Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD04G1054800 Malus domestica HOM05D001887 ORTHO05D006549 1.8e-63 245.7 122 100.0
MD06G1046600 Malus domestica HOM05D001887 ORTHO05D006549 1.0e-42 176.8 123 76.4
COL.COLO4_06683 Corchorus olitorius HOM05D001887 ORTHO05D006549 6.6e-42 174.1 123 74.0
Thecc.03G239300 Theobroma cacao HOM05D001887 ORTHO05D006549 8.6e-42 173.7 123 74.0
Haze_08360 Corylus avellana HOM05D001887 ORTHO05D006549 1.1e-41 173.3 123 74.0
Glyma.11G038500 Glycine max HOM05D001887 ORTHO05D006549 1.1e-41 173.3 123 74.0
Lj2g0012346 Lotus japonicus HOM05D001887 ORTHO05D006549 1.1e-41 173.3 123 74.0
Lalb_Chr09g0324141 Lupinus albus HOM05D001887 ORTHO05D006549 1.1e-41 173.3 123 73.2
Phvul.002G001900 Phaseolus vulgaris HOM05D001887 ORTHO05D006549 1.1e-41 173.3 123 74.0
Prupe.5G054900 Prunus persica HOM05D001887 ORTHO05D006549 1.1e-41 173.3 123 74.0
VMungo1215G0420 Vigna mungo HOM05D001887 ORTHO05D006549 1.1e-41 173.3 123 74.0
FAN18G1605 Fragaria x ananassa HOM05D001887 ORTHO05D006549 1.5e-41 172.9 123 74.8
Gohir.D08G182700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 1.5e-41 172.9 123 74.0
Gorai.004G191700 Gossypium raimondii HOM05D001887 ORTHO05D006549 1.5e-41 172.9 123 74.0
Ciclev10024418m.g Citrus clementina HOM05D001887 ORTHO05D006549 1.9e-41 172.6 122 74.6
FvH4_5g20470 Fragaria vesca HOM05D001887 ORTHO05D006549 2.5e-41 172.2 123 74.8
FAN13G0006 Fragaria x ananassa HOM05D001887 ORTHO05D006549 2.5e-41 172.2 123 74.8
arahy.Tifrunner.gnm1.ann1.B9CQCD Arachis hypogaea HOM05D001887 ORTHO05D006549 3.3e-41 171.8 123 73.2
arahy.Tifrunner.gnm1.ann1.HW9JRE Arachis hypogaea HOM05D001887 ORTHO05D006549 3.3e-41 171.8 123 73.2
Cfa012332 Carpinus fangiana HOM05D001887 ORTHO05D006549 3.3e-41 171.8 123 73.2
QL12p008620 Quercus lobata HOM05D001887 ORTHO05D006549 3.3e-41 171.8 123 72.4
TWI81G0509 Tripterygium wilfordii HOM05D001887 ORTHO05D006549 3.3e-41 171.8 123 73.2
Duzib205G1274 Durio zibethinus HOM05D001887 ORTHO05D006549 7.3e-41 170.6 123 72.4
RcHm_v2.0_Chr7g0205791 Rosa chinensis HOM05D001887 ORTHO05D006549 1.2e-40 169.9 123 74.0
CiPaw.11G072100 Carya illinoinensis HOM05D001887 ORTHO05D006549 1.6e-40 169.5 123 71.5
Ca_24613_v3 Cicer arietinum L. HOM05D001887 ORTHO05D006549 1.6e-40 169.5 122 72.1
Cpa.g.c28699.1 Carica papaya HOM05D001887 ORTHO05D006549 2.1e-40 169.1 122 73.0
Potri.001G150400 Populus trichocarpa HOM05D001887 ORTHO05D006549 2.8e-40 168.7 123 72.4
CSS0023599 Camellia sinensis var. sinensis HOM05D001887 ORTHO05D006549 3.6e-40 168.3 122 72.1
GSVIVG01002051001 Vitis vinifera HOM05D001887 ORTHO05D006549 3.6e-40 168.3 121 72.7
Manes.01G089700 Manihot esculenta HOM05D001887 ORTHO05D006549 6.2e-40 167.5 123 71.5
Hund14477 Selenicereus undatus HOM05D001887 ORTHO05D006549 6.2e-40 167.5 122 71.3
MELO3C003338.2 Cucumis melo HOM05D001887 ORTHO05D006549 1.1e-39 166.8 123 70.7
CsaV3_3G049790 Cucumis sativus L. HOM05D001887 ORTHO05D006549 1.1e-39 166.8 123 70.7
Sed0013079 Sechium edule HOM05D001887 ORTHO05D006549 1.1e-39 166.8 123 70.7
Actinidia02198 Actinidia chinensis HOM05D001887 ORTHO05D006549 2.3e-39 165.6 122 69.7
AUR62007171 Chenopodium quinoa HOM05D001887 ORTHO05D006549 2.3e-39 165.6 122 71.3
AUR62018833 Chenopodium quinoa HOM05D001887 ORTHO05D006549 2.3e-39 165.6 122 71.3
ClCG09G012670 Citrullus lanatus HOM05D001887 ORTHO05D006549 2.3e-39 165.6 123 69.9
