Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G117 Micromonas commoda HOM05D004852 ORTHO05D006128 0.0e+00 1430.6 856 100.0
Cre12.g550800 Chlamydomonas reinhardtii HOM05D004852 ORTHO05D006128 9.7e-23 113.2 182 36.8
Os06g0691000 Oryza sativa ssp. japonica HOM05D004852 ORTHO05D006128 1.4e-21 109.4 117 49.6
Zm00001eb226110 Zea mays HOM05D004852 ORTHO05D006128 1.2e-20 106.3 115 48.7
CSS0042044 Camellia sinensis var. sinensis HOM05D004852 ORTHO05D006128 2.1e-17 95.5 121 42.1
SMO235G0070 Selaginella moellendorffii HOM05D004852 ORTHO05D006128 3.6e-17 94.7 160 35.6
TPR.G21613 Trifolium pratense HOM05D004852 ORTHO05D006128 8.0e-17 93.6 114 41.2
SMO347G0466 Selaginella moellendorffii HOM05D004852 ORTHO05D006128 1.0e-16 93.2 160 35.0
unitig_26.g10234 Utricularia gibba HOM05D004852 ORTHO05D006128 2.3e-16 92.0 121 40.5
ECA236G4936 Erigeron canadensis HOM05D004852 ORTHO05D006128 3.0e-16 91.7 121 43.0
SalBow3G4263 Salvia bowleyana HOM05D004852 ORTHO05D006128 5.2e-16 90.9 120 39.2
Nitab4.5_0001143g0010 Nicotiana tabacum HOM05D004852 ORTHO05D006128 6.7e-16 90.5 121 41.3
Rhsim05G0088900 Rhododendron simsii HOM05D004852 ORTHO05D006128 6.7e-16 90.5 115 40.0
Hund06310 Selenicereus undatus HOM05D004852 ORTHO05D006128 6.7e-16 90.5 120 41.7
Atru.chr5.2475 Acer truncatum HOM05D004852 ORTHO05D006128 1.1e-15 89.7 122 39.3
DCAR_029088 Daucus carota HOM05D004852 ORTHO05D006128 1.1e-15 89.7 139 37.4
Migut.O00601 Erythranthe guttata HOM05D004852 ORTHO05D006128 1.1e-15 89.7 121 39.7
HanXRQChr17g0570571 Helianthus annuus HOM05D004852 ORTHO05D006128 1.1e-15 89.7 121 42.1
Nitab4.5_0004326g0020 Nicotiana tabacum HOM05D004852 ORTHO05D006128 1.1e-15 89.7 121 40.5
AUR62039064 Chenopodium quinoa HOM05D004852 ORTHO05D006128 1.5e-15 89.4 131 37.4
Aqoxy6G02842 Aquilegia oxysepala HOM05D004852 ORTHO05D006128 2.6e-15 88.6 123 39.0
A06p46930 Brassica napus HOM05D004852 ORTHO05D006128 2.6e-15 88.6 118 39.0
BraA06t27566Z Brassica rapa HOM05D004852 ORTHO05D006128 2.6e-15 88.6 118 39.0
Gohir.D13G043200 Gossypium hirsutum HOM05D004852 ORTHO05D006128 2.6e-15 88.6 120 37.5
Gorai.013G047900 Gossypium raimondii HOM05D004852 ORTHO05D006128 2.6e-15 88.6 120 37.5
Oeu044275.2 Olea europaea HOM05D004852 ORTHO05D006128 2.6e-15 88.6 120 40.8
TAR376G0480 Trochodendron aralioides HOM05D004852 ORTHO05D006128 2.6e-15 88.6 114 41.2
vmacro19454 Vaccinium macrocarpon HOM05D004852 ORTHO05D006128 2.6e-15 88.6 155 34.8
Nn1g04670 Nelumbo nucifera HOM05D004852 ORTHO05D006128 3.3e-15 88.2 119 41.2
Sp2g09590 Schrenkiella parvula HOM05D004852 ORTHO05D006128 3.3e-15 88.2 121 38.0
Actinidia05501 Actinidia chinensis HOM05D004852 ORTHO05D006128 4.4e-15 87.8 121 38.8
CAN.G606.8 Capsicum annuum HOM05D004852 ORTHO05D006128 4.4e-15 87.8 119 41.2
Migut.N01158 Erythranthe guttata HOM05D004852 ORTHO05D006128 4.4e-15 87.8 121 39.7
PSO541G3304 Papaver somniferum HOM05D004852 ORTHO05D006128 4.4e-15 87.8 123 39.0
arahy.Tifrunner.gnm1.ann1.F6JX6R Arachis hypogaea HOM05D004852 ORTHO05D006128 5.7e-15 87.4 116 39.7
