Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g16451_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D016140 2.7e-42 174.9 86 100.0
MBI17_g23872_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D016140 4.8e-23 110.9 77 71.4
MBI03_g27157_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D002129 1.8e-22 109.0 57 91.2
MBI18_g30378_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D016140 2.4e-22 108.6 62 83.9
MBI17_g29022_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 4.7e-18 94.4 55 83.6
MBI02_g34022_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D016140 2.0e-16 89.0 48 85.4
MBI18_g09025_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D010488 4.8e-15 84.3 48 85.4
GSVIVG01031306001 Vitis vinifera HOM05D001642 ORTHO05D002129 8.6e-12 73.6 47 70.2
CDE12G0244 Ceratophyllum demersum HOM05D001642 ORTHO05D002129 1.9e-11 72.4 47 66.0
CDE01G0203 Ceratophyllum demersum HOM05D001642 ORTHO05D002129 3.3e-11 71.6 47 63.8
TAR365G0482 Trochodendron aralioides HOM05D001642 ORTHO05D002129 3.3e-11 71.6 47 70.2
TAR365G0965 Trochodendron aralioides HOM05D001642 ORTHO05D002129 3.3e-11 71.6 47 70.2
Dinv30930 Davidia involucrata HOM05D001642 ORTHO05D002129 1.6e-10 69.3 44 70.5
Duzib128G0933 Durio zibethinus HOM05D001642 ORTHO05D002129 1.4e-09 66.2 47 61.7
CiPaw.07G034600 Carya illinoinensis HOM05D001642 ORTHO05D002129 3.0e-09 65.1 48 66.7
TAR365G0980 Trochodendron aralioides HOM05D001642 ORTHO05D002129 4.0e-09 64.7 47 68.1
CiPaw.07G034300 Carya illinoinensis HOM05D001642 ORTHO05D002129 5.2e-09 64.3 47 61.7
MBI16_g08507_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D016140 5.2e-09 64.3 48 70.8
QL11p000167 Quercus lobata HOM05D001642 ORTHO05D002129 5.2e-09 64.3 47 59.6
Duzib106G1569 Durio zibethinus HOM05D001642 ORTHO05D002129 6.8e-09 63.9 47 59.6
CAN.G1374.11 Capsicum annuum HOM05D001642 ORTHO05D002129 8.9e-09 63.5 48 62.5
Lj5C321T4 Lonicera japonica HOM05D001642 ORTHO05D002129 8.9e-09 63.5 44 65.9
CSS0002490 Camellia sinensis var. sinensis HOM05D001642 ORTHO05D002129 1.2e-08 63.2 44 63.6
CSS0028187 Camellia sinensis var. sinensis HOM05D001642 ORTHO05D002129 1.2e-08 63.2 44 63.6
Lj5C321T11 Lonicera japonica HOM05D001642 ORTHO05D002129 1.2e-08 63.2 44 63.6
Haze_04013 Corylus avellana HOM05D001642 ORTHO05D002129 1.5e-08 62.8 54 53.7
Hma1.2p1_1243F.1_g269959 Hydrangea macrophylla HOM05D001642 ORTHO05D002129 1.5e-08 62.8 44 63.6
Hma1.2p1_1553F.1_g290360 Hydrangea macrophylla HOM05D001642 ORTHO05D002129 1.5e-08 62.8 44 63.6
Sc16g0009300 Simmondsia chinensis HOM05D001642 ORTHO05D002129 1.5e-08 62.8 47 55.3
Os04g0321600 Oryza sativa ssp. japonica HOM05D001642 ORTHO05D002129 2.0e-08 62.4 42 69.0
Os08g0404350 Oryza sativa ssp. japonica HOM05D001642 ORTHO05D002129 2.0e-08 62.4 42 69.0
CiPaw.07G034700 Carya illinoinensis HOM05D001642 ORTHO05D002129 2.6e-08 62.0 47 55.3
Dinv24498 Davidia involucrata HOM05D001642 ORTHO05D002129 2.6e-08 62.0 44 70.5
Peaxi162Scf00357g00047 Petunia axillaris HOM05D001642 ORTHO05D002129 3.4e-08 61.6 47 59.6
Sabra13G0003800 Salix brachista HOM05D001642 ORTHO05D002129 3.4e-08 61.6 44 63.6
Atru.chr2.1956 Acer truncatum HOM05D001642 ORTHO05D002129 4.4e-08 61.2 47 55.3
Potri.013G004600 Populus trichocarpa HOM05D001642 ORTHO05D002129 4.4e-08 61.2 47 57.4