Cc08_g11250 Coffea canephora HOM05D001887 ORTHO05D006549 2.3e-39 165.6 122 70.5
CANSAT21G2194 Cannabis sativa HOM05D001887 ORTHO05D006549 3.1e-39 165.2 123 70.7
Medtr5g013480 Medicago truncatula HOM05D001887 ORTHO05D006549 3.1e-39 165.2 122 70.5
Psat2g175720 Pisum sativum HOM05D001887 ORTHO05D006549 3.1e-39 165.2 122 70.5
TAR636G0264 Trochodendron aralioides HOM05D001887 ORTHO05D006549 4.0e-39 164.9 123 69.1
MBI04_g38561_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 5.2e-39 164.5 122 69.7
Ah.07g199260 Amaranthus hybridus HOM05D001887 ORTHO05D006549 1.5e-38 162.9 122 68.0
PGR042G1059 Punica granatum HOM05D001887 ORTHO05D006549 1.5e-38 162.9 122 69.7
THA.LOC104807928 Tarenaya hassleriana HOM05D001887 ORTHO05D006549 2.0e-38 162.5 122 71.3
Nitab4.5_0003335g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 2.6e-38 162.2 121 71.1
Nitab4.5_0004227g0030 Nicotiana tabacum HOM05D001887 ORTHO05D006549 2.6e-38 162.2 121 71.1
Oeu028057.3 Olea europaea HOM05D001887 ORTHO05D006549 2.6e-38 162.2 122 69.7
Peaxi162Scf00301g00615 Petunia axillaris HOM05D001887 ORTHO05D006549 2.6e-38 162.2 121 71.1
TPR.G31432 Trifolium pratense HOM05D001887 ORTHO05D006549 2.6e-38 162.2 122 69.7
CAN.G572.14 Capsicum annuum HOM05D001887 ORTHO05D006549 3.4e-38 161.8 121 70.2
Sabra01G0120200 Salix brachista HOM05D001887 ORTHO05D006549 3.4e-38 161.8 122 70.5
Eucgr.E00349 Eucalyptus grandis HOM05D001887 ORTHO05D006549 4.4e-38 161.4 122 69.7
Lj8C277T15 Lonicera japonica HOM05D001887 ORTHO05D006549 4.4e-38 161.4 122 68.9
Rhsim07G0136100 Rhododendron simsii HOM05D001887 ORTHO05D006549 4.4e-38 161.4 122 69.7
Solyc08g077800.4 Solanum lycopersicum HOM05D001887 ORTHO05D006549 5.8e-38 161.0 121 70.2
PGSC0003DMG400026214 Solanum tuberosum HOM05D001887 ORTHO05D006549 5.8e-38 161.0 121 70.2
Nn1g00744 Nelumbo nucifera HOM05D001887 ORTHO05D006549 7.6e-38 160.6 122 68.9
Aa31LG9G15130 Aethionema arabicum HOM05D001887 ORTHO05D006549 9.9e-38 160.2 123 67.5
CDE02G0676 Ceratophyllum demersum HOM05D001887 ORTHO05D006549 9.9e-38 160.2 122 68.0
SalBow1G0188 Salvia bowleyana HOM05D001887 ORTHO05D006549 9.9e-38 160.2 123 68.3
vmacro00747 Vaccinium macrocarpon HOM05D001887 ORTHO05D006549 9.9e-38 160.2 122 69.7
Thhalv10027633m.g Eutrema salsugineum HOM05D001887 ORTHO05D006549 1.3e-37 159.8 122 68.0
Gohir.A08G162700 Gossypium hirsutum HOM05D001887 ORTHO05D006549 1.3e-37 159.8 101 79.2
SGA_v2.0_scaffold6G03161 Striga asiatica HOM05D001887 ORTHO05D006549 1.3e-37 159.8 122 69.7
Sopen08g026310 Solanum pennellii HOM05D001887 ORTHO05D006549 1.7e-37 159.5 122 68.9
ATR0665G232 Amborella trichopoda HOM05D001887 ORTHO05D006549 2.2e-37 159.1 122 67.2
DCAR_000656 Daucus carota HOM05D001887 ORTHO05D006549 2.2e-37 159.1 122 67.2
BcaC02g08980 Brassica carinata HOM05D001887 ORTHO05D006549 6.4e-37 157.5 122 67.2
A04p14190 Brassica napus HOM05D001887 ORTHO05D006549 6.4e-37 157.5 122 67.2
C04p48230 Brassica napus HOM05D001887 ORTHO05D006549 6.4e-37 157.5 122 67.2
BolC4t26415H Brassica oleracea HOM05D001887 ORTHO05D006549 6.4e-37 157.5 122 67.2
BraA04t17079Z Brassica rapa HOM05D001887 ORTHO05D006549 6.4e-37 157.5 122 67.2
Lsat_1_v5_gn_3_15381 Lactuca sativa HOM05D001887 ORTHO05D006549 8.3e-37 157.1 122 68.0
Os03g0100400 Oryza sativa ssp. japonica HOM05D001887 ORTHO05D006549 8.3e-37 157.1 122 66.4
