Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g02179_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 6.0e-119 431.0 245 100.0
MBI09_g12242_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 5.0e-89 331.6 373 56.3
MBI13_g09079_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 1.2e-87 327.0 374 58.8
MBI17_g29157_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 6.5e-81 304.7 305 57.7
MBI18_g46709_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 8.8e-78 294.3 315 54.3
MBI12_g01337_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 1.9e-72 276.6 175 92.0
MBI08_g23718_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 1.7e-57 226.9 174 69.0
MBI14_g46521_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 1.7e-52 210.3 174 71.8
MBI05_g03760_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 3.0e-41 172.9 310 39.7
MBI12_g08714_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 4.0e-38 162.5 202 50.0
MBI05_g23417_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 3.1e-30 136.3 67 98.5
MBI05_g23416_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 1.6e-26 124.0 67 86.6
Dinv22035 Davidia involucrata HOM05D000228 ORTHO05D004880 4.6e-26 122.5 324 26.5
MBI12_g01338_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 1.7e-25 120.6 63 92.1
MBI14_g46520_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 1.6e-23 114.0 60 91.7
Nitab4.5_0000307g0250 Nicotiana tabacum HOM05D000228 ORTHO05D004880 2.1e-23 113.6 332 24.4
TAR626G0081 Trochodendron aralioides HOM05D000228 ORTHO05D004880 1.8e-22 110.5 336 26.5
Nitab4.5_0004955g0050 Nicotiana tabacum HOM05D000228 ORTHO05D004880 1.9e-19 100.5 139 37.4
PSO782G2240 Papaver somniferum HOM05D000228 ORTHO05D004880 2.4e-19 100.1 324 25.6
PSO063G0693 Papaver somniferum HOM05D000228 ORTHO05D004880 5.4e-19 99.0 324 25.6
MBI03_g41360_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 1.6e-18 97.4 56 85.7
MBI06_g16034_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 1.6e-18 97.4 56 85.7
MBI09_g25176_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 1.6e-18 97.4 56 85.7
MBI14_g07751_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 1.6e-18 97.4 56 85.7
MBI02_g40253_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 6.0e-18 95.5 56 83.9
MBI04_g46058_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 6.0e-18 95.5 56 83.9
MBI04_g28823_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 7.8e-18 95.1 56 83.9
Actinidia21520 Actinidia chinensis HOM05D000228 ORTHO05D004880 1.0e-17 94.7 331 24.2
CiPaw.13G013500 Carya illinoinensis HOM05D000228 ORTHO05D004880 1.1e-16 91.3 335 23.0
Rhsim01G0124000 Rhododendron simsii HOM05D000228 ORTHO05D004880 4.3e-16 89.4 340 22.4
Solyc01g096390.4 Solanum lycopersicum HOM05D000228 ORTHO05D004880 7.3e-16 88.6 333 23.1
Sopen01g040120 Solanum pennellii HOM05D000228 ORTHO05D004880 1.2e-15 87.8 333 22.8
Aqoxy7G04198 Aquilegia oxysepala HOM05D000228 ORTHO05D004880 3.6e-15 86.3 335 25.7
