Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1111600 Malus domestica HOM05D005196 ORTHO05D006107 1.4e-156 556.2 279 100.0
MD06G1090700 Malus domestica HOM05D005196 ORTHO05D006107 8.1e-120 434.1 241 92.1
Prupe.5G106300 Prunus persica HOM05D005196 ORTHO05D006107 1.1e-113 413.7 242 88.8
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 2.9e-101 372.5 250 79.6
FAN13G1103 Fragaria x ananassa HOM05D005196 ORTHO05D006107 2.1e-99 366.3 240 82.5
RcHm_v2.0_Chr7g0196611 Rosa chinensis HOM05D005196 ORTHO05D006107 2.1e-99 366.3 240 82.5
FAN04G1400 Fragaria x ananassa HOM05D005196 ORTHO05D006107 2.7e-99 365.9 240 82.5
FvH4_5g03170 Fragaria vesca HOM05D005196 ORTHO05D006107 3.5e-99 365.5 240 82.1
FAN18G0698 Fragaria x ananassa HOM05D005196 ORTHO05D006107 1.4e-95 353.6 185 93.5
QL12p031809 Quercus lobata HOM05D005196 ORTHO05D006107 1.9e-92 343.2 205 82.4
Haze_08760 Corylus avellana HOM05D005196 ORTHO05D006107 2.5e-92 342.8 241 74.7
MSTRG.11956 Avicennia marina HOM05D005196 ORTHO05D006107 1.6e-91 340.1 200 83.0
CANSAT21G0568 Cannabis sativa HOM05D005196 ORTHO05D006107 4.6e-91 338.6 246 73.6
AL2G11140 Arabidopsis lyrata HOM05D005196 ORTHO05D006107 1.8e-90 336.7 210 79.5
Hma1.2p1_0377F.1_g139550 Hydrangea macrophylla HOM05D005196 ORTHO05D006107 3.0e-90 335.9 200 84.5
PGR031G3114 Punica granatum HOM05D005196 ORTHO05D006107 6.7e-90 334.7 198 84.3
CiPaw.11G130000 Carya illinoinensis HOM05D005196 ORTHO05D006107 8.7e-90 334.3 247 71.7
HanXRQChr03g0085971 Helianthus annuus HOM05D005196 ORTHO05D006107 8.7e-90 334.3 233 73.0
Glyma.11G021400 Glycine max HOM05D005196 ORTHO05D006107 1.5e-89 333.6 234 74.8
LjContig00312_ERROPOS870357g0014232 Lotus japonicus HOM05D005196 ORTHO05D006107 1.9e-89 333.2 246 69.9
Nn1g01669 Nelumbo nucifera HOM05D005196 ORTHO05D006107 1.9e-89 333.2 243 72.8
GSVIVG01019415001 Vitis vinifera HOM05D005196 ORTHO05D006107 3.3e-89 332.4 181 89.0
CAN.G532.37 Capsicum annuum HOM05D005196 ORTHO05D006107 4.3e-89 332.0 241 71.8
Gohir.D03G078300 Gossypium hirsutum HOM05D005196 ORTHO05D006107 5.7e-89 331.6 236 74.2
Gorai.003G085800 Gossypium raimondii HOM05D005196 ORTHO05D006107 5.7e-89 331.6 236 74.2
Phvul.002G159900 Phaseolus vulgaris HOM05D005196 ORTHO05D006107 5.7e-89 331.6 245 71.8
SGA_v2.0_scaffold111G31472 Striga asiatica HOM05D005196 ORTHO05D006107 5.7e-89 331.6 191 82.2
Migut.A00721 Erythranthe guttata HOM05D005196 ORTHO05D006107 9.6e-89 330.9 238 73.1
Lsat_1_v5_gn_6_84980 Lactuca sativa HOM05D005196 ORTHO05D006107 1.3e-88 330.5 237 73.4
