Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI07_g23017_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004754 2.0e-78 295.8 161 100.0
MBI18_g27146_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 1.3e-56 223.4 191 69.6
MBI12_g17629_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 8.4e-53 210.7 149 81.9
MBI10_g08630_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 7.1e-44 181.0 127 82.7
Aqoxy1G01362 Aquilegia oxysepala HOM05D003499 ORTHO05D004754 1.9e-41 172.9 158 64.6
TAR626G0290 Trochodendron aralioides HOM05D003499 ORTHO05D004754 1.1e-39 167.2 155 63.9
MD10G1218800 Malus domestica HOM05D003499 ORTHO05D004754 2.6e-38 162.5 158 62.0
Manes.16G052800 Manihot esculenta HOM05D003499 ORTHO05D004754 6.5e-37 157.9 155 60.0
Sabra08G0060200 Salix brachista HOM05D003499 ORTHO05D004754 1.1e-36 157.1 155 59.4
MBI16_g34347_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 3.2e-36 155.6 115 76.5
FAN11G2210 Fragaria x ananassa HOM05D003499 ORTHO05D004754 5.5e-36 154.8 155 60.0
Dinv42452 Davidia involucrata HOM05D003499 ORTHO05D004754 7.1e-36 154.5 155 58.1
Duzib213G0086 Durio zibethinus HOM05D003499 ORTHO05D004754 1.2e-35 153.7 155 60.0
FAN25G2460 Fragaria x ananassa HOM05D003499 ORTHO05D004754 1.2e-35 153.7 158 58.2
Potri.008G080900 Populus trichocarpa HOM05D003499 ORTHO05D004754 1.2e-35 153.7 155 58.7
Sabra11G0075400 Salix brachista HOM05D000228 ORTHO05D001122 1.6e-35 153.3 155 57.4
Sabra16G0005400 Salix brachista HOM05D000228 ORTHO05D001122 1.6e-35 153.3 155 57.4
MBI17_g19041_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 2.1e-35 152.9 107 82.2
FvH4_3g13850 Fragaria vesca HOM05D003499 ORTHO05D004754 2.7e-35 152.5 158 58.2
CDE02G3941 Ceratophyllum demersum HOM05D003499 ORTHO05D004754 6.0e-35 151.4 157 56.1
GSVIVG01036698001 Vitis vinifera HOM05D003499 ORTHO05D004754 6.0e-35 151.4 154 57.8
FAN21G2046 Fragaria x ananassa HOM05D003499 ORTHO05D004754 1.0e-34 150.6 158 57.6
Gohir.D01G085300 Gossypium hirsutum HOM05D003499 ORTHO05D004754 1.8e-34 149.8 153 58.8
Sabra16G0132400 Salix brachista HOM05D000228 ORTHO05D001122 1.8e-34 149.8 155 56.8
FAN16G2389 Fragaria x ananassa HOM05D003499 ORTHO05D004754 2.3e-34 149.4 158 57.6
Gohir.A01G100800 Gossypium hirsutum HOM05D003499 ORTHO05D004754 2.3e-34 149.4 154 58.4
Gorai.002G110900 Gossypium raimondii HOM05D003499 ORTHO05D004754 2.3e-34 149.4 154 58.4
Nn7g38420 Nelumbo nucifera HOM05D003499 ORTHO05D004754 3.0e-34 149.1 138 64.5
CANSAT56G3760 Cannabis sativa HOM05D003499 ORTHO05D004754 3.9e-34 148.7 158 57.0
Medtr2g063480 Medicago truncatula HOM05D003499 ORTHO05D004754 5.1e-34 148.3 158 56.3
THA.LOC104813306 Tarenaya hassleriana HOM05D003499 ORTHO05D004754 5.1e-34 148.3 155 58.1
MD05G1240600 Malus domestica HOM05D003499 ORTHO05D004754 6.7e-34 147.9 158 58.9
