Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO14G225 Micromonas commoda HOM05D005074 ORTHO05D006853 4.9e-120 434.5 220 100.0
Cre06.g297904 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D006853 4.9e-27 125.6 192 37.5
Mapoly0120s0055 Marchantia polymorpha HOM05D005074 ORTHO05D006853 3.5e-25 119.4 192 37.5
SMO119G0484 Selaginella moellendorffii HOM05D005074 ORTHO05D006853 1.7e-24 117.1 213 34.7
PGR031G0257 Punica granatum HOM05D005074 ORTHO05D006853 1.1e-23 114.4 192 34.9
CARHR211670 Cardamine hirsuta HOM05D005074 ORTHO05D006853 1.5e-23 114.0 189 34.9
Sp6g40630 Schrenkiella parvula HOM05D005074 ORTHO05D006853 2.5e-23 113.2 189 34.4
Hma1.2p1_0501F.1_g167650 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 4.3e-23 112.5 189 33.9
Hma1.2p1_0501F.1_g167660 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 4.3e-23 112.5 189 33.9
CANSAT35G1267 Cannabis sativa HOM05D005074 ORTHO05D006853 7.3e-23 111.7 189 34.9
Ah.02g115540 Amaranthus hybridus HOM05D005074 ORTHO05D006853 9.5e-23 111.3 190 35.8
Ca_13410_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 1.2e-22 110.9 190 33.7
Ca_13419_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 1.2e-22 110.9 190 33.7
Hund10968 Selenicereus undatus HOM05D005074 ORTHO05D006853 1.2e-22 110.9 190 34.7
Thecc.05G011500 Theobroma cacao HOM05D005074 ORTHO05D006853 1.2e-22 110.9 229 32.8
A10p33710 Brassica napus HOM05D005074 ORTHO05D006853 1.6e-22 110.5 189 34.4
CAN.G41.5 Capsicum annuum HOM05D005074 ORTHO05D006853 1.6e-22 110.5 189 33.9
Lalb_Chr07g0191391 Lupinus albus HOM05D005074 ORTHO05D006853 1.6e-22 110.5 190 33.2
AL6G10830 Arabidopsis lyrata HOM05D005074 ORTHO05D006853 2.1e-22 110.2 189 33.9
BraA10t45403Z Brassica rapa HOM05D005074 ORTHO05D006853 2.1e-22 110.2 189 34.4
Glyma.01G117800 Glycine max HOM05D005074 ORTHO05D006853 2.1e-22 110.2 190 33.2
HPP92_025102 Vanilla planifolia HOM05D005074 ORTHO05D006853 2.1e-22 110.2 205 32.7
Dinv13134 Davidia involucrata HOM05D005074 ORTHO05D006853 2.8e-22 109.8 189 33.9
THA.LOC104816650 Tarenaya hassleriana HOM05D005074 ORTHO05D006853 2.8e-22 109.8 189 33.9
AT5G01310 Arabidopsis thaliana HOM05D005074 ORTHO05D006853 3.6e-22 109.4 190 34.2
CSS0046053 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 3.6e-22 109.4 214 32.2
AUR62030501 Chenopodium quinoa HOM05D005074 ORTHO05D006853 3.6e-22 109.4 201 33.3
MBI03_g18944_MAGBIO Magnolia biondii HOM05D005074 ORTHO05D006853 3.6e-22 109.4 196 33.7
Psat6g003720 Pisum sativum HOM05D005074 ORTHO05D006853 4.7e-22 109.0 190 31.6
PGSC0003DMG400006257 Solanum tuberosum HOM05D005074 ORTHO05D006853 4.7e-22 109.0 189 33.3
CSS0047541 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 6.1e-22 108.6 214 32.2
Os03g0293400 Oryza sativa ssp. japonica HOM05D005074 ORTHO05D006853 6.1e-22 108.6 192 32.3
Peaxi162Scf01132g00134 Petunia axillaris HOM05D005074 ORTHO05D006853 6.1e-22 108.6 189 33.3
QL08p015889 Quercus lobata HOM05D005074 ORTHO05D006853 6.1e-22 108.6 189 34.4
GSVIVG01003941001 Vitis vinifera HOM05D005074 ORTHO05D006853 6.1e-22 108.6 190 34.2
Pp3c11_18160 Physcomitrium patens HOM05D005074 ORTHO05D006853 8.0e-22 108.2 193 33.2
