Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO16G526 Micromonas commoda HOM05D005206 ORTHO05D006219 0.0e+00 1469.9 743 100.0
PRCOL_00003765 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 6.8e-57 226.5 415 38.6
Os06g0237200 Oryza sativa ssp. japonica HOM05D005206 ORTHO05D006219 1.1e-38 166.0 587 26.9
HanXRQChr16g0527551 Helianthus annuus HOM05D005206 ORTHO05D006219 9.3e-38 162.9 557 26.0
Mapoly0078s0005 Marchantia polymorpha HOM05D005206 ORTHO05D006219 1.2e-37 162.5 370 30.0
Pp3c15_19010 Physcomitrium patens HOM05D005206 ORTHO05D006219 3.5e-37 161.0 377 28.4
CBR_g3482 Chara braunii HOM05D005206 ORTHO05D006219 2.3e-36 158.3 340 33.8
Lsat_1_v5_gn_9_83200 Lactuca sativa HOM05D005206 ORTHO05D006219 2.3e-36 158.3 552 26.1
GSVIVG01020174001 Vitis vinifera HOM05D005206 ORTHO05D006219 2.3e-36 158.3 586 26.5
FvH4_4g35030 Fragaria vesca HOM05D005206 ORTHO05D006219 3.0e-36 157.9 559 26.3
RcHm_v2.0_Chr4g0444541 Rosa chinensis HOM05D005206 ORTHO05D006219 3.9e-36 157.5 549 26.6
unitig_748.g7742 Utricularia gibba HOM05D005206 ORTHO05D006219 5.1e-36 157.1 373 29.5
CBR_g48616 Chara braunii HOM05D005206 ORTHO05D006219 1.1e-35 156.0 538 28.4
Sc11g0001370 Simmondsia chinensis HOM05D005206 ORTHO05D006219 1.9e-35 155.2 582 25.3
AagrBONN_evm.TU.Sc2ySwM_344.2272 Anthoceros agrestis HOM05D005206 ORTHO05D006219 2.5e-35 154.8 580 27.2
FvH4_4g35010 Fragaria vesca HOM05D005206 ORTHO05D006219 4.3e-35 154.1 548 26.3
Lj2g0017178 Lotus japonicus HOM05D005206 ORTHO05D006219 1.3e-34 152.5 584 26.2
arahy.Tifrunner.gnm1.ann1.05N2IU Arachis hypogaea HOM05D005206 ORTHO05D006219 1.6e-34 152.1 571 25.2
Phvul.004G071000 Phaseolus vulgaris HOM05D005206 ORTHO05D006219 1.6e-34 152.1 563 25.2
RcHm_v2.0_Chr4g0444551 Rosa chinensis HOM05D005206 ORTHO05D006219 2.8e-34 151.4 564 26.2
Hma1.2p1_1049F.1_g251730 Hydrangea macrophylla HOM05D005206 ORTHO05D006219 4.8e-34 150.6 560 26.2
Lj3A1048T22 Lonicera japonica HOM05D005206 ORTHO05D006219 4.8e-34 150.6 567 25.0
Nitab4.5_0005722g0070 Nicotiana tabacum HOM05D005206 ORTHO05D006219 6.2e-34 150.2 569 25.7
Eucgr.B02561 Eucalyptus grandis HOM05D005206 ORTHO05D006219 1.1e-33 149.4 568 26.4
Zm00001eb371940 Zea mays HOM05D005206 ORTHO05D006219 1.1e-33 149.4 597 26.6
Atru.chr11.1960 Acer truncatum HOM05D005206 ORTHO05D006219 1.4e-33 149.1 379 28.8
CiPaw.06G074900 Carya illinoinensis HOM05D005206 ORTHO05D006219 1.4e-33 149.1 422 28.0
Dinv31107 Davidia involucrata HOM05D005206 ORTHO05D006219 1.4e-33 149.1 379 29.3
Dinv30996 Davidia involucrata HOM05D005206 ORTHO05D006219 1.8e-33 148.7 580 25.9
CsaV3_5G031880 Cucumis sativus L. HOM05D005206 ORTHO05D006219 2.4e-33 148.3 566 25.1
Lalb_Chr09g0326511 Lupinus albus HOM05D005206 ORTHO05D006219 2.4e-33 148.3 585 26.2
