Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g30758_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D005391 3.7e-76 288.1 143 100.0
MBI05_g32639_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D005391 3.5e-58 228.4 124 94.4
Nn2g10554 Nelumbo nucifera HOM05D000283 ORTHO05D005391 1.6e-50 203.0 132 75.0
Aqoxy5G01311 Aquilegia oxysepala HOM05D000283 ORTHO05D005391 7.7e-50 200.7 131 71.8
Thecc.10G063000 Theobroma cacao HOM05D000283 ORTHO05D005391 7.7e-50 200.7 131 74.8
EL10Ac2g03504 Beta vulgaris HOM05D000283 ORTHO05D005391 1.0e-49 200.3 130 73.1
TAR633G1628 Trochodendron aralioides HOM05D000283 ORTHO05D005391 1.3e-49 199.9 132 75.0
AUR62025540 Chenopodium quinoa HOM05D000283 ORTHO05D005391 2.2e-49 199.1 130 73.8
COL.COLO4_05804 Corchorus olitorius HOM05D000283 ORTHO05D005391 2.2e-49 199.1 131 74.0
Duzib106G1632 Durio zibethinus HOM05D000283 ORTHO05D005391 5.0e-49 198.0 131 71.8
PSO339G6458 Papaver somniferum HOM05D000283 ORTHO05D005391 6.5e-49 197.6 133 75.9
PSO384G3825 Papaver somniferum HOM05D000283 ORTHO05D005391 6.5e-49 197.6 133 75.9
Atru.chr12.592 Acer truncatum HOM05D000283 ORTHO05D005391 1.1e-48 196.8 131 73.3
AUR62042665 Chenopodium quinoa HOM05D000283 ORTHO05D005391 1.9e-48 196.1 130 72.3
ATR0681G328 Amborella trichopoda HOM05D000283 ORTHO05D005391 2.5e-48 195.7 129 72.1
MBI05_g22074_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D005391 3.2e-48 195.3 101 96.0
CSS0009141 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D005391 4.2e-48 194.9 126 73.8
Duzib128G1699 Durio zibethinus HOM05D000283 ORTHO05D005391 5.5e-48 194.5 132 70.5
Potri.010G213700 Populus trichocarpa HOM05D000283 ORTHO05D005391 7.2e-48 194.1 132 72.7
Gohir.A10G208900 Gossypium hirsutum HOM05D000283 ORTHO05D005391 1.2e-47 193.4 131 70.2
Ah.16g107830 Amaranthus hybridus HOM05D000283 ORTHO05D005391 1.6e-47 193.0 130 70.8
Gohir.D10G217200 Gossypium hirsutum HOM05D000283 ORTHO05D005391 1.6e-47 193.0 131 69.5
Gorai.011G242800 Gossypium raimondii HOM05D000283 ORTHO05D005391 1.6e-47 193.0 131 69.5
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 3.6e-47 191.8 131 69.5
Sabra10G0165400 Salix brachista HOM05D000283 ORTHO05D005391 3.6e-47 191.8 131 71.8
Haze_16972 Corylus avellana HOM05D000283 ORTHO05D005391 6.1e-47 191.0 131 69.5
Lj8C92G16 Lonicera japonica HOM05D000283 ORTHO05D005391 1.4e-46 189.9 129 70.5
VMungo0720G2546 Vigna mungo HOM05D000283 ORTHO05D005391 1.4e-46 189.9 129 68.2
QL08p057534 Quercus lobata HOM05D000283 ORTHO05D005391 4.0e-46 188.3 132 67.4
Glyma.20G242100 Glycine max HOM05D000283 ORTHO05D005391 5.2e-46 188.0 129 66.7
CsaV3_5G006520 Cucumis sativus L. HOM05D000283 ORTHO05D005391 6.8e-46 187.6 133 66.9
CiPaw.01G279800 Carya illinoinensis HOM05D000283 ORTHO05D005391 8.8e-46 187.2 130 69.2
CDE02G4519 Ceratophyllum demersum HOM05D000283 ORTHO05D005391 8.8e-46 187.2 129 69.0
MELO3C023808.2 Cucumis melo HOM05D000283 ORTHO05D005391 8.8e-46 187.2 133 67.7
