05D003397 9.1e-14 80.9 144 36.1
Psat4g022000 Pisum sativum HOM05D001184 ORTHO05D003397 9.1e-14 80.9 143 37.8
QL10p064653 Quercus lobata HOM05D001184 ORTHO05D003397 9.1e-14 80.9 143 41.3
QL10p065779 Quercus lobata HOM05D001184 ORTHO05D003397 9.1e-14 80.9 143 41.3
Haze_03548 Corylus avellana HOM05D001184 ORTHO05D003397 1.2e-13 80.5 143 39.9
Manes.15G055300 Manihot esculenta HOM05D001184 ORTHO05D003397 1.2e-13 80.5 145 39.3
TWI18G0923 Tripterygium wilfordii HOM05D001184 ORTHO05D003397 1.2e-13 80.5 147 35.4
CiPaw.02G065500 Carya illinoinensis HOM05D001184 ORTHO05D003397 2.0e-13 79.7 147 36.7
Peaxi162Scf00324g00227 Petunia axillaris HOM05D001184 ORTHO05D003397 2.0e-13 79.7 144 34.7
Psat7g171920 Pisum sativum HOM05D001184 ORTHO05D003397 2.6e-13 79.3 149 34.9
Hma1.2p1_0187F.1_g082410 Hydrangea macrophylla HOM05D001184 ORTHO05D003397 3.5e-13 79.0 143 37.8
Lalb_Chr19g0139901 Lupinus albus HOM05D001184 ORTHO05D003397 3.5e-13 79.0 141 36.9
Oeu049043.1 Olea europaea HOM05D001184 ORTHO05D003397 3.5e-13 79.0 190 33.2
Zm00001eb189910 Zea mays HOM05D001184 ORTHO05D003397 3.5e-13 79.0 142 35.2
Nn3g19994 Nelumbo nucifera HOM05D001184 ORTHO05D003397 4.5e-13 78.6 141 34.0
TWI12G1242 Tripterygium wilfordii HOM05D001184 ORTHO05D003397 4.5e-13 78.6 147 33.3
SHI11900 Sapria himalayana HOM05D001184 ORTHO05D003397 5.9e-13 78.2 152 37.5
Thecc.04G199200 Theobroma cacao HOM05D001184 ORTHO05D003397 5.9e-13 78.2 142 35.2
Ah.13g078060 Amaranthus hybridus HOM05D001184 ORTHO05D003397 7.7e-13 77.8 140 37.9
Duzib212G0797 Durio zibethinus HOM05D001184 ORTHO05D003397 1.0e-12 77.4 141 31.9
Nn1g07935 Nelumbo nucifera HOM05D001184 ORTHO05D003397 1.0e-12 77.4 147 35.4
PSO339G1617 Papaver somniferum HOM05D001184 ORTHO05D003397 1.0e-12 77.4 147 34.7
Zm00001eb400100 Zea mays HOM05D001184 ORTHO05D003397 2.2e-12 76.3 146 36.3
ATR0987G002 Amborella trichopoda HOM05D001184 ORTHO05D003397 2.9e-12 75.9 142 35.2
Duzib268G0787 Durio zibethinus HOM05D001184 ORTHO05D003397 2.9e-12 75.9 142 35.9
EL10Ac3g07475 Beta vulgaris HOM05D001184 ORTHO05D003397 3.8e-12 75.5 140 36.4
Cpa.g.sc83.20 Carica papaya HOM05D001184 ORTHO05D003397 5.0e-12 75.1 145 35.2
AUR62020841 Chenopodium quinoa HOM05D001184 ORTHO05D003397 5.0e-12 75.1 139 36.7
COL.COLO4_20192 Corchorus olitorius HOM05D001184 ORTHO05D003397 5.0e-12 75.1 148 33.1
PSO384G1210 Papaver somniferum HOM05D001184 ORTHO05D003397 5.0e-12 75.1 142 33.1
Zm00001eb008700 Zea mays HOM05D001184 ORTHO05D003397 5.0e-12 75.1 146 36.3
Lj7C738G14 Lonicera japonica HOM05D000109 ORTHO05D000210 6.5e-12 74.7 148 35.8
HanXRQChr15g0488241 Helianthus annuus HOM05D001184 ORTHO05D003397 8.5e-12 74.3 147 34.7
TPR.G34293 Trifolium pratense HOM05D001184 ORTHO05D003397 8.5e-12 74.3 148 32.4
AUR62018575 Chenopodium quinoa HOM05D001184 ORTHO05D003397 1.1e-11 73.9 144 36.8
