Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1036900 Malus domestica HOM05D005655 ORTHO05D007386 2.4e-50 201.8 99 100.0
Prupe.8G045000 Prunus persica HOM05D005655 ORTHO05D007386 3.5e-41 171.4 97 81.4
FAN15G2448 Fragaria x ananassa HOM05D005655 ORTHO05D007386 1.5e-39 166.0 98 80.6
FvH4_2g12780 Fragaria vesca HOM05D005655 ORTHO05D007386 7.2e-39 163.7 98 79.6
RcHm_v2.0_Chr6g0273621 Rosa chinensis HOM05D005655 ORTHO05D007386 8.0e-38 160.2 101 76.2
Ciclev10001190m.g Citrus clementina HOM05D005655 ORTHO05D007386 6.3e-35 150.6 97 71.1
Duzib093G0465 Durio zibethinus HOM05D005655 ORTHO05D007386 1.8e-34 149.1 97 71.1
GSVIVG01013676001 Vitis vinifera HOM05D005655 ORTHO05D007386 2.4e-34 148.7 102 72.5
Lalb_Chr02g0141651 Lupinus albus HOM05D005655 ORTHO05D007386 3.1e-34 148.3 99 73.7
Glyma.20G171733 Glycine max HOM05D005655 ORTHO05D007386 2.0e-33 145.6 99 70.7
FAN24G0542 Fragaria x ananassa HOM05D005655 ORTHO05D007386 2.7e-33 145.2 88 79.5
CiPaw.15G011200 Carya illinoinensis HOM05D005655 ORTHO05D007386 3.8e-32 141.4 97 70.1
Actinidia17754 Actinidia chinensis HOM05D005655 ORTHO05D007386 6.6e-32 140.6 98 70.4
Lj5g0012902 Lotus japonicus HOM05D005655 ORTHO05D007386 8.6e-32 140.2 100 67.0
Cpa.g.sc26.127 Carica papaya HOM05D005655 ORTHO05D007386 1.5e-31 139.4 104 65.4
Potri.002G061650 Populus trichocarpa HOM05D005655 ORTHO05D007386 1.9e-31 139.0 96 70.8
Dinv41018 Davidia involucrata HOM05D005655 ORTHO05D007386 2.5e-31 138.7 95 72.6
Phvul.007G085300 Phaseolus vulgaris HOM05D005655 ORTHO05D007386 5.6e-31 137.5 99 65.7
Gorai.005G076300 Gossypium raimondii HOM05D005655 ORTHO05D007386 7.3e-31 137.1 97 67.0
QL02p036335 Quercus lobata HOM05D005655 ORTHO05D007386 7.3e-31 137.1 100 69.0
TWI74G0660 Tripterygium wilfordii HOM05D005655 ORTHO05D007386 7.3e-31 137.1 99 69.7
CSS0031675 Camellia sinensis var. sinensis HOM05D005655 ORTHO05D007386 1.2e-30 136.3 98 68.4
ECA247G4107 Erigeron canadensis HOM05D005655 ORTHO05D007386 1.6e-30 136.0 98 67.3
SGA_v2.0_scaffold371G50147 Striga asiatica HOM05D005655 ORTHO05D007386 2.1e-30 135.6 95 70.5
arahy.Tifrunner.gnm1.ann1.A75B0U Arachis hypogaea HOM05D005655 ORTHO05D007386 3.6e-30 134.8 97 66.0
Gohir.D02G067400 Gossypium hirsutum HOM05D005655 ORTHO05D007386 3.6e-30 134.8 97 64.9
arahy.Tifrunner.gnm1.ann1.3U6NKV Arachis hypogaea HOM05D005655 ORTHO05D007386 6.1e-30 134.0 97 64.9
CSS0015534 Camellia sinensis var. sinensis HOM05D005655 ORTHO05D007386 1.0e-29 133.3 98 68.4
CANSAT25G2324 Cannabis sativa HOM05D005655 ORTHO05D007386 2.3e-29 132.1 99 66.7
Manes.02G186000 Manihot esculenta HOM05D005655 ORTHO05D007386 5.2e-29 131.0 101 65.3
Sabra02G0049900 Salix brachista HOM05D005655 ORTHO05D007386 5.2e-29 131.0 99 66.7
SalBow6G4612 Salvia bowleyana HOM05D005655 ORTHO05D007386 6.8e-29 130.6 94 70.2
Haze_17834 Corylus avellana HOM05D005655 ORTHO05D007386 8.9e-29 130.2 84 73.8