Hma1.2p1_0207F.1_g087980 Hydrangea macrophylla HOM05D000283 ORTHO05D005391 8.8e-46 187.2 130 70.0
Ciclev10030610m.g Citrus clementina HOM05D000283 ORTHO05D005391 1.2e-45 186.8 131 70.2
Manes.10G039400 Manihot esculenta HOM05D000283 ORTHO05D005391 1.2e-45 186.8 130 72.3
Phvul.007G008100 Phaseolus vulgaris HOM05D000283 ORTHO05D005391 1.2e-45 186.8 128 67.2
Hund22435 Selenicereus undatus HOM05D000283 ORTHO05D005391 1.5e-45 186.4 128 71.1
SGA_v2.0_scaffold291G47345 Striga asiatica HOM05D000283 ORTHO05D005391 1.5e-45 186.4 130 66.2
arahy.Tifrunner.gnm1.ann1.79HMAA Arachis hypogaea HOM05D000283 ORTHO05D005391 2.0e-45 186.0 129 66.7
arahy.Tifrunner.gnm1.ann1.M4B7ES Arachis hypogaea HOM05D000283 ORTHO05D005391 2.0e-45 186.0 129 66.7
THA.LOC104809997 Tarenaya hassleriana HOM05D000283 ORTHO05D005391 2.0e-45 186.0 129 69.8
Cpa.g.sc1.303 Carica papaya HOM05D000283 ORTHO05D005391 2.6e-45 185.7 131 67.2
CANSAT56G0145 Cannabis sativa HOM05D000283 ORTHO05D005391 3.4e-45 185.3 130 67.7
Cc02_g08650 Coffea canephora HOM05D000283 ORTHO05D005391 3.4e-45 185.3 129 69.0
GSVIVG01032627001 Vitis vinifera HOM05D000283 ORTHO05D005391 3.4e-45 185.3 131 69.5
CDE09G1073 Ceratophyllum demersum HOM05D000283 ORTHO05D005391 4.4e-45 184.9 129 68.2
ECA232G0450 Erigeron canadensis HOM05D000283 ORTHO05D005391 4.4e-45 184.9 129 69.8
Medtr3g073080 Medicago truncatula HOM05D000283 ORTHO05D005391 4.4e-45 184.9 129 68.2
Potri.008G047700 Populus trichocarpa HOM05D000283 ORTHO05D005391 4.4e-45 184.9 132 68.2
Manes.07G106300 Manihot esculenta HOM05D000283 ORTHO05D005391 5.7e-45 184.5 130 70.0
THA.LOC104824248 Tarenaya hassleriana HOM05D000283 ORTHO05D005391 7.5e-45 184.1 129 67.4
CiPaw.02G178600 Carya illinoinensis HOM05D000283 ORTHO05D005391 9.8e-45 183.7 130 69.2
Lj5g0022773 Lotus japonicus HOM05D000283 ORTHO05D005391 9.8e-45 183.7 129 69.0
MSTRG.311 Avicennia marina HOM05D000283 ORTHO05D005391 1.3e-44 183.3 130 66.9
ClCG02G013670 Citrullus lanatus HOM05D000283 ORTHO05D005391 1.3e-44 183.3 127 67.7
SalBow6G0521 Salvia bowleyana HOM05D000283 ORTHO05D005391 1.3e-44 183.3 130 66.2
HPP92_015519 Vanilla planifolia HOM05D000283 ORTHO05D005391 1.3e-44 183.3 131 66.4
Lalb_Chr21g0307161 Lupinus albus HOM05D000283 ORTHO05D005391 2.2e-44 182.6 125 68.0
TWI15G0630 Tripterygium wilfordii HOM05D000283 ORTHO05D005391 2.2e-44 182.6 130 69.2
Psat6g239040 Pisum sativum HOM05D000283 ORTHO05D005391 2.8e-44 182.2 129 65.1
MD07G1184700 Malus domestica HOM05D000283 ORTHO05D005391 4.8e-44 181.4 131 68.7
TPR.G10417 Trifolium pratense HOM05D000283 ORTHO05D005391 6.3e-44 181.0 129 65.9
A05p07060 Brassica napus HOM05D000283 ORTHO05D005391 8.3e-44 180.6 131 65.6
BraA05t19671Z Brassica rapa HOM05D000283 ORTHO05D005391 8.3e-44 180.6 131 65.6
Glyma.10G292300 Glycine max HOM05D000283 ORTHO05D005391 8.3e-44 180.6 129 63.6
PGR142G1216 Punica granatum HOM05D000283 ORTHO05D005391 8.3e-44 180.6 131 64.9
BcaB06g29078 Brassica carinata HOM05D000283 ORTHO05D005391 1.8e-43 179.5 129 67.4