Psat0s13g0320 Pisum sativum HOM05D003499 ORTHO05D004754 1.9e-33 146.4 158 55.7
MBI03_g24553_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004754 2.5e-33 146.0 107 79.4
PSO541G3284 Papaver somniferum HOM05D003499 ORTHO05D004754 2.5e-33 146.0 156 56.4
Thecc.07G189900 Theobroma cacao HOM05D003499 ORTHO05D004754 3.3e-33 145.6 153 57.5
Lalb_Chr01g0015591 Lupinus albus HOM05D003499 ORTHO05D004754 7.4e-33 144.4 158 57.0
Ciclev10006542m.g Citrus clementina HOM05D003499 ORTHO05D004754 9.7e-33 144.1 158 53.2
TWI38G0606 Tripterygium wilfordii HOM05D003499 ORTHO05D004754 9.7e-33 144.1 154 57.8
ClCG09G022890 Citrullus lanatus HOM05D003499 ORTHO05D004754 1.6e-32 143.3 158 53.8
TPR.G3598 Trifolium pratense HOM05D003499 ORTHO05D004754 1.6e-32 143.3 158 55.1
Hma1.2p1_0151F.1_g066930 Hydrangea macrophylla HOM05D003499 ORTHO05D004754 2.8e-32 142.5 158 52.5
A07p44380 Brassica napus HOM05D003499 ORTHO05D004754 4.8e-32 141.7 158 50.6
RcHm_v2.0_Chr5g0023031 Rosa chinensis HOM05D003499 ORTHO05D004754 4.8e-32 141.7 158 55.1
CsaV3_7G023140 Cucumis sativus L. HOM05D003499 ORTHO05D004754 8.2e-32 141.0 158 52.5
Lalb_Chr25g0284181 Lupinus albus HOM05D003499 ORTHO05D004754 8.2e-32 141.0 158 55.7
Lj3g0016310 Lotus japonicus HOM05D003499 ORTHO05D004754 1.1e-31 140.6 158 53.8
MBI14_g41599_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004754 1.8e-31 139.8 107 73.8
BcaC08g45365 Brassica carinata HOM05D003499 ORTHO05D004754 2.4e-31 139.4 158 51.9
C06p29970 Brassica napus HOM05D003499 ORTHO05D004754 2.4e-31 139.4 158 51.9
BolC6t38157H Brassica oleracea HOM05D003499 ORTHO05D004754 2.4e-31 139.4 158 51.9
Dinv19570 Davidia involucrata HOM05D003499 ORTHO05D004754 2.4e-31 139.4 155 54.2
Rhsim09G0000500 Rhododendron simsii HOM05D003499 ORTHO05D004754 2.4e-31 139.4 155 54.2
C06p53180 Brassica napus HOM05D003499 ORTHO05D004754 3.1e-31 139.0 158 50.0
BolC6t40336H Brassica oleracea HOM05D003499 ORTHO05D004754 3.1e-31 139.0 158 50.0
MELO3C012583.2 Cucumis melo HOM05D003499 ORTHO05D004754 3.1e-31 139.0 158 51.9
Prupe.4G125000 Prunus persica HOM05D003499 ORTHO05D004754 3.1e-31 139.0 158 55.7
Sp5g34360 Schrenkiella parvula HOM05D003499 ORTHO05D004754 3.1e-31 139.0 158 51.9
Actinidia26203 Actinidia chinensis HOM05D003499 ORTHO05D004754 4.1e-31 138.7 155 51.6
Sc05g0008250 Simmondsia chinensis HOM05D003499 ORTHO05D004754 5.3e-31 138.3 155 54.8
A07p27200 Brassica napus HOM05D003499 ORTHO05D004754 6.9e-31 137.9 158 51.9
BraA07t30364Z Brassica rapa HOM05D003499 ORTHO05D004754 6.9e-31 137.9 158 51.9
Sed0001737 Sechium edule HOM05D003499 ORTHO05D004754 9.0e-31 137.5 158 51.9
AT1G79280 Arabidopsis thaliana HOM05D003499 ORTHO05D004754 2.0e-30 136.3 158 50.6
BraA07t31947Z Brassica rapa HOM05D003499 ORTHO05D004754 2.6e-30 136.0 158 49.4
HanXRQChr14g0459251 Helianthus annuus HOM05D003499 ORTHO05D004754 3.4e-30 135.6 154 50.0