BcaNung06822 Brassica carinata HOM05D004852 ORTHO05D006128 5.7e-15 87.4 118 39.0
C07p27720 Brassica napus HOM05D004852 ORTHO05D006128 5.7e-15 87.4 118 39.0
CANSAT25G3392 Cannabis sativa HOM05D004852 ORTHO05D006128 5.7e-15 87.4 120 41.7
Lalb_Chr09g0319581 Lupinus albus HOM05D004852 ORTHO05D006128 5.7e-15 87.4 121 39.7
SGA_v2.0_scaffold106G30732 Striga asiatica HOM05D004852 ORTHO05D006128 5.7e-15 87.4 121 38.8
BolC7t43304H Brassica oleracea HOM05D004852 ORTHO05D006128 9.7e-15 86.7 118 38.1
Ca_24346_v3 Cicer arietinum L. HOM05D004852 ORTHO05D006128 9.7e-15 86.7 121 38.8
Cc02_g19340 Coffea canephora HOM05D004852 ORTHO05D006128 9.7e-15 86.7 120 38.3
Manes.07G069666 Manihot esculenta HOM05D004852 ORTHO05D006128 9.7e-15 86.7 121 41.3
Rhsim05G0088800 Rhododendron simsii HOM05D004852 ORTHO05D006128 9.7e-15 86.7 123 37.4
Sopen01g049730 Solanum pennellii HOM05D004852 ORTHO05D006128 9.7e-15 86.7 121 39.7
TWI79G0830 Tripterygium wilfordii HOM05D004852 ORTHO05D006128 9.7e-15 86.7 121 38.0
Aa31LG9G8420 Aethionema arabicum HOM05D004852 ORTHO05D006128 1.3e-14 86.3 121 38.0
Thhalv10000766m.g Eutrema salsugineum HOM05D004852 ORTHO05D006128 1.3e-14 86.3 121 38.0
FvH4_2g04972 Fragaria vesca HOM05D004852 ORTHO05D006128 1.3e-14 86.3 117 38.5
FAN15G1156 Fragaria x ananassa HOM05D004852 ORTHO05D006128 1.3e-14 86.3 117 38.5
Gohir.A13G044100 Gossypium hirsutum HOM05D004852 ORTHO05D006128 1.3e-14 86.3 120 36.7
AT5G44750 Arabidopsis thaliana HOM05D004852 ORTHO05D006128 1.7e-14 85.9 121 38.0
COL.COLO4_32578 Corchorus olitorius HOM05D004852 ORTHO05D006128 1.7e-14 85.9 120 37.5
THA.LOC104812918 Tarenaya hassleriana HOM05D004852 ORTHO05D006128 1.7e-14 85.9 121 40.5
CiPaw.05G012900 Carya illinoinensis HOM05D004852 ORTHO05D006128 2.2e-14 85.5 121 38.8
Lj5A215G62 Lonicera japonica HOM05D004852 ORTHO05D006128 2.2e-14 85.5 121 39.7
Medtr5g004960 Medicago truncatula HOM05D004852 ORTHO05D006128 2.2e-14 85.5 115 38.3
Phvul.002G053200 Phaseolus vulgaris HOM05D004852 ORTHO05D006128 2.2e-14 85.5 121 38.8
Psat4g228520 Pisum sativum HOM05D004852 ORTHO05D006128 2.2e-14 85.5 121 38.0
Thecc.02G110100 Theobroma cacao HOM05D004852 ORTHO05D006128 2.2e-14 85.5 120 37.5
EL10Ac9g22261 Beta vulgaris HOM05D004852 ORTHO05D006128 2.8e-14 85.1 121 35.5
AUR62010324 Chenopodium quinoa HOM05D004852 ORTHO05D006128 2.8e-14 85.1 111 39.6
Ciclev10027730m.g Citrus clementina HOM05D004852 ORTHO05D006128 2.8e-14 85.1 121 38.0
Duzib205G0175 Durio zibethinus HOM05D004852 ORTHO05D006128 2.8e-14 85.1 120 38.3
Mapoly0216s0004 Marchantia polymorpha HOM05D004852 ORTHO05D006128 2.8e-14 85.1 105 38.1
QL11p033063 Quercus lobata HOM05D004852 ORTHO05D006128 2.8e-14 85.1 153 35.9
BcaNung07102 Brassica carinata HOM05D004852 ORTHO05D006128 3.7e-14 84.7 138 37.0
Dinv42201 Davidia involucrata HOM05D004852 ORTHO05D006128 3.7e-14 84.7 121 37.2
Eucgr.I01096 Eucalyptus grandis HOM05D004852 ORTHO05D006128 3.7e-14 84.7 121 38.0
Lj1g0003104 Lotus japonicus HOM05D004852 ORTHO05D006128 3.7e-14 84.7 117 38.5