CANSAT56G0905 Cannabis sativa HOM05D005206 ORTHO05D006219 4.0e-33 147.5 551 25.4
QL03p062489 Quercus lobata HOM05D005206 ORTHO05D006219 4.0e-33 147.5 379 28.2
PSO063G3522 Papaver somniferum HOM05D005206 ORTHO05D006219 5.3e-33 147.1 379 29.0
SMO353G0008 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 5.3e-33 147.1 384 29.2
Sed0001006 Sechium edule HOM05D005206 ORTHO05D006219 6.9e-33 146.7 560 24.5
Aqoxy3G03082 Aquilegia oxysepala HOM05D005206 ORTHO05D006219 9.0e-33 146.4 380 28.7
SMO235G0045 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 9.0e-33 146.4 357 31.4
TWI36G1721 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 9.0e-33 146.4 569 26.4
Nitab4.5_0000257g0230 Nicotiana tabacum HOM05D005206 ORTHO05D006219 1.2e-32 146.0 577 25.8
Gorai.002G164200 Gossypium raimondii HOM05D005206 ORTHO05D006219 1.5e-32 145.6 379 29.6
CARHR010660 Cardamine hirsuta HOM05D005206 ORTHO05D006219 2.0e-32 145.2 566 26.7
PSO832G4147 Papaver somniferum HOM05D005206 ORTHO05D006219 2.0e-32 145.2 379 28.8
Mapoly0057s0101 Marchantia polymorpha HOM05D005206 ORTHO05D006219 2.6e-32 144.8 385 28.6
Medtr7g039450 Medicago truncatula HOM05D005206 ORTHO05D006219 2.6e-32 144.8 567 26.3
THA.LOC104816736 Tarenaya hassleriana HOM05D005206 ORTHO05D006219 3.4e-32 144.4 581 25.3
Medtr5g040170 Medicago truncatula HOM05D005206 ORTHO05D006219 4.5e-32 144.1 567 26.1
vmacro16280 Vaccinium macrocarpon HOM05D005206 ORTHO05D006219 4.5e-32 144.1 558 25.4
DCAR_007103 Daucus carota HOM05D005206 ORTHO05D006219 5.8e-32 143.7 378 28.8
Cfa026399 Carpinus fangiana HOM05D005206 ORTHO05D006219 7.6e-32 143.3 401 29.9
Ciclev10031184m.g Citrus clementina HOM05D005206 ORTHO05D006219 7.6e-32 143.3 378 28.8
SEGI_33189 Sequoiadendron giganteum HOM05D005206 ORTHO05D006219 7.6e-32 143.3 377 27.3
Manes.01G196700 Manihot esculenta HOM05D005206 ORTHO05D006219 9.9e-32 142.9 380 28.9
ATR1149G100 Amborella trichopoda HOM05D005206 ORTHO05D006219 1.7e-31 142.1 383 29.8
Hund25315 Selenicereus undatus HOM05D005206 ORTHO05D006219 2.9e-31 141.4 594 25.6
arahy.Tifrunner.gnm1.ann1.U6W7RM Arachis hypogaea HOM05D005206 ORTHO05D006219 3.8e-31 141.0 347 28.8
CAN.G1160.5 Capsicum annuum HOM05D005206 ORTHO05D006219 4.9e-31 140.6 575 24.7
Gohir.A01G141200 Gossypium hirsutum HOM05D005206 ORTHO05D006219 4.9e-31 140.6 381 29.1
Solyc05g006120.3 Solanum lycopersicum HOM05D005206 ORTHO05D006219 4.9e-31 140.6 574 25.6
Thecc.02G242400 Theobroma cacao HOM05D005206 ORTHO05D006219 6.4e-31 140.2 376 29.0
ECA236G3606 Erigeron canadensis HOM05D005206 ORTHO05D006219 8.4e-31 139.8 572 25.0
MD16G1086700 Malus domestica HOM05D005206 ORTHO05D006219 1.1e-30 139.4 306 30.1
Sopen05g002140 Solanum pennellii HOM05D005206 ORTHO05D006219 1.1e-30 139.4 572 25.2
Aa31LG1G4440 Aethionema arabicum HOM05D005206 ORTHO05D006219 1.4e-30 139.0 568 25.0