VMungo0540G0662 Vigna mungo HOM05D001642 ORTHO05D002129 4.4e-08 61.2 47 55.3
Cfa006743 Carpinus fangiana HOM05D001642 ORTHO05D002129 5.7e-08 60.8 47 57.4
Phvul.006G086400 Phaseolus vulgaris HOM05D001642 ORTHO05D002129 5.7e-08 60.8 47 55.3
Phvul.006G086500 Phaseolus vulgaris HOM05D001642 ORTHO05D002129 5.7e-08 60.8 47 55.3
Prupe.6G306700 Prunus persica HOM05D001642 ORTHO05D002129 5.7e-08 60.8 56 48.2
Rhsim11G0099900 Rhododendron simsii HOM05D001642 ORTHO05D002129 5.7e-08 60.8 74 44.6
Dinv24499 Davidia involucrata HOM05D001642 ORTHO05D002129 7.5e-08 60.5 45 60.0
Gohir.A13G177400 Gossypium hirsutum HOM05D001642 ORTHO05D002129 7.5e-08 60.5 47 55.3
Gorai.013G209300 Gossypium raimondii HOM05D001642 ORTHO05D002129 7.5e-08 60.5 47 55.3
Thecc.05G327700 Theobroma cacao HOM05D001642 ORTHO05D002129 7.5e-08 60.5 47 55.3
Rhsim02G0168200 Rhododendron simsii HOM05D001642 ORTHO05D002129 9.8e-08 60.1 48 60.4
Prupe.6G306600 Prunus persica HOM05D001642 ORTHO05D002129 1.3e-07 59.7 48 52.1
Dinv30931 Davidia involucrata HOM05D001642 ORTHO05D002129 1.7e-07 59.3 47 57.4
Gohir.D13G184000 Gossypium hirsutum HOM05D001642 ORTHO05D002129 1.7e-07 59.3 47 55.3
CSS0002222 Camellia sinensis var. sinensis HOM05D001642 ORTHO05D002129 2.2e-07 58.9 47 55.3
CSS0026403 Camellia sinensis var. sinensis HOM05D001642 ORTHO05D002129 2.2e-07 58.9 47 55.3
Gohir.A11G275000 Gossypium hirsutum HOM05D001642 ORTHO05D002129 2.2e-07 58.9 47 55.3
Gohir.D11G285400 Gossypium hirsutum HOM05D001642 ORTHO05D002129 2.2e-07 58.9 47 55.3
Gorai.007G308600 Gossypium raimondii HOM05D001642 ORTHO05D002129 2.2e-07 58.9 47 55.3
Hma1.2p1_0716F.1_g208070 Hydrangea macrophylla HOM05D001642 ORTHO05D016140 2.2e-07 58.9 47 57.4
Hma1.2p1_1170F.1_g263480 Hydrangea macrophylla HOM05D001642 ORTHO05D016140 2.2e-07 58.9 47 57.4
Lj6g0001510 Lotus japonicus HOM05D001642 ORTHO05D002129 2.2e-07 58.9 47 53.2
Lalb_Chr15g0085261 Lupinus albus HOM05D001642 ORTHO05D016140 2.2e-07 58.9 47 55.3
Nn3g18368 Nelumbo nucifera HOM05D001642 ORTHO05D002129 2.2e-07 58.9 45 57.8
Nitab4.5_0002783g0010 Nicotiana tabacum HOM05D001642 ORTHO05D002129 2.2e-07 58.9 48 58.3
Actinidia16891 Actinidia chinensis HOM05D001642 ORTHO05D002129 2.8e-07 58.5 44 56.8
Lalb_Chr20g0117101 Lupinus albus HOM05D001642 ORTHO05D002129 2.8e-07 58.5 47 53.2
MD12G1201500 Malus domestica HOM05D001642 ORTHO05D002129 2.8e-07 58.5 48 56.2
Manes.08G108300 Manihot esculenta HOM05D001642 ORTHO05D002129 2.8e-07 58.5 47 55.3
Nitab4.5_0005558g0040 Nicotiana tabacum HOM05D001642 ORTHO05D002129 3.7e-07 58.2 48 56.2
Thecc.05G327600 Theobroma cacao HOM05D001642 ORTHO05D002129 3.7e-07 58.2 47 55.3
GSVIVG01031308001 Vitis vinifera HOM05D001642 ORTHO05D002129 3.7e-07 58.2 47 55.3
Atru.chr12.1599 Acer truncatum HOM05D001642 ORTHO05D002129 4.9e-07 57.8 47 57.4
Gohir.A13G177300 Gossypium hirsutum HOM05D001642 ORTHO05D002129 4.9e-07 57.8 47 53.2
Gorai.013G209200 Gossypium raimondii HOM05D001642 ORTHO05D002129 4.9e-07 57.8 47 53.2
MBI17_g18113_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D016140 4.9e-07 57.8 26 92.3
Oeu000083.1 Olea europaea HOM05D001642 ORTHO05D002129 4.9e-07 57.8 46 58.7
Sed0012617 Sechium edule HOM05D001642 ORTHO05D002129 4.9e-07 57.8 47 53.2
Atru.chr12.1600 Acer truncatum HOM05D001642 ORTHO05D002129 6.3e-07 57.4 47 57.4