Atru.chr1.17 Acer truncatum HOM05D003499 ORTHO05D004754 4.5e-30 135.2 158 53.8
BcaB02g07209 Brassica carinata HOM05D003499 ORTHO05D004754 5.9e-30 134.8 158 50.0
MBI02_g18804_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 5.9e-30 134.8 101 75.2
PSO675G8338 Papaver somniferum HOM05D003499 ORTHO05D004754 5.9e-30 134.8 156 53.2
EL10Ac8g19951 Beta vulgaris HOM05D003499 ORTHO05D004754 7.6e-30 134.4 155 52.3
CARHR072950 Cardamine hirsuta HOM05D003499 ORTHO05D004754 1.0e-29 134.0 158 48.7
Nitab4.5_0002333g0110 Nicotiana tabacum HOM05D003499 ORTHO05D004754 1.0e-29 134.0 153 51.6
VMungo1080G1290 Vigna mungo HOM05D003499 ORTHO05D004754 1.0e-29 134.0 158 51.9
AL2G39880 Arabidopsis lyrata HOM05D003499 ORTHO05D004754 1.3e-29 133.7 158 50.0
Migut.H01651 Erythranthe guttata HOM05D003499 ORTHO05D004754 1.3e-29 133.7 154 51.9
Aa31LG4G1710 Aethionema arabicum HOM05D003499 ORTHO05D004754 1.7e-29 133.3 158 49.4
Thhalv10017995m.g Eutrema salsugineum HOM05D003499 ORTHO05D004754 2.2e-29 132.9 158 48.7
Glyma.15G265300 Glycine max HOM05D003499 ORTHO05D004754 2.9e-29 132.5 158 51.3
Carub.0002s2615 Capsella rubella HOM05D003499 ORTHO05D004754 3.8e-29 132.1 158 48.7
Glyma.08G162300 Glycine max HOM05D003499 ORTHO05D004754 6.5e-29 131.3 158 51.9
Nitab4.5_0005627g0040 Nicotiana tabacum HOM05D003499 ORTHO05D004754 6.5e-29 131.3 153 50.3
SGA_v2.0_scaffold239G43999 Striga asiatica HOM05D003499 ORTHO05D004754 8.5e-29 131.0 155 51.0
MSTRG.14572 Avicennia marina HOM05D003499 ORTHO05D004754 1.1e-28 130.6 154 48.7
Peaxi162Scf00579g00316 Petunia axillaris HOM05D003499 ORTHO05D004754 1.1e-28 130.6 154 50.6
ECA233G1650 Erigeron canadensis HOM05D003499 ORTHO05D004754 1.4e-28 130.2 158 50.6
Ah.09g236940 Amaranthus hybridus HOM05D003499 ORTHO05D004754 1.9e-28 129.8 155 51.0
Hund21305 Selenicereus undatus HOM05D003499 ORTHO05D004754 3.2e-28 129.0 155 51.0
Haze_18466 Corylus avellana HOM05D003499 ORTHO05D004754 4.2e-28 128.6 158 53.8
DCAR_013704 Daucus carota HOM05D003499 ORTHO05D004754 4.2e-28 128.6 158 49.4
MBI10_g16742_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 4.2e-28 128.6 106 70.8
Sopen06g018680 Solanum pennellii HOM05D003499 ORTHO05D004754 4.2e-28 128.6 153 49.7
arahy.Tifrunner.gnm1.ann1.DHQL63 Arachis hypogaea HOM05D003499 ORTHO05D004754 7.2e-28 127.9 158 48.1
ATR1127G224 Amborella trichopoda HOM05D003499 ORTHO05D004754 9.3e-28 127.5 158 50.6
PGSC0003DMG400016328 Solanum tuberosum HOM05D003499 ORTHO05D004754 9.3e-28 127.5 153 49.0
HanXRQChr08g0213121 Helianthus annuus HOM05D003499 ORTHO05D004754 2.1e-27 126.3 154 47.4
Eucgr.F04480 Eucalyptus grandis HOM05D003499 ORTHO05D004754 3.6e-27 125.6 158 49.4
CAN.G374.15 Capsicum annuum HOM05D003499 ORTHO05D004754 4.6e-27 125.2 153 49.0
arahy.Tifrunner.gnm1.ann1.LW990M Arachis hypogaea HOM05D003499 ORTHO05D004754 6.1e-27 124.8 158 48.1