Glyma.02G065600 Glycine max HOM05D005206 ORTHO05D006219 1.4e-30 139.0 577 25.1
Sp1g09150 Schrenkiella parvula HOM05D005206 ORTHO05D006219 1.4e-30 139.0 571 25.2
SMO347G0124 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 1.4e-30 139.0 360 30.6
Nn4g22885 Nelumbo nucifera HOM05D005206 ORTHO05D006219 1.9e-30 138.7 375 28.3
Carub.0001s0995 Capsella rubella HOM05D005206 ORTHO05D006219 3.2e-30 137.9 571 24.9
MBI15_g34233_MAGBIO Magnolia biondii HOM05D005206 ORTHO05D006219 4.2e-30 137.5 344 29.1
BcaC07g38608 Brassica carinata HOM05D005206 ORTHO05D006219 5.4e-30 137.1 580 25.5
Haze_12137 Corylus avellana HOM05D005206 ORTHO05D006219 5.4e-30 137.1 388 27.6
Migut.L01447 Erythranthe guttata HOM05D005206 ORTHO05D006219 5.4e-30 137.1 569 23.9
BolC8t49011H Brassica oleracea HOM05D005206 ORTHO05D006219 7.1e-30 136.7 571 26.3
CSS0048376 Camellia sinensis var. sinensis HOM05D005206 ORTHO05D006219 9.3e-30 136.3 387 27.9
Rhsim12G0124400 Rhododendron simsii HOM05D005206 ORTHO05D006219 1.2e-29 136.0 580 25.5
BcaC07g38570 Brassica carinata HOM05D005206 ORTHO05D006219 1.6e-29 135.6 567 25.9
C08p13780 Brassica napus HOM05D005206 ORTHO05D006219 1.6e-29 135.6 567 25.9
BraA08t35305Z Brassica rapa HOM05D005206 ORTHO05D006219 1.6e-29 135.6 553 26.6
C08p13760 Brassica napus HOM05D005206 ORTHO05D006219 2.1e-29 135.2 579 25.9
Actinidia15006 Actinidia chinensis HOM05D005206 ORTHO05D006219 3.5e-29 134.4 382 28.5
AagrBONN_evm.TU.Sc2ySwM_362.251 Anthoceros agrestis HOM05D005206 ORTHO05D006219 4.6e-29 134.0 533 28.1
Duzib248G0782 Durio zibethinus HOM05D005206 ORTHO05D006219 4.6e-29 134.0 379 27.7
Potri.010G094800 Populus trichocarpa HOM05D005206 ORTHO05D006219 4.6e-29 134.0 573 25.1
TAR371G0117 Trochodendron aralioides HOM05D005206 ORTHO05D006219 1.0e-28 132.9 378 27.5
Thhalv10009477m.g Eutrema salsugineum HOM05D005206 ORTHO05D006219 1.8e-28 132.1 562 25.1
EL10Ac8g20565 Beta vulgaris HOM05D005206 ORTHO05D006219 2.3e-28 131.7 385 28.6
AUR62039408 Chenopodium quinoa HOM05D005206 ORTHO05D006219 3.9e-28 131.0 385 26.8
PGR119G2380 Punica granatum HOM05D005206 ORTHO05D006219 3.9e-28 131.0 592 25.5
MSTRG.7873 Avicennia marina HOM05D005206 ORTHO05D006219 6.7e-28 130.2 567 24.3
TPR.G13491 Trifolium pratense HOM05D005206 ORTHO05D006219 8.7e-28 129.8 528 24.8
Ah.03g132350 Amaranthus hybridus HOM05D005206 ORTHO05D006219 1.1e-27 129.4 596 24.3
SalBow2G2775 Salvia bowleyana HOM05D005206 ORTHO05D006219 1.1e-27 129.4 577 23.7
AL1G21320 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 1.9e-27 128.6 493 25.8
Gohir.D01G132600 Gossypium hirsutum HOM05D005206 ORTHO05D006219 3.3e-27 127.9 334 29.6
SGA_v2.0_scaffold166G38340 Striga asiatica HOM05D005206 ORTHO05D006219 3.3e-27 127.9 663 24.0