MSTRG.4233 Avicennia marina HOM05D001184 ORTHO05D003397 3.2e-11 72.4 147 35.4
PGR142G4368 Punica granatum HOM05D001184 ORTHO05D003397 5.5e-11 71.6 160 32.5
SGA_v2.0_scaffold163G38069 Striga asiatica HOM05D001184 ORTHO05D003397 5.5e-11 71.6 148 35.1
THA.LOC104804806 Tarenaya hassleriana HOM05D001184 ORTHO05D003397 5.5e-11 71.6 142 35.2
BraA08t32681Z Brassica rapa HOM05D001184 ORTHO05D003397 7.2e-11 71.2 141 31.9
Lsat_1_v5_gn_2_46341 Lactuca sativa HOM05D001184 ORTHO05D003397 7.2e-11 71.2 154 33.1
Hund18999 Selenicereus undatus HOM05D001184 ORTHO05D003397 7.2e-11 71.2 142 36.6
Aqoxy5G03290 Aquilegia oxysepala HOM05D001184 ORTHO05D003397 1.2e-10 70.5 142 37.3
ECA247G2182 Erigeron canadensis HOM05D001184 ORTHO05D003397 1.2e-10 70.5 147 32.7
Mapoly0045s0011 Marchantia polymorpha HOM05D001184 ORTHO05D003397 1.2e-10 70.5 142 34.5
Aa31LG4G12540 Aethionema arabicum HOM05D001184 ORTHO05D003397 1.6e-10 70.1 144 35.4
A08p06650 Brassica napus HOM05D001184 ORTHO05D003397 1.6e-10 70.1 141 31.9
Glyma.13G000200 Glycine max HOM05D001184 ORTHO05D003397 1.6e-10 70.1 45 62.2
Sp7g11570 Schrenkiella parvula HOM05D001184 ORTHO05D003397 2.7e-10 69.3 142 33.1
C08p07710 Brassica napus HOM05D001184 ORTHO05D003397 4.7e-10 68.6 140 32.1
BolC8t47619H Brassica oleracea HOM05D001184 ORTHO05D003397 4.7e-10 68.6 140 32.1
Glyma.12G018300 Glycine max HOM05D001184 ORTHO05D003397 4.7e-10 68.6 45 57.8
RcHm_v2.0_Chr1g0332221 Rosa chinensis HOM05D001184 ORTHO05D003397 6.1e-10 68.2 45 60.0
HPP92_023535 Vanilla planifolia HOM05D001184 ORTHO05D003397 8.0e-10 67.8 141 31.2
SGA_v2.0_scaffold299G47730 Striga asiatica HOM05D001184 ORTHO05D003397 1.0e-09 67.4 144 35.4
BcaC07g37333 Brassica carinata HOM05D001184 ORTHO05D003397 1.8e-09 66.6 144 32.6
Psat4g136360 Pisum sativum HOM05D001184 ORTHO05D003397 1.8e-09 66.6 126 32.5
GSVIVG01020924001 Vitis vinifera HOM05D001184 ORTHO05D003397 2.3e-09 66.2 100 38.0
Carub.0007s2868 Capsella rubella HOM05D001184 ORTHO05D003397 3.0e-09 65.9 149 30.9
THA.LOC104808703 Tarenaya hassleriana HOM05D001184 ORTHO05D003397 3.0e-09 65.9 150 32.7
BcaB02g08652 Brassica carinata HOM05D001184 ORTHO05D003397 4.0e-09 65.5 142 33.1
CARHR054020 Cardamine hirsuta HOM05D001184 ORTHO05D003397 4.0e-09 65.5 132 32.6
Cc03_g08090 Coffea canephora HOM05D001184 ORTHO05D003397 4.0e-09 65.5 45 64.4
Thhalv10024450m.g Eutrema salsugineum HOM05D001184 ORTHO05D003397 4.0e-09 65.5 141 32.6
SalBow3G3036 Salvia bowleyana HOM05D001184 ORTHO05D003397 4.0e-09 65.5 83 41.0
Aa31LG9G3730 Aethionema arabicum HOM05D001184 ORTHO05D003397 5.2e-09 65.1 141 30.5
AL2G17960 Arabidopsis lyrata HOM05D001184 ORTHO05D003397 6.7e-09 64.7 126 36.5
unitig_32.g10864 Utricularia gibba HOM05D001184 ORTHO05D003397 6.7e-09 64.7 149 31.5