AUR62014655 Chenopodium quinoa HOM05D003499 ORTHO05D004754 7.9e-27 124.4 154 48.1
AUR62012541 Chenopodium quinoa HOM05D003499 ORTHO05D004754 1.8e-26 123.2 154 48.1
Cc00_g09120 Coffea canephora HOM05D003499 ORTHO05D004754 1.8e-26 123.2 158 50.6
CiPaw.15G111600 Carya illinoinensis HOM05D003499 ORTHO05D004754 2.3e-26 122.9 158 50.0
vmacro21306 Vaccinium macrocarpon HOM05D003499 ORTHO05D004754 5.1e-26 121.7 154 50.0
Phvul.005G045700 Phaseolus vulgaris HOM05D003499 ORTHO05D004754 6.7e-26 121.3 158 48.7
Ca_03376_v3 Cicer arietinum L. HOM05D003499 ORTHO05D004754 1.5e-25 120.2 158 48.7
unitig_578.g16338 Utricularia gibba HOM05D003499 ORTHO05D004754 2.2e-24 116.3 153 44.4
Oeu025989.1 Olea europaea HOM05D003499 ORTHO05D004754 2.8e-24 115.9 154 45.5
Oeu025990.2 Olea europaea HOM05D003499 ORTHO05D004754 2.8e-24 115.9 154 45.5
CiPaw.16G079000 Carya illinoinensis HOM05D003499 ORTHO05D004754 3.7e-24 115.5 158 49.4
QL04p095880 Quercus lobata HOM05D003499 ORTHO05D004754 6.3e-24 114.8 158 49.4
HPP92_017349 Vanilla planifolia HOM05D003499 ORTHO05D004754 1.1e-23 114.0 139 46.0
Cfa017771 Carpinus fangiana HOM05D003499 ORTHO05D004754 1.8e-23 113.2 158 49.4
Zm00001eb194730 Zea mays HOM05D003499 ORTHO05D004754 5.9e-22 108.2 154 42.9
COL.COLO4_25003 Corchorus olitorius HOM05D003499 ORTHO05D004754 1.9e-20 103.2 97 62.9
MBI18_g18638_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 1.6e-19 100.1 61 90.2
MBI18_g46779_MAGBIO Magnolia biondii HOM05D005270 ORTHO05D004199 1.6e-19 100.1 77 71.4
SEGI_27786 Sequoiadendron giganteum HOM05D003499 ORTHO05D004754 1.6e-19 100.1 143 44.1
SEGI_41216 Sequoiadendron giganteum HOM05D003499 ORTHO05D004754 1.6e-19 100.1 143 44.1
Sabra19G0031200 Salix brachista HOM05D000228 ORTHO05D001122 2.7e-19 99.4 155 43.2
Lsat_1_v5_gn_8_41780 Lactuca sativa HOM05D003499 ORTHO05D004754 4.7e-19 98.6 158 41.8
MBI11_g20914_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 4.7e-19 98.6 63 85.7
MBI06_g38942_MAGBIO Magnolia biondii HOM05D000211 ORTHO05D010488 7.9e-19 97.8 61 86.9
MBI16_g14341_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 2.3e-18 96.3 62 85.5
MBI03_g31610_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.1e-18 95.1 77 68.8
MBI15_g17264_MAGBIO Magnolia biondii HOM05D000394 ORTHO05D010488 6.7e-18 94.7 61 85.2
MBI19_g17783_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 6.7e-18 94.7 60 85.0
MBI15_g20025_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 8.8e-18 94.4 69 78.3
MBI08_g15145_MAGBIO Magnolia biondii HOM05D002807 ORTHO05D004199 1.1e-17 94.0 64 79.7
MBI01_g28135_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D004199 2.6e-17 92.8 63 81.0
MBI11_g19183_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 2.6e-17 92.8 61 82.0
MBI19_g46841_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 2.6e-17 92.8 62 80.6