Sabra10G0067100 Salix brachista HOM05D005206 ORTHO05D006219 1.3e-26 125.9 407 26.8
Prupe.1G259900 Prunus persica HOM05D005206 ORTHO05D006219 6.2e-26 123.6 372 28.0
A08p33920 Brassica napus HOM05D005206 ORTHO05D006219 1.8e-25 122.1 577 25.5
ClCG05G025020 Citrullus lanatus HOM05D005206 ORTHO05D006219 4.0e-25 120.9 562 23.8
AT1G10520 Arabidopsis thaliana HOM05D005206 ORTHO05D006219 1.2e-24 119.4 507 24.3
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 2.0e-24 118.6 586 23.7
TWI36G0196 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 5.8e-24 117.1 506 25.5
COL.COLO4_38096 Corchorus olitorius HOM05D005206 ORTHO05D006219 9.9e-24 116.3 265 30.2
AL1G24280 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 6.4e-23 113.6 311 28.0
Ca_18093_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 5.5e-22 110.5 543 24.7
Peaxi162Scf00421g00833 Petunia axillaris HOM05D005206 ORTHO05D006219 5.5e-22 110.5 579 22.8
Psat2g114280 Pisum sativum HOM05D005206 ORTHO05D006219 1.6e-21 109.0 503 23.1
FAN12G3755 Fragaria x ananassa HOM05D005206 ORTHO05D006219 7.9e-21 106.7 559 22.7
Hund05954 Selenicereus undatus HOM05D005206 ORTHO05D006219 3.0e-20 104.8 421 25.2
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.5e-19 102.4 545 22.8
MELO3C034123.2 Cucumis melo HOM05D005206 ORTHO05D006219 4.3e-19 100.9 600 22.8
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 9.0e-17 93.2 240 27.1
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 9.0e-17 93.2 554 21.5
FAN07G1959 Fragaria x ananassa HOM05D005206 ORTHO05D006219 4.5e-16 90.9 305 25.9
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 1.6e-13 82.4 243 28.4
Cc11_g14240 Coffea canephora HOM05D005206 ORTHO05D006219 1.3e-12 79.3 203 28.6
PGSC0003DMG400015600 Solanum tuberosum HOM05D005206 ORTHO05D006219 1.3e-12 79.3 203 27.6
Oeu025446.1 Olea europaea HOM05D005206 ORTHO05D006219 1.9e-11 75.5 183 28.4
SHI08107 Sapria himalayana HOM05D005206 ORTHO05D006219 2.5e-11 75.1 190 30.0
QL03p062590 Quercus lobata HOM05D005206 ORTHO05D006219 9.7e-11 73.2 126 31.7
PRCOL_00003580 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 1.3e-10 72.8 186 31.7
FAN17G0295 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.6e-10 72.4 267 26.2
Cpa.g.sc5.345 Carica papaya HOM05D005206 ORTHO05D006219 6.3e-10 70.5 108 35.2
Cc11_g14230 Coffea canephora HOM05D005206 ORTHO05D006219 1.4e-09 69.3 385 24.9
HPP92_017067 Vanilla planifolia HOM05D005206 ORTHO05D006219 1.8e-09 68.9 174 29.9
FAN12G3075 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.0e-08 65.5 111 34.2
HPP92_017072 Vanilla planifolia HOM05D005206 ORTHO05D006219 7.7e-08 63.5 200 24.5
FvH4_6g23350 Fragaria vesca HOM05D005206 ORTHO05D006219 2.5e-06 58.5 88 36.4


User provided reference genes

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