Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C014095.2 Cucumis melo HOM05D001013 ORTHO05D004597 2.1e-39 165.2 82 100.0
ClCG03G013290 Citrullus lanatus HOM05D001013 ORTHO05D004597 9.9e-26 119.8 61 93.4
MELO3C015199.2 Cucumis melo HOM05D001013 ORTHO05D004597 9.9e-26 119.8 61 93.4
CsaV3_1G042760 Cucumis sativus L. HOM05D001013 ORTHO05D004597 9.9e-26 119.8 61 93.4
Sed0014521 Sechium edule HOM05D001013 ORTHO05D004597 2.2e-25 118.6 61 91.8
Hma1.2p1_0861F.1_g229790 Hydrangea macrophylla HOM05D001013 ORTHO05D004597 2.4e-24 115.2 61 83.6
MELO3C016640.2 Cucumis melo HOM05D001013 ORTHO05D004597 3.2e-24 114.8 61 88.5
Cc07_g19600 Coffea canephora HOM05D001013 ORTHO05D004597 5.4e-24 114.0 61 85.2
Lj2A632G19 Lonicera japonica HOM05D001013 ORTHO05D004597 9.3e-24 113.2 69 76.8
Psat5g286360 Pisum sativum HOM05D001013 ORTHO05D004597 9.3e-24 113.2 61 86.9
arahy.Tifrunner.gnm1.ann1.EX6ZD6 Arachis hypogaea HOM05D001013 ORTHO05D004597 1.2e-23 112.8 61 86.9
arahy.Tifrunner.gnm1.ann1.I21QA9 Arachis hypogaea HOM05D001013 ORTHO05D004597 1.2e-23 112.8 61 86.9
Eucgr.J00780 Eucalyptus grandis HOM05D001013 ORTHO05D004597 1.2e-23 112.8 61 85.2
Medtr2g098030 Medicago truncatula HOM05D001013 ORTHO05D004597 1.2e-23 112.8 61 86.9
Dinv36267 Davidia involucrata HOM05D001013 ORTHO05D004597 1.6e-23 112.5 61 83.6
Sp7g32650 Schrenkiella parvula HOM05D001013 ORTHO05D004597 1.6e-23 112.5 61 86.9
TPR.G6821 Trifolium pratense HOM05D001013 ORTHO05D004597 1.6e-23 112.5 61 86.9
VMungo1080G0609 Vigna mungo HOM05D001013 ORTHO05D004597 1.6e-23 112.5 61 85.2
ATR0605G208 Amborella trichopoda HOM05D001013 ORTHO05D004597 2.1e-23 112.1 61 85.2
A01p03620 Brassica napus HOM05D001013 ORTHO05D004597 2.1e-23 112.1 61 86.9
BolC1t00384H Brassica oleracea HOM05D001013 ORTHO05D004597 2.1e-23 112.1 61 86.9
BraA01t00348Z Brassica rapa HOM05D001013 ORTHO05D004597 2.1e-23 112.1 61 86.9
CSS0021836 Camellia sinensis var. sinensis HOM05D001013 ORTHO05D004597 2.1e-23 112.1 61 85.2
Ciclev10014051m.g Citrus clementina HOM05D001013 ORTHO05D004597 2.1e-23 112.1 61 85.2
THA.LOC104817905 Tarenaya hassleriana HOM05D001013 ORTHO05D004597 2.1e-23 112.1 61 83.6
Aa31LG2G15640 Aethionema arabicum HOM05D001013 ORTHO05D004597 2.7e-23 111.7 61 86.9
EL10Ac4g10268 Beta vulgaris HOM05D001013 ORTHO05D004597 2.7e-23 111.7 61 85.2
EL10Ac4g10284 Beta vulgaris HOM05D001013 ORTHO05D004597 2.7e-23 111.7 61 85.2
C01p03910 Brassica napus HOM05D001013 ORTHO05D004597 2.7e-23 111.7 61 86.9
CARHR243170 Cardamine hirsuta HOM05D001013 ORTHO05D004597 2.7e-23 111.7 61 85.2
DCAR_002067 Daucus carota HOM05D001013 ORTHO05D004597 2.7e-23 111.7 61 83.6
Migut.D00593 Erythranthe guttata HOM05D001013 ORTHO05D004597 2.7e-23 111.7 61 83.6
Eucgr.J00782 Eucalyptus grandis HOM05D001013 ORTHO05D004597 2.7e-23 111.7 69 76.8
