Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 8.6e-165 583.6 292 100.0
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 3.9e-32 142.9 246 36.6
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 1.3e-30 137.9 254 35.4
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 2.8e-30 136.7 283 33.9
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 3.7e-30 136.3 258 35.7
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 4.8e-30 136.0 280 35.4
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 4.8e-30 136.0 241 35.7
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 8.1e-30 135.2 269 34.6
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 8.1e-30 135.2 258 35.7
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 1.4e-29 134.4 281 34.9
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 4.0e-29 132.9 256 35.5
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 4.0e-29 132.9 256 34.4
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 4.0e-29 132.9 254 34.3
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 5.3e-29 132.5 278 33.1
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 6.9e-29 132.1 254 35.4
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 9.0e-29 131.7 245 35.9
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 9.0e-29 131.7 247 37.2
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 9.0e-29 131.7 276 34.8
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 9.0e-29 131.7 247 35.2
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 1.2e-28 131.3 256 34.4
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 1.2e-28 131.3 250 36.0
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 1.2e-28 131.3 255 34.9
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 1.5e-28 131.0 278 35.6
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 1.5e-28 131.0 278 35.6
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 2.0e-28 130.6 244 34.0
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 2.0e-28 130.6 254 33.5
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 2.0e-28 130.6 262 34.0
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 2.6e-28 130.2 245 35.5
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 2.6e-28 130.2 262 34.4
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.6e-28 130.2 275 34.5
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 2.6e-28 130.2 250 35.6
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 3.4e-28 129.8 246 36.2
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 3.4e-28 129.8 241 34.9
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 4.5e-28 129.4 249 36.5
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 4.5e-28 129.4 278 35.3
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 1.3e-27 127.9 257 35.0
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 1.3e-27 127.9 254 33.5
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 1.3e-27 127.9 278 31.7
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 1.7e-27 127.5 246 35.4
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 2.2e-27 127.1 244 34.8
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 2.9e-27 126.7 246 33.7
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 2.9e-27 126.7 242 34.3
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 4.9e-27 125.9 244 36.1
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 4.9e-27 125.9 245 35.9
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 4.9e-27 125.9 254 34.3
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 6.4e-27 125.6 249 36.1
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 8.4e-27 125.2 278 31.7
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 1.1e-26 124.8 257 34.6
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 1.4e-26 124.4 279 33.3
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 1.4e-26 124.4 246 35.4
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 1.9e-26 124.0 257 34.2
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 2.4e-26 123.6 241 36.5
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 3.2e-26 123.2 244 35.2
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 4.2e-26 122.9 256 34.4
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 5.5e-26 122.5 248 34.7
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 5.5e-26 122.5 248 34.7
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 5.5e-26 122.5 251 33.9
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 7.1e-26 122.1 248 34.7
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 7.1e-26 122.1 254 32.7
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 9.3e-26 121.7 245 34.3
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 9.3e-26 121.7 250 34.4
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 9.3e-26 121.7 247 34.8
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 1.2e-25 121.3 316 32.0
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 1.6e-25 120.9 249 33.7
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 1.6e-25 120.9 278 31.7
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 1.6e-25 120.9 266 33.1
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 2.1e-25 120.6 249 33.7
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 2.1e-25 120.6 253 34.0
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 2.1e-25 120.6 247 34.4
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 2.7e-25 120.2 247 34.4
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 3.5e-25 119.8 246 33.7
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 4.6e-25 119.4 249 34.5
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 4.6e-25 119.4 246 33.7
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 4.6e-25 119.4 247 34.4
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 4.6e-25 119.4 246 34.1
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 1.0e-24 118.2 246 33.7
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.8e-24 117.5 265 34.0
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 3.0e-24 116.7 245 33.9
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 3.0e-24 116.7 246 33.3
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 3.0e-24 116.7 244 32.8
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 6.7e-24 115.5 246 34.6
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 6.7e-24 115.5 246 33.3
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 8.7e-24 115.2 260 32.7
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 1.5e-23 114.4 291 31.3
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 1.5e-23 114.4 246 32.9
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 1.9e-23 114.0 246 32.9
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 2.5e-23 113.6 192 38.5
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.3e-23 113.2 270 30.7
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 2.1e-22 110.5 191 35.6
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.7e-22 109.8 260 30.4
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 3.4e-20 103.2 219 31.5
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 4.9e-19 99.4 221 30.3
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 4.9e-19 99.4 164 37.2
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 1.4e-18 97.8 217 30.9
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 2.5e-18 97.1 224 31.2
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 3.2e-18 96.7 254 29.9
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 1.3e-16 91.3 206 32.5
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 3.0e-16 90.1 208 32.7
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 3.0e-16 90.1 206 33.0
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 5.1e-16 89.4 163 36.8
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 2.1e-14 84.0 241 28.6
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 8.2e-14 82.0 217 30.4
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 6.9e-13 79.0 219 31.1
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 9.0e-13 78.6 100 44.0
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 1.5e-12 77.8 111 37.8
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 3.4e-12 76.6 169 33.1
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 2.2e-11 73.9 144 33.3
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 5.0e-11 72.8 193 31.1
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 1.1e-10 71.6 170 31.8
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.9e-10 70.9 218 25.7
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.9e-10 70.9 199 29.6
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 5.5e-10 69.3 313 25.6
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 4.6e-09 66.2 178 28.7
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 7.9e-09 65.5 108 37.0
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 5.1e-08 62.8 94 37.2
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 1.1e-07 61.6 93 39.8
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 1.5e-07 61.2 140 32.1
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 5.7e-07 59.3 143 29.4
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 6.3e-06 55.8 144 27.8


User provided reference genes

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