AL7G48280 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 1.1e-36 156.8 122 67.2
AL7G48350 Arabidopsis lyrata HOM05D001887 ORTHO05D006549 1.1e-36 156.8 122 67.2
Aqoxy7G00853 Aquilegia oxysepala HOM05D001887 ORTHO05D006549 1.4e-36 156.4 122 66.4
BcaB06g27602 Brassica carinata HOM05D001887 ORTHO05D006549 1.9e-36 156.0 122 66.4
CARHR213220 Cardamine hirsuta HOM05D001887 ORTHO05D006549 1.9e-36 156.0 122 67.2
Carub.0007s3432 Capsella rubella HOM05D001887 ORTHO05D006549 2.4e-36 155.6 122 66.4
Sp7g00750 Schrenkiella parvula HOM05D001887 ORTHO05D006549 2.4e-36 155.6 122 66.4
SpUn0010_0230 Schrenkiella parvula HOM05D001887 ORTHO05D006549 2.4e-36 155.6 122 66.4
HPP92_001389 Vanilla planifolia HOM05D001887 ORTHO05D006549 2.4e-36 155.6 122 63.1
AT5G41150 Arabidopsis thaliana HOM05D001887 ORTHO05D006549 3.2e-36 155.2 122 65.6
ECA246G2103 Erigeron canadensis HOM05D001887 ORTHO05D006549 7.1e-36 154.1 122 65.6
SEGI_01687 Sequoiadendron giganteum HOM05D001887 ORTHO05D006549 7.1e-36 154.1 122 64.8
Migut.E01262 Erythranthe guttata HOM05D001887 ORTHO05D006549 9.2e-36 153.7 122 67.2
Migut.E01632 Erythranthe guttata HOM05D001887 ORTHO05D006549 9.2e-36 153.7 122 67.2
HanXRQChr01g0016001 Helianthus annuus HOM05D001887 ORTHO05D006549 9.2e-36 153.7 122 66.4
PSO675G3297 Papaver somniferum HOM05D001887 ORTHO05D006549 1.2e-35 153.3 122 65.6
SMO118G0017 Selaginella moellendorffii HOM05D001887 ORTHO05D006549 1.2e-35 153.3 121 62.8
unitig_699.g19770 Utricularia gibba HOM05D001887 ORTHO05D006549 2.1e-35 152.5 122 65.6
Mapoly0007s0092 Marchantia polymorpha HOM05D001887 ORTHO05D006549 6.0e-35 151.0 121 62.8
Zm00001eb208390 Zea mays HOM05D001887 ORTHO05D006549 6.0e-35 151.0 122 63.9
EL10Ac5g12260 Beta vulgaris HOM05D001887 ORTHO05D006549 2.3e-34 149.1 148 58.1
AagrBONN_evm.TU.Sc2ySwM_344.3532 Anthoceros agrestis HOM05D001887 ORTHO05D006549 8.6e-34 147.1 121 62.0
Pp3c18_11670 Physcomitrium patens HOM05D001887 ORTHO05D006549 1.1e-33 146.7 121 62.8
HPP92_012638 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.5e-33 146.4 122 60.7
CBR_g39228 Chara braunii HOM05D001887 ORTHO05D006549 6.4e-29 131.0 120 55.8
Hma1.2p1_3159F.1_g333410 Hydrangea macrophylla HOM05D001887 ORTHO05D006549 6.2e-24 114.4 84 67.9
Cre06.g311400 Chlamydomonas reinhardtii HOM05D001887 ORTHO05D006549 2.4e-23 112.5 86 58.1
Glyma.01G204533 Glycine max HOM05D001887 ORTHO05D006549 2.9e-21 105.5 87 65.5
GSVIVG01002647001 Vitis vinifera HOM05D001887 ORTHO05D006549 1.1e-20 103.6 85 65.9
MSTRG.13777 Avicennia marina HOM05D001887 ORTHO05D006549 7.9e-19 97.4 94 57.4
MBI04_g36289_MAGBIO Magnolia biondii HOM05D001887 ORTHO05D006549 7.9e-19 97.4 86 60.5
PRCOL_00000830 Prasinoderma coloniale HOM05D001887 ORTHO05D006549 3.9e-18 95.1 83 51.8
HPP92_000025 Vanilla planifolia HOM05D001887 ORTHO05D006549 2.1e-16 89.4 85 51.8
HPP92_028027 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.1e-15 87.0 85 51.8
MCO16G346 Micromonas commoda HOM05D001887 ORTHO05D006549 9.9e-14 80.5 83 44.6
HPP92_002782 Vanilla planifolia HOM05D001887 ORTHO05D006549 1.1e-12 77.0 85 47.1
Cfa026920 Carpinus fangiana HOM05D001887 ORTHO05D006549 4.2e-12 75.1 109 43.1
Dinv25138 Davidia involucrata HOM05D001887 ORTHO05D006549 1.1e-09 67.0 36 86.1
HPP92_028028 Vanilla planifolia HOM05D001887 ORTHO05D006549 7.4e-09 64.3 36 86.1


User provided reference genes

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