arahy.Tifrunner.gnm1.ann1.CVX4HS Arachis hypogaea HOM05D001642 ORTHO05D002129 6.3e-07 57.4 47 53.2
Glyma.11G210335 Glycine max HOM05D001642 ORTHO05D002129 6.3e-07 57.4 47 51.1
Potri.005G005300 Populus trichocarpa HOM05D001642 ORTHO05D002129 6.3e-07 57.4 44 61.4
Sopen01g044490 Solanum pennellii HOM05D001642 ORTHO05D002129 6.3e-07 57.4 46 60.9
PGSC0003DMG400018294 Solanum tuberosum HOM05D001642 ORTHO05D002129 6.3e-07 57.4 47 57.4
Ciclev10010953m.g Citrus clementina HOM05D001642 ORTHO05D002129 8.3e-07 57.0 48 52.1
Gohir.D13G183900 Gossypium hirsutum HOM05D001642 ORTHO05D002129 8.3e-07 57.0 47 53.2
MD04G1188800 Malus domestica HOM05D001642 ORTHO05D002129 8.3e-07 57.0 51 54.9
Solyc01g101030.4 Solanum lycopersicum HOM05D001642 ORTHO05D002129 8.3e-07 57.0 46 60.9
Ciclev10010951m.g Citrus clementina HOM05D001642 ORTHO05D002129 1.1e-06 56.6 49 53.1
Cc02_g35560 Coffea canephora HOM05D001642 ORTHO05D002129 1.1e-06 56.6 44 54.5
CsaV3_6G052250 Cucumis sativus L. HOM05D001642 ORTHO05D002129 1.1e-06 56.6 47 55.3
Duzib177G0327 Durio zibethinus HOM05D001642 ORTHO05D002129 1.1e-06 56.6 47 53.2
MD04G1188700 Malus domestica HOM05D001642 ORTHO05D002129 1.1e-06 56.6 48 54.2
Glyma.18G044600 Glycine max HOM05D001642 ORTHO05D002129 1.4e-06 56.2 47 48.9
MD12G1201600 Malus domestica HOM05D001642 ORTHO05D002129 1.4e-06 56.2 51 49.0
Sabra05G0001800 Salix brachista HOM05D001642 ORTHO05D002129 1.4e-06 56.2 48 54.2
Sabra05G0015900 Salix brachista HOM05D001642 ORTHO05D002129 1.4e-06 56.2 48 54.2
Solyc01g101020.4 Solanum lycopersicum HOM05D001642 ORTHO05D002129 1.4e-06 56.2 47 55.3
PGSC0003DMG400018250 Solanum tuberosum HOM05D001642 ORTHO05D002129 1.4e-06 56.2 48 58.3
Aqoxy5G01998 Aquilegia oxysepala HOM05D001642 ORTHO05D002129 1.8e-06 55.8 47 57.4
Cfa006744 Carpinus fangiana HOM05D001642 ORTHO05D002129 1.8e-06 55.8 47 51.1
ClCG01G025060 Citrullus lanatus HOM05D001642 ORTHO05D002129 1.8e-06 55.8 50 50.0
Haze_04012 Corylus avellana HOM05D001642 ORTHO05D002129 1.8e-06 55.8 47 51.1
Sopen01g044480 Solanum pennellii HOM05D001642 ORTHO05D002129 1.8e-06 55.8 47 55.3
ATR0982G001 Amborella trichopoda HOM05D001642 ORTHO05D002129 2.4e-06 55.5 45 57.8
arahy.Tifrunner.gnm1.ann1.LDJL5U Arachis hypogaea HOM05D001642 ORTHO05D002129 2.4e-06 55.5 47 51.1
PSO017G1336 Papaver somniferum HOM05D001642 ORTHO05D002129 4.1e-06 54.7 34 64.7
PSO170G0832 Papaver somniferum HOM05D001642 ORTHO05D002129 4.1e-06 54.7 34 64.7
MELO3C007085.2 Cucumis melo HOM05D001642 ORTHO05D002129 5.4e-06 54.3 47 51.1
DCAR_029800 Daucus carota HOM05D001642 ORTHO05D002129 5.4e-06 54.3 43 60.5
Nitab4.5_0009690g0010 Nicotiana tabacum HOM05D001642 ORTHO05D002129 5.4e-06 54.3 48 52.1
SGA_v2.0_scaffold104G30153 Striga asiatica HOM05D001642 ORTHO05D002129 5.4e-06 54.3 47 48.9
Glyma.18G044500 Glycine max HOM05D001642 ORTHO05D002129 7.0e-06 53.9 47 48.9
Solyc10g006770.4 Solanum lycopersicum HOM05D001642 ORTHO05D002129 7.0e-06 53.9 45 55.6
Sopen10g002690 Solanum pennellii HOM05D001642 ORTHO05D002129 7.0e-06 53.9 45 55.6
TPR.G26670 Trifolium pratense HOM05D001642 ORTHO05D002129 7.0e-06 53.9 47 48.9
CAN.G1374.12 Capsicum annuum HOM05D001642 ORTHO05D002129 9.2e-06 53.5 48 54.2
Rhsim11G0099800 Rhododendron simsii HOM05D001642 ORTHO05D002129 9.2e-06 53.5 44 61.4


User provided reference genes

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