Haze_17840 Corylus avellana HOM05D005655 ORTHO05D007386 8.9e-29 130.2 84 73.8
Sed0016594 Sechium edule HOM05D005655 ORTHO05D007386 8.9e-29 130.2 96 66.7
Atru.chr13.1965 Acer truncatum HOM05D005655 ORTHO05D007386 1.2e-28 129.8 84 75.0
Migut.N02937 Erythranthe guttata HOM05D005655 ORTHO05D007386 1.2e-28 129.8 96 68.8
Peaxi162Scf00226g00219 Petunia axillaris HOM05D005655 ORTHO05D007386 1.5e-28 129.4 96 66.7
Solyc04g072140.4 Solanum lycopersicum HOM05D005655 ORTHO05D007386 1.5e-28 129.4 96 64.6
PGSC0003DMG400031154 Solanum tuberosum HOM05D005655 ORTHO05D007386 2.0e-28 129.0 94 67.0
Hma1.2p1_0358F.1_g134910 Hydrangea macrophylla HOM05D005655 ORTHO05D007386 2.6e-28 128.6 96 66.7
CAN.G564.32 Capsicum annuum HOM05D005655 ORTHO05D007386 3.4e-28 128.3 98 64.3
Cfa018255 Carpinus fangiana HOM05D005655 ORTHO05D007386 3.4e-28 128.3 84 75.0
Sopen04g028310 Solanum pennellii HOM05D005655 ORTHO05D007386 4.4e-28 127.9 96 64.6
TAR625G0054 Trochodendron aralioides HOM05D005655 ORTHO05D007386 4.4e-28 127.9 99 63.6
MSTRG.22119 Avicennia marina HOM05D005655 ORTHO05D007386 5.7e-28 127.5 96 69.8
TPR.G23158 Trifolium pratense HOM05D005655 ORTHO05D007386 1.3e-27 126.3 96 61.5
HanXRQChr04g0115611 Helianthus annuus HOM05D005655 ORTHO05D007386 2.2e-27 125.6 98 66.3
COL.COLO4_13720 Corchorus olitorius HOM05D005655 ORTHO05D007386 4.9e-27 124.4 84 67.9
Eucgr.F02671 Eucalyptus grandis HOM05D005655 ORTHO05D007386 1.4e-26 122.9 100 62.0
Lj7C387T6 Lonicera japonica HOM05D005655 ORTHO05D007386 1.8e-26 122.5 84 71.4
THA.LOC104816107 Tarenaya hassleriana HOM05D005655 ORTHO05D007386 1.8e-26 122.5 99 65.7
Cc10_g06370 Coffea canephora HOM05D005655 ORTHO05D007386 4.1e-26 121.3 97 63.9
Nn5g28881 Nelumbo nucifera HOM05D005655 ORTHO05D007386 2.7e-25 118.6 95 65.3
vmacro21200 Vaccinium macrocarpon HOM05D005655 ORTHO05D007386 4.6e-25 117.9 84 65.5
Aqoxy5G02015 Aquilegia oxysepala HOM05D005655 ORTHO05D007386 5.9e-25 117.5 97 59.8
Nitab4.5_0000433g0050 Nicotiana tabacum HOM05D005655 ORTHO05D007386 5.9e-25 117.5 87 65.5
Hund26667 Selenicereus undatus HOM05D005655 ORTHO05D007386 5.9e-25 117.5 98 60.2
Rhsim06G0093900 Rhododendron simsii HOM05D005655 ORTHO05D007386 1.0e-24 116.7 84 66.7
PGR042G2919 Punica granatum HOM05D005655 ORTHO05D007386 1.7e-24 115.9 84 67.9
VMungo0720G1747 Vigna mungo HOM05D005655 ORTHO05D007386 1.7e-24 115.9 135 48.9
ClCG08G007170 Citrullus lanatus HOM05D005655 ORTHO05D007386 5.0e-24 114.4 84 66.7
EL10Ac1g01637 Beta vulgaris HOM05D005655 ORTHO05D007386 6.6e-24 114.0 98 61.2
BcaB07g33038 Brassica carinata HOM05D005655 ORTHO05D007386 1.9e-23 112.5 98 57.1
MELO3C019957.2 Cucumis melo HOM05D005655 ORTHO05D007386 2.5e-23 112.1 87 65.5
Thhalv10007608m.g Eutrema salsugineum HOM05D005655 ORTHO05D007386 5.6e-23 110.9 98 56.1
Nitab4.5_0001000g0130 Nicotiana tabacum HOM05D005655 ORTHO05D007386 7.3e-23 110.5 87 64.4
BcaC08g43808 Brassica carinata HOM05D005655 ORTHO05D007386 9.5e-23 110.2 98 57.1