BcaC02g12050 Brassica carinata HOM05D000283 ORTHO05D005391 1.8e-43 179.5 131 65.6
C04p08450 Brassica napus HOM05D000283 ORTHO05D005391 1.8e-43 179.5 131 65.6
FAN06G1635 Fragaria x ananassa HOM05D000283 ORTHO05D005391 1.8e-43 179.5 130 68.5
Nitab4.5_0000914g0100 Nicotiana tabacum HOM05D000283 ORTHO05D005391 1.8e-43 179.5 128 67.2
FAN10G3387 Fragaria x ananassa HOM05D000283 ORTHO05D005391 2.4e-43 179.1 130 68.5
HanXRQChr15g0496771 Helianthus annuus HOM05D000283 ORTHO05D005391 2.4e-43 179.1 129 67.4
Lsat_1_v5_gn_9_66761 Lactuca sativa HOM05D000283 ORTHO05D004861 2.4e-43 179.1 129 67.4
AT2G39340 Arabidopsis thaliana HOM05D000283 ORTHO05D005391 3.1e-43 178.7 129 64.3
TWI38G2098 Tripterygium wilfordii HOM05D000283 ORTHO05D005391 4.1e-43 178.3 130 66.9
Actinidia38225 Actinidia chinensis HOM05D000283 ORTHO05D005391 5.4e-43 177.9 131 66.4
Migut.F01533 Erythranthe guttata HOM05D000283 ORTHO05D005391 5.4e-43 177.9 130 64.6
FvH4_7g20770 Fragaria vesca HOM05D000283 ORTHO05D005391 7.0e-43 177.6 130 67.7
FAN06G4940 Fragaria x ananassa HOM05D000283 ORTHO05D005391 7.0e-43 177.6 130 67.7
RcHm_v2.0_Chr1g0365011 Rosa chinensis HOM05D000283 ORTHO05D005391 7.0e-43 177.6 129 69.0
MD01G1117300 Malus domestica HOM05D000283 ORTHO05D005391 9.1e-43 177.2 130 66.9
Actinidia03006 Actinidia chinensis HOM05D000283 ORTHO05D005391 1.2e-42 176.8 132 62.9
Eucgr.G02777 Eucalyptus grandis HOM05D000283 ORTHO05D005391 1.6e-42 176.4 131 65.6
Prupe.2G224600 Prunus persica HOM05D000283 ORTHO05D005391 1.6e-42 176.4 130 66.9
AL4G36680 Arabidopsis lyrata HOM05D000283 ORTHO05D005391 2.0e-42 176.0 129 62.8
BolC4t22443H Brassica oleracea HOM05D000283 ORTHO05D005391 2.7e-42 175.6 131 64.9
Sabra08G0033800 Salix brachista HOM05D000283 ORTHO05D005391 2.7e-42 175.6 131 67.2
BcaC02g07413 Brassica carinata HOM05D000283 ORTHO05D005391 3.5e-42 175.3 129 64.3
C04p67220 Brassica napus HOM05D000283 ORTHO05D005391 3.5e-42 175.3 129 64.3
BolC4t28220H Brassica oleracea HOM05D000283 ORTHO05D005391 3.5e-42 175.3 129 64.3
BraA04t18452Z Brassica rapa HOM05D000283 ORTHO05D005391 3.5e-42 175.3 129 64.3
Carub.0004s2138 Capsella rubella HOM05D000283 ORTHO05D005391 4.5e-42 174.9 129 63.6
Lalb_Chr02g0143871 Lupinus albus HOM05D000283 ORTHO05D005391 5.9e-42 174.5 130 64.6
A04p30550 Brassica napus HOM05D000283 ORTHO05D005391 1.0e-41 173.7 129 63.6
Thhalv10016180m.g Eutrema salsugineum HOM05D000283 ORTHO05D005391 1.0e-41 173.7 129 63.6
Peaxi162Scf00015g02711 Petunia axillaris HOM05D000283 ORTHO05D005391 1.0e-41 173.7 128 66.4
CARHR134130 Cardamine hirsuta HOM05D000283 ORTHO05D005391 1.3e-41 173.3 131 64.1
Sed0023338 Sechium edule HOM05D000283 ORTHO05D005391 1.7e-41 172.9 128 64.1
TAR636G1569 Trochodendron aralioides HOM05D000283 ORTHO05D005391 1.7e-41 172.9 114 74.6
Solyc05g054910.3 Solanum lycopersicum HOM05D000283 ORTHO05D005391 2.3e-41 172.6 128 64.8
Sopen05g033370 Solanum pennellii HOM05D000283 ORTHO05D005391 2.3e-41 172.6 128 64.8
Aa31LG5G20290 Aethionema arabicum HOM05D000283 ORTHO05D005391 2.9e-41 172.2 129 65.1