Thhalv10024224m.g Eutrema salsugineum HOM05D001013 ORTHO05D004597 2.7e-23 111.7 61 85.2
Hund22038 Selenicereus undatus HOM05D001013 ORTHO05D004597 3.5e-23 111.3 61 85.2
Carub.0007s0540 Capsella rubella HOM05D001013 ORTHO05D004597 4.6e-23 110.9 61 85.2
Ca_01292_v3 Cicer arietinum L. HOM05D001013 ORTHO05D004597 4.6e-23 110.9 61 85.2
Gohir.A09G114800 Gossypium hirsutum HOM05D001013 ORTHO05D004597 4.6e-23 110.9 61 85.2
Gohir.D09G111500 Gossypium hirsutum HOM05D001013 ORTHO05D004597 4.6e-23 110.9 61 85.2
Rhsim13G0222300 Rhododendron simsii HOM05D001013 ORTHO05D004597 4.6e-23 110.9 61 83.6
TAR636G2042 Trochodendron aralioides HOM05D001013 ORTHO05D004597 4.6e-23 110.9 61 82.0
vmacro04203 Vaccinium macrocarpon HOM05D001013 ORTHO05D004597 4.6e-23 110.9 69 73.9
AL7G16310 Arabidopsis lyrata HOM05D001013 ORTHO05D004597 6.0e-23 110.5 61 83.6
AT4G34890 Arabidopsis thaliana HOM05D001013 ORTHO05D004597 6.0e-23 110.5 61 83.6
Lsat_1_v5_gn_2_97481 Lactuca sativa HOM05D001013 ORTHO05D004597 6.0e-23 110.5 69 73.9
Phvul.L009543 Phaseolus vulgaris HOM05D001013 ORTHO05D004597 6.0e-23 110.5 61 83.6
Prupe.4G245700 Prunus persica HOM05D001013 ORTHO05D004597 7.9e-23 110.2 61 83.6
unitig_90.g27489 Utricularia gibba HOM05D001013 ORTHO05D004597 7.9e-23 110.2 61 82.0
Glyma.13G340300 Glycine max HOM05D001013 ORTHO05D004597 1.0e-22 109.8 69 73.9
Glyma.15G034000 Glycine max HOM05D001013 ORTHO05D004597 1.0e-22 109.8 69 73.9
Gorai.006G129200 Gossypium raimondii HOM05D001013 ORTHO05D004597 1.0e-22 109.8 61 83.6
Sabra09G0039900 Salix brachista HOM05D001013 ORTHO05D004597 1.0e-22 109.8 61 82.0
Actinidia16323 Actinidia chinensis HOM05D001013 ORTHO05D004597 1.3e-22 109.4 61 83.6
Cpa.g.sc84.69 Carica papaya HOM05D001013 ORTHO05D004597 1.3e-22 109.4 61 80.3
Haze_23121 Corylus avellana HOM05D001013 ORTHO05D004597 1.3e-22 109.4 69 73.9
Lalb_Chr24g0397071 Lupinus albus HOM05D001013 ORTHO05D004597 1.3e-22 109.4 61 83.6
MD11G1161000 Malus domestica HOM05D001013 ORTHO05D004597 1.3e-22 109.4 69 73.9
MD11G1197900 Malus domestica HOM05D001013 ORTHO05D004597 1.3e-22 109.4 69 73.9
Nn2g15465 Nelumbo nucifera HOM05D001013 ORTHO05D004597 1.3e-22 109.4 61 82.0
PGR119G0568 Punica granatum HOM05D001013 ORTHO05D004597 1.3e-22 109.4 61 82.0
AL6G50970 Arabidopsis lyrata HOM05D001013 ORTHO05D004597 1.8e-22 109.0 61 83.6
Duzib170G0402 Durio zibethinus HOM05D001013 ORTHO05D004597 1.8e-22 109.0 61 82.0
Manes.06G165500 Manihot esculenta HOM05D001013 ORTHO05D004597 1.8e-22 109.0 61 82.0
QL01p005011 Quercus lobata HOM05D001013 ORTHO05D004597 1.8e-22 109.0 61 80.3
Aqoxy1G00274 Aquilegia oxysepala HOM05D001013 ORTHO05D004597 2.3e-22 108.6 61 82.0
MSTRG.18423 Avicennia marina HOM05D001013 ORTHO05D004597 2.3e-22 108.6 61 82.0