Potri.003G132400 Populus trichocarpa HOM05D005196 ORTHO05D006107 1.3e-88 330.5 181 87.3
AT1G63970 Arabidopsis thaliana HOM05D005196 ORTHO05D006107 1.6e-88 330.1 210 79.0
CARHR047010 Cardamine hirsuta HOM05D005196 ORTHO05D006107 1.6e-88 330.1 210 77.6
Potri.001G099300 Populus trichocarpa HOM05D005196 ORTHO05D006107 1.6e-88 330.1 207 80.7
Duzib205G0943 Durio zibethinus HOM05D005196 ORTHO05D006107 2.1e-88 329.7 229 74.7
Eucgr.E00780 Eucalyptus grandis HOM05D005196 ORTHO05D006107 2.1e-88 329.7 232 74.1
Aa31LG2G1060 Aethionema arabicum HOM05D005196 ORTHO05D006107 2.8e-88 329.3 234 74.8
Cc08_g15230 Coffea canephora HOM05D005196 ORTHO05D006107 2.8e-88 329.3 185 85.9
MELO3C016339.2 Cucumis melo HOM05D005196 ORTHO05D006107 2.8e-88 329.3 222 77.0
Thecc.03G286300 Theobroma cacao HOM05D005196 ORTHO05D006107 2.8e-88 329.3 181 88.4
Cfa012239 Carpinus fangiana HOM05D005196 ORTHO05D006107 3.7e-88 328.9 260 66.9
Gohir.A02G105500 Gossypium hirsutum HOM05D005196 ORTHO05D006107 3.7e-88 328.9 229 74.2
BcaB07g31421 Brassica carinata HOM05D005196 ORTHO05D006107 6.3e-88 328.2 239 72.4
CSS0021900 Camellia sinensis var. sinensis HOM05D005196 ORTHO05D006107 6.3e-88 328.2 241 71.8
Medtr5g010010 Medicago truncatula HOM05D005196 ORTHO05D006107 6.3e-88 328.2 232 70.7
Nitab4.5_0007906g0030 Nicotiana tabacum HOM05D005196 ORTHO05D006107 6.3e-88 328.2 244 70.1
TAR636G2140 Trochodendron aralioides HOM05D005196 ORTHO05D006107 6.3e-88 328.2 181 87.3
Cpa.g.sc631.3 Carica papaya HOM05D005196 ORTHO05D006107 8.2e-88 327.8 243 70.0
Aqoxy7G00203 Aquilegia oxysepala HOM05D005196 ORTHO05D006107 1.1e-87 327.4 181 86.7
Duzib068G0196 Durio zibethinus HOM05D005196 ORTHO05D006107 1.1e-87 327.4 181 88.4
Peaxi162Scf00074g01724 Petunia axillaris HOM05D005196 ORTHO05D006107 1.1e-87 327.4 181 86.2
BcaB07g31533 Brassica carinata HOM05D005196 ORTHO05D006107 1.4e-87 327.0 238 72.7
COL.COLO4_08364 Corchorus olitorius HOM05D005196 ORTHO05D006107 1.8e-87 326.6 181 87.3
Sed0013368 Sechium edule HOM05D005196 ORTHO05D006107 1.8e-87 326.6 240 74.6
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 3.1e-87 325.9 240 70.4
arahy.Tifrunner.gnm1.ann1.RG9U10 Arachis hypogaea HOM05D005196 ORTHO05D006107 4.1e-87 325.5 212 76.9
Sopen08g029880 Solanum pennellii HOM05D005196 ORTHO05D006107 4.1e-87 325.5 235 72.3
A09p14050 Brassica napus HOM05D005196 ORTHO05D006107 5.3e-87 325.1 235 73.6
Solyc08g081570.3 Solanum lycopersicum HOM05D005196 ORTHO05D006107 6.9e-87 324.7 235 73.2
Carub.0002s0087 Capsella rubella HOM05D005196 ORTHO05D006107 9.0e-87 324.3 232 75.0