Sed0010822 Sechium edule HOM05D000283 ORTHO05D005391 3.8e-41 171.8 127 64.6
Sp4g21650 Schrenkiella parvula HOM05D000283 ORTHO05D005391 6.5e-41 171.0 129 63.6
SpUn0018_0020 Schrenkiella parvula HOM05D000283 ORTHO05D005391 6.5e-41 171.0 129 63.6
CAN.G1602.11 Capsicum annuum HOM05D000283 ORTHO05D005391 3.3e-40 168.7 128 63.3
Zm00001eb289820 Zea mays HOM05D000283 ORTHO05D005391 3.3e-40 168.7 132 64.4
Ca_10211_v3 Cicer arietinum L. HOM05D000283 ORTHO05D005391 9.5e-40 167.2 120 65.8
Os05g0462600 Oryza sativa ssp. japonica HOM05D000283 ORTHO05D005391 9.5e-40 167.2 129 62.0
Zm00001eb351500 Zea mays HOM05D000283 ORTHO05D005391 9.5e-40 167.2 128 64.8
AagrBONN_evm.TU.Sc2ySwM_117.607 Anthoceros agrestis HOM05D000283 ORTHO05D005391 2.1e-39 166.0 130 58.5
BcaB02g09134 Brassica carinata HOM05D000283 ORTHO05D005391 6.1e-39 164.5 131 61.8
DCAR_005053 Daucus carota HOM05D000283 ORTHO05D005391 1.8e-38 162.9 168 52.4
Mapoly0013s0152 Marchantia polymorpha HOM05D000283 ORTHO05D005391 2.3e-38 162.5 130 55.4
SMO143G0323 Selaginella moellendorffii HOM05D000283 ORTHO05D005391 3.0e-38 162.2 130 60.0
Nitab4.5_0010706g0030 Nicotiana tabacum HOM05D000283 ORTHO05D005391 4.0e-38 161.8 121 63.6
SEGI_03051 Sequoiadendron giganteum HOM05D000283 ORTHO05D005391 6.3e-36 154.5 129 58.1
Pp3c1_11990 Physcomitrium patens HOM05D000283 ORTHO05D005391 2.4e-35 152.5 130 56.9
Pp3c2_24860 Physcomitrium patens HOM05D000283 ORTHO05D005391 2.3e-33 146.0 130 56.2
DCAR_027697 Daucus carota HOM05D000283 ORTHO05D005391 1.5e-32 143.3 112 65.2
HPP92_015567 Vanilla planifolia HOM05D000283 ORTHO05D005391 4.3e-32 141.7 131 56.5
CBR_g53551 Chara braunii HOM05D000283 ORTHO05D005391 4.7e-31 138.3 158 49.4
Oeu050639.2 Olea europaea HOM05D000283 ORTHO05D005391 6.8e-30 134.4 102 61.8
Actinidia29200 Actinidia chinensis HOM05D000283 ORTHO05D019495 5.4e-27 124.8 100 61.0
SMO141G0080 Selaginella moellendorffii HOM05D000283 ORTHO05D005391 2.7e-26 122.5 133 48.9
unitig_749.g14014 Utricularia gibba HOM05D000283 ORTHO05D005391 3.1e-22 109.0 93 57.0
CSS0032527 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D005391 2.9e-20 102.4 85 60.0
HanXRQChr09g0246591 Helianthus annuus HOM05D000283 ORTHO05D005391 1.5e-16 90.1 68 63.2
MCO13G063 Micromonas commoda HOM05D000283 ORTHO05D005391 2.5e-16 89.4 144 38.9
PRCOL_00005565 Prasinoderma coloniale HOM05D000283 ORTHO05D005391 4.3e-16 88.6 131 40.5
BraA03t11440Z Brassica rapa HOM05D000283 ORTHO05D019495 3.1e-14 82.4 74 48.6
AL5G26090 Arabidopsis lyrata HOM05D000283 ORTHO05D005391 4.0e-14 82.0 68 60.3
A03p22060 Brassica napus HOM05D000283 ORTHO05D019495 3.9e-09 65.5 59 52.5
Cre06.g258100 Chlamydomonas reinhardtii HOM05D000283 ORTHO05D005391 5.1e-09 65.1 170 28.2
SHI28196 Sapria himalayana HOM05D000283 ORTHO05D005391 5.1e-09 65.1 67 50.7
Medtr1g115940 Medicago truncatula HOM05D000283 ORTHO05D019495 4.3e-08 62.0 51 51.0


User provided reference genes

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