GSVIVG01013491001 Vitis vinifera HOM05D000228 ORTHO05D004880 3.6e-15 86.3 321 23.7
Actinidia02263 Actinidia chinensis HOM05D000228 ORTHO05D004880 4.7e-15 85.9 272 25.4
Hma1.2p1_1202F.1_g266790 Hydrangea macrophylla HOM05D000228 ORTHO05D004880 4.7e-15 85.9 68 54.4
Potri.001G027232 Populus trichocarpa HOM05D000228 ORTHO05D004880 6.2e-15 85.5 328 22.9
Sabra03G0146600 Salix brachista HOM05D000228 ORTHO05D004880 6.2e-15 85.5 328 22.9
CSS0032728 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D004880 8.1e-15 85.1 62 58.1
Potri.003G196900 Populus trichocarpa HOM05D000228 ORTHO05D004880 8.1e-15 85.1 328 22.9
vmacro12694 Vaccinium macrocarpon HOM05D000228 ORTHO05D004880 4.0e-14 82.8 319 23.5
Lalb_Chr01g0007761 Lupinus albus HOM05D000228 ORTHO05D004880 5.2e-14 82.4 327 22.6
Peaxi162Scf00767g00417 Petunia axillaris HOM05D000228 ORTHO05D004880 5.2e-14 82.4 333 21.9
CAN.G1045.38 Capsicum annuum HOM05D000228 ORTHO05D004880 9.0e-14 81.6 333 22.5
Aqoxy6G01013 Aquilegia oxysepala HOM05D000228 ORTHO05D004880 1.2e-13 81.3 318 25.5
MBI10_g44185_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 1.5e-13 80.9 43 90.7
Atru.chr12.1341 Acer truncatum HOM05D000228 ORTHO05D004880 2.6e-13 80.1 329 22.2
Oeu038179.1 Olea europaea HOM05D000228 ORTHO05D012380 5.8e-13 79.0 136 34.6
SalBow5G3376 Salvia bowleyana HOM05D000228 ORTHO05D004880 7.6e-13 78.6 68 45.6
SalBow5G5050 Salvia bowleyana HOM05D000228 ORTHO05D004880 9.9e-13 78.2 68 44.1
Lj3g0006268 Lotus japonicus HOM05D000228 ORTHO05D004880 1.3e-12 77.8 321 20.9
Cc02_g30260 Coffea canephora HOM05D000228 ORTHO05D004880 1.7e-12 77.4 68 47.1
Lj7A585G29 Lonicera japonica HOM05D000228 ORTHO05D004880 1.7e-12 77.4 136 37.5
RcHm_v2.0_Chr1g0324091 Rosa chinensis HOM05D000228 ORTHO05D004880 1.7e-12 77.4 67 47.8
Cpa.g.sc271.3 Carica papaya HOM05D000228 ORTHO05D004880 2.2e-12 77.0 148 31.8
Eucgr.J01182 Eucalyptus grandis HOM05D000228 ORTHO05D004880 2.2e-12 77.0 68 41.2
FAN06G4504 Fragaria x ananassa HOM05D000228 ORTHO05D004880 2.2e-12 77.0 314 22.3
MD07G1039700 Malus domestica HOM05D000228 ORTHO05D004880 2.2e-12 77.0 66 48.5
Ah.10g030570 Amaranthus hybridus HOM05D000228 ORTHO05D004880 2.9e-12 76.6 68 48.5
EL10Ac2g02803 Beta vulgaris HOM05D000228 ORTHO05D004880 2.9e-12 76.6 68 48.5
Ca_23957_v3 Cicer arietinum L. HOM05D000228 ORTHO05D004880 2.9e-12 76.6 68 44.1
Ca_30885_v3 Cicer arietinum L. HOM05D005112 ORTHO05D006681 2.9e-12 76.6 68 44.1
Lj3g0014961 Lotus japonicus HOM05D000228 ORTHO05D004880 2.9e-12 76.6 68 44.1
Prupe.2G035500 Prunus persica HOM05D000228 ORTHO05D004880 2.9e-12 76.6 321 22.7
CDE02G4035 Ceratophyllum demersum HOM05D000228 ORTHO05D004880 3.8e-12 76.3 125 44.0
FvH4_7g03040 Fragaria vesca HOM05D000228 ORTHO05D004880 3.8e-12 76.3 314 22.3
FAN01G1291 Fragaria x ananassa HOM05D000228 ORTHO05D004880 3.8e-12 76.3 314 22.3
FAN03G2523 Fragaria x ananassa HOM05D000228 ORTHO05D004880 3.8e-12 76.3 314 22.3