MBI08_g18911_MAGBIO Magnolia biondii HOM05D001315 ORTHO05D004199 4.4e-17 92.0 62 82.3
MBI09_g19699_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 9.7e-17 90.9 60 83.3
MBI12_g04156_MAGBIO Magnolia biondii HOM05D000441 ORTHO05D004199 9.7e-17 90.9 61 82.0
AL2G39760 Arabidopsis lyrata HOM05D003499 ORTHO05D004754 1.7e-16 90.1 158 38.0
MBI15_g22767_MAGBIO Magnolia biondii HOM05D000200 ORTHO05D010534 2.2e-16 89.7 62 79.0
MBI15_g42947_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 2.2e-16 89.7 66 77.3
MBI17_g19035_MAGBIO Magnolia biondii HOM05D013691 ORTHO05D004199 2.2e-16 89.7 62 80.6
MBI17_g36742_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 2.2e-16 89.7 62 79.0
MBI15_g02309_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D010488 3.7e-16 89.0 59 81.4
MBI17_g42027_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004199 4.8e-16 88.6 61 78.7
MBI13_g39508_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 1.4e-15 87.0 115 53.0
MBI19_g01037_MAGBIO Magnolia biondii HOM05D016648 ORTHO05D004199 2.4e-15 86.3 124 43.5
MBI15_g27815_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 3.1e-15 85.9 57 82.5
MBI09_g41597_MAGBIO Magnolia biondii HOM05D022050 ORTHO05D025786 9.1e-15 84.3 72 68.1
MBI11_g02041_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D004199 2.0e-14 83.2 60 73.3
MBI01_g08264_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D010488 3.4e-14 82.4 60 78.3
Pp3c8_8020 Physcomitrium patens HOM05D003499 ORTHO05D004754 3.4e-14 82.4 158 37.3
AagrBONN_evm.TU.Sc2ySwM_344.3653 Anthoceros agrestis HOM05D003499 ORTHO05D004754 4.5e-14 82.0 158 34.8
Mapoly0042s0082 Marchantia polymorpha HOM05D003499 ORTHO05D004754 1.0e-13 80.9 158 32.3
MBI02_g41948_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 5.0e-13 78.6 62 71.0
MBI05_g41572_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004199 6.1e-11 71.6 72 59.7
MBI18_g14996_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 1.8e-10 70.1 70 61.4
MBI15_g44047_MAGBIO Magnolia biondii HOM05D001947 ORTHO05D025207 3.0e-10 69.3 49 77.6
PGR031G3814 Punica granatum HOM05D003499 ORTHO05D004754 2.6e-09 66.2 70 52.9
MBI16_g36773_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.2e-08 63.2 61 62.3
MBI19_g06118_MAGBIO Magnolia biondii HOM05D003114 ORTHO05D003519 6.3e-08 61.6 61 68.9
COL.COLO4_35707 Corchorus olitorius HOM05D003499 ORTHO05D004754 3.1e-07 59.3 167 35.3
Os02g0741500 Oryza sativa ssp. japonica HOM05D003499 ORTHO05D004754 3.1e-07 59.3 154 32.5
MBI09_g40770_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 7.0e-07 58.2 36 77.8
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 2.0e-06 56.6 47 66.0
HPP92_017337 Vanilla planifolia HOM05D003499 ORTHO05D004754 5.9e-06 55.1 64 45.3


User provided reference genes

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