Sp2g00720 Schrenkiella parvula HOM05D005196 ORTHO05D006107 9.0e-87 324.3 235 71.5
ClCG07G007880 Citrullus lanatus HOM05D005196 ORTHO05D006107 1.2e-86 323.9 225 75.1
Ca_24538_v3 Cicer arietinum L. HOM05D005196 ORTHO05D006107 1.5e-86 323.6 189 82.0
THA.LOC104823600 Tarenaya hassleriana HOM05D005196 ORTHO05D006107 1.5e-86 323.6 232 74.1
CiPaw.12G089400 Carya illinoinensis HOM05D005196 ORTHO05D006107 2.0e-86 323.2 240 70.4
Manes.02G017610 Manihot esculenta HOM05D005196 ORTHO05D006107 2.0e-86 323.2 230 72.6
PGSC0003DMG400012185 Solanum tuberosum HOM05D005196 ORTHO05D006107 2.0e-86 323.2 219 74.0
PSO478G4030 Papaver somniferum HOM05D005196 ORTHO05D006107 3.4e-86 322.4 178 87.6
Hund11434 Selenicereus undatus HOM05D005196 ORTHO05D006107 3.4e-86 322.4 191 82.7
A09p15170 Brassica napus HOM05D005196 ORTHO05D006107 4.5e-86 322.0 240 71.2
Lj2A178G47 Lonicera japonica HOM05D005196 ORTHO05D006107 4.5e-86 322.0 235 71.9
Nitab4.5_0003015g0100 Nicotiana tabacum HOM05D005196 ORTHO05D006107 4.5e-86 322.0 240 71.2
PSO782G4831 Papaver somniferum HOM05D005196 ORTHO05D006107 4.5e-86 322.0 245 71.0
DCAR_005572 Daucus carota HOM05D005196 ORTHO05D006107 7.6e-86 321.2 181 85.1
Actinidia10607 Actinidia chinensis HOM05D005196 ORTHO05D006107 1.0e-85 320.9 189 82.5
Ciclev10021991m.g Citrus clementina HOM05D005196 ORTHO05D006107 1.3e-85 320.5 233 70.8
Gorai.004G137800 Gossypium raimondii HOM05D005196 ORTHO05D006107 1.3e-85 320.5 181 85.6
Sabra01G0074500 Salix brachista HOM05D005196 ORTHO05D006107 1.3e-85 320.5 180 85.6
TWI81G1086 Tripterygium wilfordii HOM05D005196 ORTHO05D006107 1.3e-85 320.5 196 81.6
CsaV3_4G006100 Cucumis sativus L. HOM05D005196 ORTHO05D006107 1.7e-85 320.1 245 71.8
C09p18370 Brassica napus HOM05D005196 ORTHO05D006107 2.2e-85 319.7 248 70.2
BolC9t54730H Brassica oleracea HOM05D005196 ORTHO05D006107 2.2e-85 319.7 248 70.2
BraA09t37159Z Brassica rapa HOM05D005196 ORTHO05D006107 2.2e-85 319.7 240 71.2
C09p16940 Brassica napus HOM05D005196 ORTHO05D006107 2.9e-85 319.3 235 72.8
BcaC04g22518 Brassica carinata HOM05D005196 ORTHO05D006107 3.8e-85 318.9 247 70.0
MSTRG.13860 Avicennia marina HOM05D005196 ORTHO05D006107 5.0e-85 318.5 244 69.3
Sabra03G0094900 Salix brachista HOM05D005196 ORTHO05D006107 5.0e-85 318.5 247 70.9
SGA_v2.0_scaffold144G35903 Striga asiatica HOM05D005196 ORTHO05D006107 1.1e-84 317.4 192 80.7
BcaC04g22662 Brassica carinata HOM05D005196 ORTHO05D006107 1.9e-84 316.6 235 72.8
BraA09t37052Z Brassica rapa HOM05D005196 ORTHO05D006107 1.9e-84 316.6 242 71.9