CARHR219660 Cardamine hirsuta HOM05D001184 ORTHO05D003397 8.8e-09 64.3 141 31.9
Dinv12661 Davidia involucrata HOM05D001184 ORTHO05D003397 1.5e-08 63.5 45 55.6
QL09p052106 Quercus lobata HOM05D001184 ORTHO05D003397 1.5e-08 63.5 45 62.2
QL09p052979 Quercus lobata HOM05D001184 ORTHO05D003397 1.5e-08 63.5 45 62.2
AT4G13780 Arabidopsis thaliana HOM05D001184 ORTHO05D003397 2.0e-08 63.2 148 29.7
vmacro11026 Vaccinium macrocarpon HOM05D001184 ORTHO05D003397 2.0e-08 63.2 45 57.8
Cfa002591 Carpinus fangiana HOM05D001184 ORTHO05D003397 5.7e-08 61.6 45 57.8
Haze_24834 Corylus avellana HOM05D001184 ORTHO05D003397 5.7e-08 61.6 45 57.8
Haze_24837 Corylus avellana HOM05D001184 ORTHO05D003397 5.7e-08 61.6 45 57.8
Lsat_1_v5_gn_6_60760 Lactuca sativa HOM05D001184 ORTHO05D003397 7.5e-08 61.2 45 55.6
Os10g0400100 Oryza sativa ssp. japonica HOM05D001184 ORTHO05D003397 7.5e-08 61.2 45 51.1
CiPaw.03G146700 Carya illinoinensis HOM05D001184 ORTHO05D003397 9.7e-08 60.8 45 53.3
Lj1A88G44 Lonicera japonica HOM05D001184 ORTHO05D003397 9.7e-08 60.8 45 57.8
Prupe.8G200100 Prunus persica HOM05D001184 ORTHO05D003397 9.7e-08 60.8 45 55.6
Pp3c13_2300 Physcomitrium patens HOM05D001184 ORTHO05D003397 2.2e-07 59.7 144 31.2
Actinidia31466 Actinidia chinensis HOM05D001184 ORTHO05D003397 2.8e-07 59.3 47 51.1
MD05G1172700 Malus domestica HOM05D001184 ORTHO05D003397 2.8e-07 59.3 45 57.8
Psat7g142400 Pisum sativum HOM05D001184 ORTHO05D003397 3.7e-07 58.9 45 51.1
BraA04t16533Z Brassica rapa HOM05D001184 ORTHO05D003397 6.3e-07 58.2 142 31.7
Ciclev10024095m.g Citrus clementina HOM05D001184 ORTHO05D003397 6.3e-07 58.2 45 51.1
HanXRQChr02g0059041 Helianthus annuus HOM05D001184 ORTHO05D003397 6.3e-07 58.2 45 53.3
Pp3c3_5590 Physcomitrium patens HOM05D001184 ORTHO05D003397 8.2e-07 57.8 150 31.3
Lsat_1_v5_gn_4_149740 Lactuca sativa HOM05D001184 ORTHO05D011740 1.4e-06 57.0 45 53.3
Psat7g142560 Pisum sativum HOM05D001184 ORTHO05D003397 1.4e-06 57.0 45 48.9
BcaC02g09391 Brassica carinata HOM05D001184 ORTHO05D003397 1.8e-06 56.6 142 30.3
A04p08440 Brassica napus HOM05D001184 ORTHO05D003397 1.8e-06 56.6 142 31.0
Dinv38206 Davidia involucrata HOM05D001184 ORTHO05D003397 2.4e-06 56.2 45 53.3
AagrBONN_evm.TU.Sc2ySwM_368.2348 Anthoceros agrestis HOM05D001184 ORTHO05D003397 3.1e-06 55.8 143 25.9
vmacro02776 Vaccinium macrocarpon HOM05D001184 ORTHO05D003397 3.1e-06 55.8 45 48.9
AL7G42740 Arabidopsis lyrata HOM05D001184 ORTHO05D003397 4.1e-06 55.5 141 29.8
Oeu043455.1 Olea europaea HOM05D001184 ORTHO05D003397 5.3e-06 55.1 45 53.3
QL02p084624 Quercus lobata HOM05D001184 ORTHO05D003397 5.3e-06 55.1 45 57.8
CSS0043546 Camellia sinensis var. sinensis HOM05D001184 ORTHO05D003397 7.0e-06 54.7 38 57.9


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