CiPaw.14G119800 Carya illinoinensis HOM05D001013 ORTHO05D004597 2.3e-22 108.6 61 82.0
TWI34G0448 Tripterygium wilfordii HOM05D001013 ORTHO05D004597 2.3e-22 108.6 61 80.3
EL10Ac4g10130 Beta vulgaris HOM05D001013 ORTHO05D004597 3.0e-22 108.2 61 83.6
EL10Ac4g10159 Beta vulgaris HOM05D001013 ORTHO05D004597 3.0e-22 108.2 61 83.6
Potri.009G054600 Populus trichocarpa HOM05D001013 ORTHO05D004597 3.0e-22 108.2 61 78.7
SGA_v2.0_scaffold247G44871 Striga asiatica HOM05D001013 ORTHO05D004597 3.0e-22 108.2 69 68.1
Thecc.09G231300 Theobroma cacao HOM05D001013 ORTHO05D004597 3.0e-22 108.2 61 83.6
Zm00001eb021020 Zea mays HOM05D001013 ORTHO05D004597 3.0e-22 108.2 69 72.5
CANSAT01G2178 Cannabis sativa HOM05D001013 ORTHO05D004597 3.9e-22 107.8 69 72.5
Lj3g0023347 Lotus japonicus HOM05D001013 ORTHO05D004597 3.9e-22 107.8 61 80.3
AT4G34900 Arabidopsis thaliana HOM05D001013 ORTHO05D004597 5.1e-22 107.5 61 82.0
Lsat_1_v5_gn_2_97521 Lactuca sativa HOM05D001013 ORTHO05D004597 5.1e-22 107.5 69 71.0
Sc06g0004540 Simmondsia chinensis HOM05D001013 ORTHO05D004597 5.1e-22 107.5 61 78.7
Ah.06g194350 Amaranthus hybridus HOM05D001013 ORTHO05D004597 6.7e-22 107.1 61 82.0
CARHR250380 Cardamine hirsuta HOM05D001013 ORTHO05D004597 6.7e-22 107.1 61 82.0
GSVIVG01025282001 Vitis vinifera HOM05D001013 ORTHO05D004597 6.7e-22 107.1 60 83.3
Os03g0429800 Oryza sativa ssp. japonica HOM05D001013 ORTHO05D004597 8.7e-22 106.7 69 68.1
Atru.chr3.2746 Acer truncatum HOM05D001013 ORTHO05D004597 1.1e-21 106.3 61 80.3
AUR62000107 Chenopodium quinoa HOM05D001013 ORTHO05D004597 1.5e-21 105.9 61 80.3
AUR62019282 Chenopodium quinoa HOM05D001013 ORTHO05D004597 1.5e-21 105.9 61 80.3
arahy.Tifrunner.gnm1.ann1.V5338L Arachis hypogaea HOM05D001013 ORTHO05D004597 1.9e-21 105.5 61 82.0
A09p01610 Brassica napus HOM05D001013 ORTHO05D004597 1.9e-21 105.5 61 78.7
CAN.G327.12 Capsicum annuum HOM05D001013 ORTHO05D004597 1.9e-21 105.5 61 80.3
FvH4_3g29000 Fragaria vesca HOM05D001013 ORTHO05D004597 1.9e-21 105.5 69 71.0
FAN11G2909 Fragaria x ananassa HOM05D001013 ORTHO05D004597 1.9e-21 105.5 69 71.0
FAN21G2353 Fragaria x ananassa HOM05D001013 ORTHO05D004597 1.9e-21 105.5 69 71.0
FAN25G0972 Fragaria x ananassa HOM05D001013 ORTHO05D004597 1.9e-21 105.5 69 71.0
A09p01640 Brassica napus HOM05D001013 ORTHO05D004597 2.5e-21 105.1 61 77.0
Cfa009756 Carpinus fangiana HOM05D001013 ORTHO05D004597 2.5e-21 105.1 61 82.0
PSO384G0041 Papaver somniferum HOM05D001013 ORTHO05D004597 2.5e-21 105.1 69 68.1
PSO384G2146 Papaver somniferum HOM05D001013 ORTHO05D004597 2.5e-21 105.1 69 68.1
SMO351G0580 Selaginella moellendorffii HOM05D001013 ORTHO05D004597 2.5e-21 105.1 69 72.5
Peaxi162Scf01427g00007 Petunia axillaris HOM05D001013 ORTHO05D004597 3.3e-21 104.8 69 73.9