FAN10G2682 Fragaria x ananassa HOM05D000228 ORTHO05D004880 3.8e-12 76.3 314 22.3
Zm00001eb207920 Zea mays HOM05D000228 ORTHO05D004880 3.8e-12 76.3 133 36.8
Manes.04G159600 Manihot esculenta HOM05D000228 ORTHO05D004880 4.9e-12 75.9 94 38.3
Nn6g31494 Nelumbo nucifera HOM05D000228 ORTHO05D004880 4.9e-12 75.9 327 24.2
Ah.10g030560 Amaranthus hybridus HOM05D000228 ORTHO05D004880 6.4e-12 75.5 68 47.1
Thecc.10G157200 Theobroma cacao HOM05D000228 ORTHO05D004880 8.4e-12 75.1 62 50.0
TWI38G1715 Tripterygium wilfordii HOM05D000228 ORTHO05D004880 8.4e-12 75.1 68 41.2
VMungo1127G1028 Vigna mungo HOM05D000228 ORTHO05D004880 1.1e-11 74.7 66 43.9
DCAR_022342 Daucus carota HOM05D000228 ORTHO05D004880 1.4e-11 74.3 64 46.9
Glyma.15G235900 Glycine max HOM05D000228 ORTHO05D004880 1.4e-11 74.3 336 20.8
Gohir.A06G175400 Gossypium hirsutum HOM05D000228 ORTHO05D004880 1.4e-11 74.3 62 50.0
Gorai.010G216600 Gossypium raimondii HOM05D000228 ORTHO05D004880 1.4e-11 74.3 62 50.0
Medtr8g038990 Medicago truncatula HOM05D000228 ORTHO05D004880 1.4e-11 74.3 68 42.6
Migut.B01227 Erythranthe guttata HOM05D000228 ORTHO05D004880 2.4e-11 73.6 68 36.8
HanXRQChr15g0481481 Helianthus annuus HOM05D000228 ORTHO05D004880 2.4e-11 73.6 93 37.6
Ciclev10004129m.g Citrus clementina HOM05D000228 ORTHO05D004880 3.2e-11 73.2 62 50.0
COL.COLO4_20753 Corchorus olitorius HOM05D000228 ORTHO05D004880 3.2e-11 73.2 60 51.7
Haze_03043 Corylus avellana HOM05D000228 ORTHO05D004880 3.2e-11 73.2 105 36.2
Phvul.011G206900 Phaseolus vulgaris HOM05D000228 ORTHO05D004880 3.2e-11 73.2 66 43.9
TWI15G0020 Tripterygium wilfordii HOM05D000228 ORTHO05D004880 3.2e-11 73.2 96 34.4
PGR044G0122 Punica granatum HOM05D000228 ORTHO05D004880 4.2e-11 72.8 93 36.6
Hund27778 Selenicereus undatus HOM05D000228 ORTHO05D004880 4.2e-11 72.8 68 47.1
Hund27781 Selenicereus undatus HOM05D000228 ORTHO05D004880 4.2e-11 72.8 68 47.1
MBI19_g26100_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 5.4e-11 72.4 52 75.0
Sp4g22340 Schrenkiella parvula HOM05D000228 ORTHO05D004880 5.4e-11 72.4 93 37.6
MELO3C005153.2 Cucumis melo HOM05D000228 ORTHO05D004880 7.1e-11 72.0 134 35.1
Gohir.D06G185200 Gossypium hirsutum HOM05D000228 ORTHO05D004880 7.1e-11 72.0 60 50.0
MD02G1287600 Malus domestica HOM05D000228 ORTHO05D004880 7.1e-11 72.0 315 22.2
Sc11g0006440 Simmondsia chinensis HOM05D000228 ORTHO05D004880 7.1e-11 72.0 69 46.4
ECA236G0597 Erigeron canadensis HOM05D000228 ORTHO05D004880 9.3e-11 71.6 92 37.0
Glyma.13G196900 Glycine max HOM05D000228 ORTHO05D004880 1.2e-10 71.2 314 21.3
BcaB02g09059 Brassica carinata HOM05D000228 ORTHO05D004880 1.6e-10 70.9 73 41.1
ClCG01G007520 Citrullus lanatus HOM05D000228 ORTHO05D004880 1.6e-10 70.9 134 33.6
arahy.Tifrunner.gnm1.ann1.K566NY Arachis hypogaea HOM05D000228 ORTHO05D004880 2.1e-10 70.5 129 34.9
CsaV3_5G024490 Cucumis sativus L. HOM05D000228 ORTHO05D004880 2.1e-10 70.5 134 33.6
MBI01_g27615_MAGBIO Magnolia biondii HOM05D004381 ORTHO05D005200 2.1e-10 70.5 57 68.4