THA.LOC104809368 Tarenaya hassleriana HOM05D005196 ORTHO05D006107 2.5e-84 316.2 211 75.8
BolC9t54591H Brassica oleracea HOM05D005196 ORTHO05D006107 3.2e-84 315.8 229 72.5
AUR62010748 Chenopodium quinoa HOM05D005196 ORTHO05D006107 3.2e-84 315.8 207 76.3
unitig_37.g12237 Utricularia gibba HOM05D005196 ORTHO05D006107 5.5e-84 315.1 192 80.7
Gohir.D08G134600 Gossypium hirsutum HOM05D005196 ORTHO05D006107 1.6e-83 313.5 188 82.4
Rhsim02G0235500 Rhododendron simsii HOM05D005196 ORTHO05D006107 2.7e-83 312.8 232 72.0
Ah.12g051910 Amaranthus hybridus HOM05D005196 ORTHO05D006107 4.6e-83 312.0 188 78.7
Lalb_Chr09g0320831 Lupinus albus HOM05D005196 ORTHO05D006107 4.6e-83 312.0 177 84.7
ATR0661G112 Amborella trichopoda HOM05D005196 ORTHO05D006107 6.1e-83 311.6 178 84.8
SMO118G0129 Selaginella moellendorffii HOM05D005196 ORTHO05D006107 7.9e-83 311.2 196 76.5
Oeu042360.2 Olea europaea HOM05D005196 ORTHO05D006107 1.8e-82 310.1 255 65.9
HPP92_025411 Vanilla planifolia HOM05D005196 ORTHO05D006107 3.9e-82 308.9 187 78.6
Os02g0680600 Oryza sativa ssp. japonica HOM05D005196 ORTHO05D006107 6.7e-82 308.1 245 68.2
ECA240G2051 Erigeron canadensis HOM05D000662 ORTHO05D000597 8.7e-82 307.8 221 70.6
Pp3c3_18960 Physcomitrium patens HOM05D005196 ORTHO05D006107 1.1e-81 307.4 184 80.4
Sc01g0009830 Simmondsia chinensis HOM05D005196 ORTHO05D006107 1.1e-81 307.4 226 69.0
Mapoly0107s0035 Marchantia polymorpha HOM05D005196 ORTHO05D006107 2.8e-80 302.8 185 80.5
SEGI_33828 Sequoiadendron giganteum HOM05D005196 ORTHO05D006107 1.4e-79 300.4 168 83.3
arahy.Tifrunner.gnm1.ann1.072U0I Arachis hypogaea HOM05D005196 ORTHO05D006107 1.0e-77 294.3 233 67.4
Eucgr.L03318 Eucalyptus grandis HOM05D005196 ORTHO05D006107 1.4e-76 290.4 210 71.4
CBR_g41628 Chara braunii HOM05D005196 ORTHO05D006107 3.0e-74 282.7 184 73.4
EL10Ac5g12833 Beta vulgaris HOM05D005196 ORTHO05D006107 1.7e-72 276.9 280 57.1
Dinv37598 Davidia involucrata HOM05D005196 ORTHO05D006107 5.3e-71 271.9 215 67.0
Cre12.g503550 Chlamydomonas reinhardtii HOM05D005196 ORTHO05D006107 2.2e-69 266.5 181 70.7
vmacro11408 Vaccinium macrocarpon HOM05D005196 ORTHO05D006107 5.0e-69 265.4 226 65.0
TPR.G6615 Trifolium pratense HOM05D005196 ORTHO05D006107 3.2e-68 262.7 244 59.8
SEGI_11641 Sequoiadendron giganteum HOM05D005196 ORTHO05D006107 2.1e-67 260.0 182 70.9
PRCOL_00001316 Prasinoderma coloniale HOM05D005196 ORTHO05D006107 4.7e-67 258.8 159 71.7
Ah.07g196720 Amaranthus hybridus HOM05D005196 ORTHO05D006107 2.3e-66 256.5 185 72.4