BcaC04g24043 Brassica carinata HOM05D001013 ORTHO05D004597 4.3e-21 104.4 61 77.0
BraA09t35819Z Brassica rapa HOM05D001013 ORTHO05D004597 4.3e-21 104.4 61 77.0
RcHm_v2.0_Chr5g0051661 Rosa chinensis HOM05D001013 ORTHO05D004597 4.3e-21 104.4 69 71.0
Solyc11g065920.2 Solanum lycopersicum HOM05D001013 ORTHO05D004597 4.3e-21 104.4 61 77.0
Sopen11g025660 Solanum pennellii HOM05D001013 ORTHO05D004597 4.3e-21 104.4 61 77.0
BcaB01g02072 Brassica carinata HOM05D001013 ORTHO05D004597 5.6e-21 104.0 61 77.0
SEGI_30496 Sequoiadendron giganteum HOM05D001013 ORTHO05D004597 7.4e-21 103.6 61 80.3
C09p01710 Brassica napus HOM05D001013 ORTHO05D004597 9.6e-21 103.2 61 77.0
BolC9t53105H Brassica oleracea HOM05D001013 ORTHO05D004597 9.6e-21 103.2 61 77.0
Nitab4.5_0001800g0150 Nicotiana tabacum HOM05D001013 ORTHO05D004597 1.6e-20 102.4 61 77.0
ECA238G2169 Erigeron canadensis HOM05D001013 ORTHO05D004597 2.1e-20 102.1 69 68.1
SHI29744 Sapria himalayana HOM05D001013 ORTHO05D004597 2.1e-20 102.1 61 75.4
COL.COLO4_24880 Corchorus olitorius HOM05D001013 ORTHO05D004597 2.8e-20 101.7 61 75.4
ECA238G2654 Erigeron canadensis HOM05D001013 ORTHO05D004597 2.8e-20 101.7 69 69.6
TAR633G1179 Trochodendron aralioides HOM05D001013 ORTHO05D004597 3.7e-20 101.3 61 77.0
HPP92_023576 Vanilla planifolia HOM05D001013 ORTHO05D004597 3.7e-20 101.3 61 72.1
Nitab4.5_0006994g0020 Nicotiana tabacum HOM05D001013 ORTHO05D004597 4.8e-20 100.9 61 75.4
Mapoly0014s0136 Marchantia polymorpha HOM05D001013 ORTHO05D004597 4.0e-19 97.8 61 75.4
AagrBONN_evm.TU.Sc2ySwM_228.138 Anthoceros agrestis HOM05D001013 ORTHO05D004597 9.0e-19 96.7 60 71.7
CDE05G3370 Ceratophyllum demersum HOM05D001013 ORTHO05D004597 9.0e-19 96.7 69 63.8
Solyc11g065930.3 Solanum lycopersicum HOM05D001013 ORTHO05D004597 4.5e-18 94.4 69 59.4
Sopen11g025670 Solanum pennellii HOM05D001013 ORTHO05D004597 4.5e-18 94.4 69 59.4
Pp3c20_16340 Physcomitrium patens HOM05D001013 ORTHO05D004597 5.8e-18 94.0 61 68.9
BcaNung00646 Brassica carinata HOM05D001013 ORTHO05D004597 2.9e-17 91.7 51 86.3
MCO15G310 Micromonas commoda HOM05D001013 ORTHO05D004597 8.4e-17 90.1 61 63.9
CBR_g30957 Chara braunii HOM05D001013 ORTHO05D004597 1.4e-16 89.4 61 63.9
MD03G1177200 Malus domestica HOM05D001013 ORTHO05D004597 1.9e-13 79.0 62 62.9
Cfa025145 Carpinus fangiana HOM05D001013 ORTHO05D004597 1.6e-12 75.9 60 58.3
PRCOL_00001493 Prasinoderma coloniale HOM05D001013 ORTHO05D004597 6.2e-12 73.9 65 49.2
Cre12.g545101 Chlamydomonas reinhardtii HOM05D001013 ORTHO05D004597 4.0e-11 71.2 61 50.8
EL10Ac4g10161 Beta vulgaris HOM05D001013 ORTHO05D004597 6.9e-11 70.5 36 83.3
MELO3C034647.2 Cucumis melo HOM05D001013 ORTHO05D004597 7.6e-10 67.0 35 91.4


User provided reference genes

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