Carub.0004s2219 Capsella rubella HOM05D000228 ORTHO05D004880 2.7e-10 70.1 93 37.6
MBI08_g12650_MAGBIO Magnolia biondii HOM05D000853 ORTHO05D011152 2.7e-10 70.1 38 92.1
Lalb_Chr03g0032731 Lupinus albus HOM05D000228 ORTHO05D004880 3.5e-10 69.7 66 43.9
Duzib114G0608 Durio zibethinus HOM05D000228 ORTHO05D004880 4.6e-10 69.3 62 46.8
Lalb_Chr03g0032721 Lupinus albus HOM05D000228 ORTHO05D012380 4.6e-10 69.3 132 33.3
AL4G37670 Arabidopsis lyrata HOM05D000228 ORTHO05D004880 6.0e-10 68.9 93 37.6
CANSAT56G3974 Cannabis sativa HOM05D000228 ORTHO05D004880 7.8e-10 68.6 69 42.0
MBI13_g25523_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D012380 2.3e-09 67.0 38 86.8
Prupe.2G035700 Prunus persica HOM05D000228 ORTHO05D004880 2.3e-09 67.0 130 34.6
Sed0021971 Sechium edule HOM05D000228 ORTHO05D004880 3.0e-09 66.6 144 34.0
TPR.G25078 Trifolium pratense HOM05D000228 ORTHO05D004880 3.0e-09 66.6 66 40.9
THA.LOC104809820 Tarenaya hassleriana HOM05D000228 ORTHO05D004880 5.1e-09 65.9 68 42.6
unitig_0.g1386 Utricularia gibba HOM05D000228 ORTHO05D004880 5.1e-09 65.9 68 36.8
BcaB01g03594 Brassica carinata HOM05D000228 ORTHO05D004880 6.6e-09 65.5 93 34.4
A03p22490 Brassica napus HOM05D000228 ORTHO05D004880 8.7e-09 65.1 93 34.4
BraA03t11476Z Brassica rapa HOM05D000228 ORTHO05D004880 8.7e-09 65.1 93 34.4
AT2G40030 Arabidopsis thaliana HOM05D000228 ORTHO05D004880 1.5e-08 64.3 93 34.4
BcaC01g05442 Brassica carinata HOM05D000228 ORTHO05D004880 1.5e-08 64.3 93 34.4
C03p26640 Brassica napus HOM05D000228 ORTHO05D004880 1.5e-08 64.3 93 34.4
BolC3t15049H Brassica oleracea HOM05D000228 ORTHO05D004880 1.5e-08 64.3 93 34.4
Thhalv10016128m.g Eutrema salsugineum HOM05D000228 ORTHO05D004880 1.5e-08 64.3 96 34.4
HanXRQChr01g0022531 Helianthus annuus HOM05D000228 ORTHO05D004880 1.5e-08 64.3 61 42.6
Lsat_1_v5_gn_7_31901 Lactuca sativa HOM05D006097 ORTHO05D004880 1.9e-08 63.9 110 37.3
Aa31LG5G19570 Aethionema arabicum HOM05D000228 ORTHO05D004880 3.3e-08 63.2 96 35.4
Sed0005526 Sechium edule HOM05D000228 ORTHO05D004880 4.3e-08 62.8 126 36.5
AUR62026863 Chenopodium quinoa HOM05D000228 ORTHO05D004880 7.3e-08 62.0 80 37.5
AUR62032652 Chenopodium quinoa HOM05D000228 ORTHO05D004880 7.3e-08 62.0 80 37.5
Os01g0965000 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D004880 7.3e-08 62.0 67 40.3
SGA_v2.0_scaffold124G33613 Striga asiatica HOM05D000228 ORTHO05D004880 9.6e-08 61.6 76 31.6
CARHR134990 Cardamine hirsuta HOM05D000228 ORTHO05D004880 1.6e-07 60.8 93 33.3
MBI16_g45672_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D002228 2.1e-07 60.5 34 85.3
TPR.G27822 Trifolium pratense HOM05D000228 ORTHO05D004880 2.8e-07 60.1 142 28.2
Psat4g144400 Pisum sativum HOM05D000228 ORTHO05D004880 8.1e-07 58.5 130 32.3
RhsimUnG0058700 Rhododendron simsii HOM05D000228 ORTHO05D004880 1.8e-06 57.4 94 37.2


User provided reference genes

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