MCO02G159 Micromonas commoda HOM05D005196 ORTHO05D006107 7.0e-63 245.0 165 69.1
Actinidia28347 Actinidia chinensis HOM05D005196 ORTHO05D006107 1.0e-61 241.1 216 61.1
Atru.chr9.2118 Acer truncatum HOM05D005196 ORTHO05D006107 4.8e-56 222.2 122 87.7
CDE11G0665 Ceratophyllum demersum HOM05D005196 ORTHO05D006107 1.2e-49 201.1 135 72.6
Cfa012243 Carpinus fangiana HOM05D005196 ORTHO05D006107 3.4e-49 199.5 169 65.7
TAR629G0373 Trochodendron aralioides HOM05D005196 ORTHO05D006107 1.2e-46 191.0 170 64.7
Psat2g183400 Pisum sativum HOM05D005196 ORTHO05D006107 1.6e-46 190.7 159 64.2
Sed0007168 Sechium edule HOM05D005196 ORTHO05D006107 3.2e-44 183.0 112 83.0
MD06G1092700 Malus domestica HOM05D005196 ORTHO05D006107 1.5e-41 174.1 114 78.9
Zm00001eb187250 Zea mays HOM05D005196 ORTHO05D006107 1.5e-41 174.1 162 61.7
C04p29780 Brassica napus HOM05D005196 ORTHO05D006107 7.5e-41 171.8 104 81.7
BcaC02g10359 Brassica carinata HOM05D005196 ORTHO05D006107 9.8e-41 171.4 104 80.8
Zm00001eb250670 Zea mays HOM05D005196 ORTHO05D006107 5.4e-39 165.6 161 59.0
Gohir.A08G114400 Gossypium hirsutum HOM05D005196 ORTHO05D006107 2.8e-35 153.3 106 73.6
Cfa012242 Carpinus fangiana HOM05D005196 ORTHO05D006107 6.4e-32 142.1 82 85.4
Haze_27119 Corylus avellana HOM05D005196 ORTHO05D006107 2.4e-31 140.2 153 42.5
PSO782G0193 Papaver somniferum HOM05D005196 ORTHO05D006107 5.4e-31 139.0 124 59.7
VMungo0251G1828 Vigna mungo HOM05D005196 ORTHO05D006107 1.2e-30 137.9 78 87.2
AUR62019751 Chenopodium quinoa HOM05D005196 ORTHO05D006107 9.5e-28 128.3 75 84.0
TAR629G1542 Trochodendron aralioides HOM05D005196 ORTHO05D006107 1.1e-26 124.8 71 88.7
CSS0017594 Camellia sinensis var. sinensis HOM05D005196 ORTHO05D006107 2.7e-22 110.2 77 75.3
AagrBONN_evm.TU.Sc2ySwM_344.1771 Anthoceros agrestis HOM05D005196 ORTHO05D006107 2.1e-19 100.5 124 46.0
BolC4t24512H Brassica oleracea HOM05D005196 ORTHO05D006107 4.9e-16 89.4 92 55.4
Gohir.A08G114450 Gossypium hirsutum HOM05D005196 ORTHO05D006107 2.4e-15 87.0 49 81.6
MD14G1120300 Malus domestica HOM05D005196 ORTHO05D006107 6.0e-14 82.4 53 75.5
MD13G1222800 Malus domestica HOM05D005196 ORTHO05D006107 3.1e-10 70.1 47 70.2
C04p29790 Brassica napus HOM05D005196 ORTHO05D006107 3.8e-08 63.2 28 92.9
BolC4t24513H Brassica oleracea HOM05D005196 ORTHO05D006107 3.8e-08 63.2 28 92.9
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 1.9e-07 60.8 32 81.2
Medtr7g053480 Medicago truncatula HOM05D059104 ORTHO05D006107 2.7e-06 57.0 97 41.2


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