Solyc09g005100.4 Solanum lycopersicum HOM05D005074 ORTHO05D006853 8.0e-22 108.2 189 32.3
EL10Ac5g12524 Beta vulgaris HOM05D005074 ORTHO05D006853 1.4e-21 107.5 190 35.3
COL.COLO4_14500 Corchorus olitorius HOM05D005074 ORTHO05D006853 1.4e-21 107.5 211 33.2
Phvul.010G073200 Phaseolus vulgaris HOM05D005074 ORTHO05D006853 1.4e-21 107.5 190 32.1
Lj5g0028092 Lotus japonicus HOM05D005074 ORTHO05D006853 1.8e-21 107.1 190 32.6
Nitab4.5_0000195g0210 Nicotiana tabacum HOM05D005074 ORTHO05D006853 1.8e-21 107.1 189 33.3
Sopen09g001080 Solanum pennellii HOM05D005074 ORTHO05D006853 1.8e-21 107.1 188 32.4
Aqoxy4G02460 Aquilegia oxysepala HOM05D005074 ORTHO05D006853 2.3e-21 106.7 208 32.2
Carub.0006s0050 Capsella rubella HOM05D005074 ORTHO05D006853 2.3e-21 106.7 189 32.8
Prupe.6G280900 Prunus persica HOM05D005074 ORTHO05D006853 2.3e-21 106.7 193 32.6
TWI74G0571 Tripterygium wilfordii HOM05D005074 ORTHO05D006853 2.3e-21 106.7 189 33.3
VMungo0331G1905 Vigna mungo HOM05D005074 ORTHO05D006853 2.3e-21 106.7 190 32.1
arahy.Tifrunner.gnm1.ann1.N71AR0 Arachis hypogaea HOM05D005074 ORTHO05D006853 3.0e-21 106.3 194 32.0
BcaC06g31973 Brassica carinata HOM05D005074 ORTHO05D006853 3.0e-21 106.3 214 32.7
C09p74610 Brassica napus HOM05D005074 ORTHO05D006853 4.0e-21 105.9 189 33.3
BolC9t60195H Brassica oleracea HOM05D005074 ORTHO05D006853 4.0e-21 105.9 189 33.3
Manes.09G106200 Manihot esculenta HOM05D005074 ORTHO05D006853 4.0e-21 105.9 190 32.6
SGA_v2.0_scaffold85G26714 Striga asiatica HOM05D005074 ORTHO05D006853 4.0e-21 105.9 217 32.7
Eucgr.A00552 Eucalyptus grandis HOM05D005074 ORTHO05D006853 5.2e-21 105.5 190 32.6
Medtr1g024820 Medicago truncatula HOM05D005074 ORTHO05D006853 5.2e-21 105.5 196 31.6
TAR633G0154 Trochodendron aralioides HOM05D005074 ORTHO05D006853 5.2e-21 105.5 189 32.8
PSO339G4313 Papaver somniferum HOM05D005074 ORTHO05D006853 6.8e-21 105.1 189 34.4
Sabra16G0116100 Salix brachista HOM05D005074 ORTHO05D006853 6.8e-21 105.1 190 33.2
Duzib128G0037 Durio zibethinus HOM05D005074 ORTHO05D006853 8.9e-21 104.8 210 32.9
Nn2g10923 Nelumbo nucifera HOM05D005074 ORTHO05D006853 1.2e-20 104.4 190 32.6
arahy.Tifrunner.gnm1.ann1.W8IS2K Arachis hypogaea HOM05D005074 ORTHO05D006853 1.5e-20 104.0 194 31.4
Cfa017171 Carpinus fangiana HOM05D005074 ORTHO05D006853 1.5e-20 104.0 192 33.3
Haze_21033 Corylus avellana HOM05D005074 ORTHO05D006853 1.5e-20 104.0 190 34.2
Zm00001eb013510 Zea mays HOM05D005074 ORTHO05D006853 1.5e-20 104.0 216 31.0
Actinidia29087 Actinidia chinensis HOM05D005074 ORTHO05D006853 2.0e-20 103.6 205 32.7
CiPaw.10G158300 Carya illinoinensis HOM05D005074 ORTHO05D006853 2.0e-20 103.6 189 33.3
unitig_27.g24848 Utricularia gibba HOM05D005074 ORTHO05D006853 2.0e-20 103.6 195 33.3
Cc06_g01060 Coffea canephora HOM05D005074 ORTHO05D006853 2.6e-20 103.2 191 33.0
FvH4_6g11090 Fragaria vesca HOM05D005074 ORTHO05D006853 2.6e-20 103.2 223 30.5
Lj2C71T3 Lonicera japonica HOM05D005074 ORTHO05D006853 2.6e-20 103.2 189 33.9
Nitab4.5_0012964g0020 Nicotiana tabacum HOM05D005074 ORTHO05D006853 2.6e-20 103.2 190 33.7
Potri.016G120200 Populus trichocarpa HOM05D005074 ORTHO05D006853 2.6e-20 103.2 190 34.2