RcHm_v2.0_Chr6g0254741 Rosa chinensis HOM05D004852 ORTHO05D006128 3.7e-14 84.7 117 37.6
Cpa.g.sc106.106 Carica papaya HOM05D004852 ORTHO05D006128 4.8e-14 84.3 121 35.5
Carub.0008s0351 Capsella rubella HOM05D004852 ORTHO05D006128 6.3e-14 84.0 121 37.2
MD10G1098400 Malus domestica HOM05D004852 ORTHO05D006128 6.3e-14 84.0 121 36.4
GSVIVG01037905001 Vitis vinifera HOM05D004852 ORTHO05D006128 6.3e-14 84.0 121 37.2
AL8G14780 Arabidopsis lyrata HOM05D004852 ORTHO05D006128 8.2e-14 83.6 121 36.4
Hma1.2p1_2341F.1_g320320 Hydrangea macrophylla HOM05D004852 ORTHO05D006128 8.2e-14 83.6 154 32.5
Hma1.2p1_2341F.1_g320330 Hydrangea macrophylla HOM05D004852 ORTHO05D006128 8.2e-14 83.6 154 32.5
PRCOL_00001737 Prasinoderma coloniale HOM05D004852 ORTHO05D006128 8.2e-14 83.6 271 29.5
Sabra09G0072700 Salix brachista HOM05D004852 ORTHO05D006128 8.2e-14 83.6 120 37.5
Solyc01g107510.3 Solanum lycopersicum HOM05D004852 ORTHO05D006128 8.2e-14 83.6 119 39.5
MELO3C005497.2 Cucumis melo HOM05D004852 ORTHO05D006128 1.4e-13 82.8 121 37.2
CsaV3_7G008100 Cucumis sativus L. HOM05D004852 ORTHO05D006128 1.4e-13 82.8 121 37.2
PGR142G1976 Punica granatum HOM05D004852 ORTHO05D006128 1.4e-13 82.8 120 38.3
Prupe.8G136700 Prunus persica HOM05D004852 ORTHO05D006128 1.8e-13 82.4 121 36.4
SEGI_21122 Sequoiadendron giganteum HOM05D004852 ORTHO05D006128 1.8e-13 82.4 99 38.4
AagrBONN_evm.TU.Sc2ySwM_228.1916 Anthoceros agrestis HOM05D004852 ORTHO05D006128 2.4e-13 82.0 96 41.7
Glyma.01G243900 Glycine max HOM05D004852 ORTHO05D006128 2.4e-13 82.0 147 34.7
HPP92_017010 Vanilla planifolia HOM05D004852 ORTHO05D006128 2.4e-13 82.0 105 39.0
Sc18g0005570 Simmondsia chinensis HOM05D004852 ORTHO05D006128 3.1e-13 81.6 121 38.8
ATR0205G027 Amborella trichopoda HOM05D004852 ORTHO05D006128 4.1e-13 81.3 120 35.0
HPP92_016994 Vanilla planifolia HOM05D004852 ORTHO05D006128 5.3e-13 80.9 92 42.4
Potri.009G094400 Populus trichocarpa HOM05D004852 ORTHO05D006128 7.0e-13 80.5 114 37.7
Sed0001586 Sechium edule HOM05D004852 ORTHO05D006128 9.1e-13 80.1 121 36.4
Pp3c22_4740 Physcomitrium patens HOM05D004852 ORTHO05D006128 2.6e-12 78.6 90 38.9
MBI16_g23720_MAGBIO Magnolia biondii HOM05D004852 ORTHO05D006128 7.7e-12 77.0 107 38.3
Peaxi162Scf00016g02441 Petunia axillaris HOM05D004852 ORTHO05D006128 2.5e-10 72.0 103 39.8
Lsat_1_v5_gn_7_85781 Lactuca sativa HOM05D004852 ORTHO05D006128 4.2e-10 71.2 84 44.0
arahy.Tifrunner.gnm1.ann1.9X93LG Arachis hypogaea HOM05D004852 ORTHO05D006128 9.4e-10 70.1 79 41.8
ClCG02G006490 Citrullus lanatus HOM05D004852 ORTHO05D006128 1.0e-08 66.6 115 32.2
Ah.01g018340 Amaranthus hybridus HOM05D004852 ORTHO05D006128 4.0e-08 64.7 72 41.7
Cfa025442 Carpinus fangiana HOM05D004852 ORTHO05D006128 8.8e-08 63.5 108 31.5
CDE01G0038 Ceratophyllum demersum HOM05D004852 ORTHO05D006128 5.7e-07 60.8 113 31.9
CBR_g29912 Chara braunii HOM05D004852 ORTHO05D006128 1.3e-06 59.7 92 37.0
MD05G1091100 Malus domestica HOM05D004852 ORTHO05D006128 8.3e-06 57.0 59 45.8


User provided reference genes

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