Lsat_1_v5_gn_1_5920 Lactuca sativa HOM05D005655 ORTHO05D007386 1.6e-22 109.4 84 64.3
unitig_21.g20593 Utricularia gibba HOM05D005655 ORTHO05D007386 2.8e-22 108.6 115 50.4
Sp1g29390 Schrenkiella parvula HOM05D005655 ORTHO05D007386 3.6e-22 108.2 98 55.1
CsaV3_6G004840 Cucumis sativus L. HOM05D005655 ORTHO05D007386 1.4e-21 106.3 84 65.5
Ca_10644_v3 Cicer arietinum L. HOM05D005655 ORTHO05D007386 5.2e-21 104.4 87 57.5
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 6.8e-21 104.0 99 57.6
PSO170G2558 Papaver somniferum HOM05D005655 ORTHO05D007386 6.8e-21 104.0 97 56.7
AT1G34150 Arabidopsis thaliana HOM05D005655 ORTHO05D007386 1.5e-20 102.8 102 49.0
Carub.0001s3222 Capsella rubella HOM05D005655 ORTHO05D007386 3.4e-20 101.7 101 51.5
PSO210G7095 Papaver somniferum HOM05D005655 ORTHO05D007386 3.4e-20 101.7 97 55.7
AL1G48650 Arabidopsis lyrata HOM05D005655 ORTHO05D007386 4.4e-20 101.3 101 51.5
MBI05_g00396_MAGBIO Magnolia biondii HOM05D001233 ORTHO05D001233 9.8e-20 100.1 93 62.4
AUR62022311 Chenopodium quinoa HOM05D005655 ORTHO05D007386 1.4e-18 96.3 86 58.1
Glyma.20G171700 Glycine max HOM05D005655 ORTHO05D007386 4.1e-18 94.7 57 73.7
A09p32350 Brassica napus HOM05D005655 ORTHO05D000003 5.4e-18 94.4 85 56.5
C06p11890 Brassica napus HOM05D005655 ORTHO05D000003 9.2e-18 93.6 85 56.5
BolC6t36321H Brassica oleracea HOM05D005655 ORTHO05D000003 9.2e-18 93.6 85 56.5
Zm00001eb018490 Zea mays HOM05D005655 ORTHO05D007386 9.2e-18 93.6 97 51.5
Glyma.10G220000 Glycine max HOM05D005655 ORTHO05D007386 4.6e-17 91.3 57 70.2
arahy.Tifrunner.gnm1.ann1.15WA1E Arachis hypogaea HOM05D005655 ORTHO05D007386 1.7e-16 89.4 97 47.4
Os03g0381100 Oryza sativa ssp. japonica HOM05D005655 ORTHO05D007386 1.7e-16 89.4 98 54.1
Ah.02g115760 Amaranthus hybridus HOM05D005655 ORTHO05D007386 2.3e-16 89.0 92 53.3
DCAR_013167 Daucus carota HOM05D005655 ORTHO05D007386 3.9e-16 88.2 54 74.1
SHI09123 Sapria himalayana HOM05D005655 ORTHO05D007386 1.9e-15 85.9 84 54.8
Psat6g189760 Pisum sativum HOM05D005655 ORTHO05D007386 2.8e-14 82.0 56 66.1
SEGI_11089 Sequoiadendron giganteum HOM05D005655 ORTHO05D007386 4.7e-14 81.3 87 46.0
Medtr1g097390 Medicago truncatula HOM05D005655 ORTHO05D007386 1.1e-13 80.1 54 66.7
Aa31LG6G8320 Aethionema arabicum HOM05D005655 ORTHO05D000003 2.0e-12 75.9 64 54.7
Gohir.A02G061800 Gossypium hirsutum HOM05D005655 ORTHO05D007386 5.8e-12 74.3 47 70.2
AagrBONN_evm.TU.Sc2ySwM_368.1575 Anthoceros agrestis HOM05D005655 ORTHO05D007386 2.1e-09 65.9 95 35.8
Mapoly0139s0011 Marchantia polymorpha HOM05D005655 ORTHO05D007386 4.6e-09 64.7 94 41.5
Pp3c9_3740 Physcomitrium patens HOM05D005655 ORTHO05D007386 5.1e-08 61.2 97 35.1
arahy.Tifrunner.gnm1.ann1.29RT0M Arachis hypogaea HOM05D005655 ORTHO05D007386 2.5e-07 58.9 34 70.6


User provided reference genes

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