Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 0.0e+00 1220.7 633 100.0
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 5.4e-69 266.5 660 30.9
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 1.3e-62 245.4 582 30.6
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 5.9e-60 236.5 585 31.8
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 1.0e-59 235.7 636 31.0
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 1.7e-59 235.0 610 30.8
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 2.5e-58 231.1 614 30.8
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 3.3e-58 230.7 610 30.5
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 5.6e-58 229.9 610 30.8
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 2.1e-57 228.0 609 30.9
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 2.1e-57 228.0 611 30.4
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 4.7e-57 226.9 635 30.1
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 6.1e-57 226.5 589 30.6
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 6.1e-57 226.5 585 29.6
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 8.0e-57 226.1 583 31.4
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 8.0e-57 226.1 588 31.0
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.0e-56 225.7 632 29.7
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 1.0e-56 225.7 587 30.5
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.8e-56 224.9 594 31.1
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 2.3e-56 224.6 585 30.9
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 5.2e-56 223.4 584 28.9
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 2.6e-55 221.1 610 29.3
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 4.4e-55 220.3 667 30.7
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 5.8e-55 219.9 587 30.3
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 5.8e-55 219.9 589 30.1
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 9.8e-55 219.2 586 29.2
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 1.3e-54 218.8 595 29.2
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 2.2e-54 218.0 619 29.7
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 2.9e-54 217.6 587 31.2
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 3.7e-54 217.2 591 30.3
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 4.9e-54 216.9 588 29.8
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 4.9e-54 216.9 601 30.4
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 8.3e-54 216.1 638 28.8
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 1.1e-53 215.7 619 29.4
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 1.1e-53 215.7 585 29.9
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 1.4e-53 215.3 581 29.9
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 5.4e-53 213.4 585 29.9
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 7.0e-53 213.0 602 29.4
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 1.6e-52 211.8 634 30.0
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 1.6e-52 211.8 585 30.1
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 2.7e-52 211.1 648 29.5
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 2.7e-52 211.1 591 30.6
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 3.5e-52 210.7 582 28.9
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 3.5e-52 210.7 589 30.4
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 4.6e-52 210.3 591 28.8
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 7.8e-52 209.5 598 28.3
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 1.0e-51 209.1 619 29.4
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 1.0e-51 209.1 592 28.7
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 1.0e-51 209.1 617 29.2
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 1.3e-51 208.8 579 30.4
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 1.3e-51 208.8 591 29.3
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 1.7e-51 208.4 636 29.9
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 3.0e-51 207.6 617 29.0
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 3.9e-51 207.2 589 29.4
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 5.0e-51 206.8 620 28.9
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 5.0e-51 206.8 613 29.9
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 5.0e-51 206.8 624 28.5
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 6.6e-51 206.5 593 28.5
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 6.6e-51 206.5 590 30.8
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 1.1e-50 205.7 593 28.5
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 1.1e-50 205.7 585 29.9
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 1.5e-50 205.3 585 29.7
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 3.3e-50 204.1 596 29.5
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 7.3e-50 203.0 552 29.5
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 9.5e-50 202.6 597 28.6
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 9.5e-50 202.6 596 29.2
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 2.1e-49 201.4 586 28.8
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 4.7e-49 200.3 624 28.2
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 6.2e-49 199.9 624 28.0
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 6.2e-49 199.9 607 28.0
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 8.0e-49 199.5 592 28.2
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 1.1e-48 199.1 621 27.4
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 1.4e-48 198.7 592 27.9
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 1.4e-48 198.7 592 28.0
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 1.8e-48 198.4 611 28.8
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 2.3e-48 198.0 593 27.5
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 4.0e-48 197.2 587 29.3
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 5.2e-48 196.8 619 27.9
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 5.2e-48 196.8 593 28.0
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 6.8e-48 196.4 622 28.0
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 2.0e-47 194.9 593 29.8
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 2.6e-47 194.5 614 27.5
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 4.4e-47 193.7 593 27.0
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 5.8e-47 193.4 549 29.0
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 7.5e-47 193.0 606 27.7
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 1.3e-46 192.2 617 28.0
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 2.9e-46 191.0 593 27.5
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 3.7e-46 190.7 605 27.8
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 4.9e-46 190.3 592 28.4
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 6.4e-46 189.9 394 33.8
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 1.1e-45 189.1 598 27.9
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 1.1e-45 189.1 637 29.4
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 1.4e-45 188.7 595 26.4
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 1.9e-45 188.3 616 27.6
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 7.0e-45 186.4 606 28.2
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 2.7e-44 184.5 535 29.9
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 2.7e-44 184.5 610 28.5
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 3.5e-44 184.1 591 27.7
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 7.8e-44 183.0 531 29.8
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 1.0e-43 182.6 621 26.1
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 7.3e-42 176.4 412 30.3
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 2.1e-41 174.9 580 28.3
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 1.4e-37 162.2 629 27.5
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 5.4e-37 160.2 607 26.5
PRCOL_00005763 Prasinoderma coloniale HOM05D005942 ORTHO05D007209 1.6e-33 148.7 553 30.6
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 6.2e-33 146.7 297 32.0
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 1.8e-32 145.2 297 32.0
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 3.9e-27 127.5 613 23.3
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 6.6e-27 126.7 502 27.3
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 8.7e-27 126.3 710 23.2
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 1.1e-21 109.4 259 30.9
HPP92_016646 Vanilla planifolia HOM05D005942 ORTHO05D007209 9.3e-21 106.3 336 31.0
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 4.8e-17 94.0 163 31.9
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 3.3e-10 71.2 125 32.0
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 1.3e-09 69.3 484 22.9
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 8.1e-09 66.6 170 27.6
CBR_g19531 Chara braunii HOM05D005942 ORTHO05D007209 2.4e-08 65.1 155 26.5
SEGI_28404 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 7.6e-07 60.1 73 42.5


User provided reference genes

Program Settings