CsaV3_3G033540 Cucumis sativus L. HOM05D005074 ORTHO05D006853 4.4e-20 102.4 191 34.0
AagrBONN_evm.TU.Sc2ySwM_344.4419 Anthoceros agrestis HOM05D005074 ORTHO05D006853 5.7e-20 102.1 157 37.6
Cpa.g.sc120.24 Carica papaya HOM05D005074 ORTHO05D006853 5.7e-20 102.1 189 34.4
DCAR_006624 Daucus carota HOM05D005074 ORTHO05D006853 5.7e-20 102.1 193 34.2
Gorai.012G116900 Gossypium raimondii HOM05D005074 ORTHO05D006853 5.7e-20 102.1 192 33.3
Rhsim05G0219800 Rhododendron simsii HOM05D005074 ORTHO05D006853 5.7e-20 102.1 212 31.6
MSTRG.18991 Avicennia marina HOM05D005074 ORTHO05D006853 7.5e-20 101.7 190 34.7
Thhalv10012562m.g Eutrema salsugineum HOM05D005074 ORTHO05D006853 7.5e-20 101.7 226 31.4
CDE08G0259 Ceratophyllum demersum HOM05D005074 ORTHO05D006853 9.8e-20 101.3 207 30.9
Gohir.D04G133000 Gossypium hirsutum HOM05D005074 ORTHO05D006853 9.8e-20 101.3 192 33.3
Lsat_1_v5_gn_8_100780 Lactuca sativa HOM05D005074 ORTHO05D006853 1.3e-19 100.9 191 32.5
MELO3C009144.2 Cucumis melo HOM05D005074 ORTHO05D006853 1.7e-19 100.5 191 33.5
ECA236G3605 Erigeron canadensis HOM05D005074 ORTHO05D006853 1.7e-19 100.5 198 31.3
Ciclev10011130m.g Citrus clementina HOM05D005074 ORTHO05D006853 2.2e-19 100.1 189 32.3
PSO384G2802 Papaver somniferum HOM05D005074 ORTHO05D006853 2.2e-19 100.1 215 32.6
ClCG10G022350 Citrullus lanatus HOM05D005074 ORTHO05D006853 2.9e-19 99.8 190 32.6
RcHm_v2.0_Chr3g0462521 Rosa chinensis HOM05D005074 ORTHO05D006853 2.9e-19 99.8 211 32.2
HanXRQChr12g0383191 Helianthus annuus HOM05D005074 ORTHO05D006853 4.9e-19 99.0 207 31.4
Sed0022379 Sechium edule HOM05D005074 ORTHO05D006853 4.9e-19 99.0 190 31.6
Gohir.A04G093700 Gossypium hirsutum HOM05D005074 ORTHO05D006853 8.3e-19 98.2 210 32.4
TPR.G34365 Trifolium pratense HOM05D005074 ORTHO05D006853 8.3e-19 98.2 196 30.1
AUR62030792 Chenopodium quinoa HOM05D005074 ORTHO05D006853 1.1e-18 97.8 180 35.0
Aa31LG1G22940 Aethionema arabicum HOM05D005074 ORTHO05D006853 1.4e-18 97.4 209 31.6
Migut.J00131 Erythranthe guttata HOM05D005074 ORTHO05D006853 3.2e-18 96.3 192 30.2
FAN02G3586 Fragaria x ananassa HOM05D005074 ORTHO05D006853 4.1e-18 95.9 220 31.8
MD04G1160300 Malus domestica HOM05D005074 ORTHO05D006853 5.4e-18 95.5 210 30.5
SalBow5G0276 Salvia bowleyana HOM05D005074 ORTHO05D006853 5.4e-18 95.5 190 33.7
FAN05G5223 Fragaria x ananassa HOM05D005074 ORTHO05D006853 7.0e-18 95.1 233 29.2
SalBow5G3519 Salvia bowleyana HOM05D005074 ORTHO05D006853 7.0e-18 95.1 190 33.7
ATR0716G066 Amborella trichopoda HOM05D005074 ORTHO05D006853 2.0e-17 93.6 224 31.7
FAN14G3962 Fragaria x ananassa HOM05D005074 ORTHO05D006853 2.0e-17 93.6 233 28.3
BcaC06g31962 Brassica carinata HOM05D005074 ORTHO05D006853 4.3e-15 85.9 151 31.8
Cfa025975 Carpinus fangiana HOM05D005074 ORTHO05D006853 1.2e-12 77.8 190 30.5
Glyma.U000401 Glycine max HOM05D005074 ORTHO05D006853 6.4e-11 72.0 167 28.7
Duzib093G1335 Durio zibethinus HOM05D005074 ORTHO05D006853 4.6e-09 65.9 191 27.7
vmacro20302 Vaccinium macrocarpon HOM05D005074 ORTHO05D006853 6.0e-09 65.5 89 31.5


User provided reference genes

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