Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g44458_MAGBIO Magnolia biondii HOM05D004509 ORTHO05D005568 5.7e-253 877.1 443 100.0
MBI04_g41911_MAGBIO Magnolia biondii HOM05D004509 ORTHO05D005568 2.5e-200 702.2 423 86.5
TAR374G1004 Trochodendron aralioides HOM05D004509 ORTHO05D005568 8.3e-151 537.7 468 62.6
Nn6g33992 Nelumbo nucifera HOM05D004509 ORTHO05D005568 2.5e-139 499.6 483 57.8
PSO170G1118 Papaver somniferum HOM05D004509 ORTHO05D005568 1.2e-130 470.7 470 56.6
Actinidia13576 Actinidia chinensis HOM05D004509 ORTHO05D005568 2.1e-130 469.9 468 55.6
PSO017G1204 Papaver somniferum HOM05D004509 ORTHO05D005568 3.6e-130 469.2 470 56.4
Dinv28569 Davidia involucrata HOM05D004509 ORTHO05D005568 1.0e-129 467.6 471 56.9
QL09p019881 Quercus lobata HOM05D004509 ORTHO05D005568 8.9e-129 464.5 467 55.2
Thecc.03G156200 Theobroma cacao HOM05D004509 ORTHO05D005568 2.0e-128 463.4 468 55.8
GSVIVG01018636001 Vitis vinifera HOM05D004509 ORTHO05D005568 5.8e-128 461.8 468 56.4
Aqoxy7G00754 Aquilegia oxysepala HOM05D004509 ORTHO05D005568 2.2e-127 459.9 469 54.6
Cfa008172 Carpinus fangiana HOM05D004509 ORTHO05D005568 4.9e-127 458.8 470 55.7
Dinv22949 Davidia involucrata HOM05D004509 ORTHO05D005568 1.4e-126 457.2 470 55.5
CiPaw.04G060100 Carya illinoinensis HOM05D004509 ORTHO05D005568 3.5e-125 452.6 470 54.0
Prupe.2G277400 Prunus persica HOM05D004509 ORTHO05D005568 7.8e-125 451.4 468 54.1
Manes.06G135100 Manihot esculenta HOM05D004509 ORTHO05D005568 3.9e-124 449.1 468 54.3
CiPaw.03G093600 Carya illinoinensis HOM05D004509 ORTHO05D005568 1.1e-123 447.6 467 53.7
Duzib068G0492 Durio zibethinus HOM05D004509 ORTHO05D005568 5.6e-123 445.3 468 53.8
CSS0008253 Camellia sinensis var. sinensis HOM05D004509 ORTHO05D005568 9.5e-123 444.5 468 54.1
FAN10G0128 Fragaria x ananassa HOM05D004509 ORTHO05D005568 1.6e-122 443.7 444 56.1
Gohir.A12G198700 Gossypium hirsutum HOM05D004509 ORTHO05D005568 3.6e-122 442.6 468 53.6
CSS0001277 Camellia sinensis var. sinensis HOM05D004509 ORTHO05D005568 6.2e-122 441.8 464 54.7
CSS0023984 Camellia sinensis var. sinensis HOM05D004509 ORTHO05D005568 6.2e-122 441.8 464 54.7
Gohir.D12G201400 Gossypium hirsutum HOM05D004509 ORTHO05D005568 8.0e-122 441.4 468 53.4
Gorai.008G216500 Gossypium raimondii HOM05D004509 ORTHO05D005568 8.0e-122 441.4 468 53.4
FAN06G3392 Fragaria x ananassa HOM05D004509 ORTHO05D005568 1.4e-121 440.7 444 55.9
TWI23G1058 Tripterygium wilfordii HOM05D004509 ORTHO05D005568 2.3e-121 439.9 479 53.2
FAN01G2021 Fragaria x ananassa HOM05D004509 ORTHO05D005568 6.8e-121 438.3 444 55.2
Potri.001G124000 Populus trichocarpa HOM05D004509 ORTHO05D005568 4.4e-120 435.6 463 52.5
FvH4_7g27570 Fragaria vesca HOM05D004509 ORTHO05D005568 5.8e-120 435.3 470 52.8
MD07G1254100 Malus domestica HOM05D004509 ORTHO05D005568 7.5e-120 434.9 470 52.3
Manes.14G035800 Manihot esculenta HOM05D004509 ORTHO05D005568 7.5e-120 434.9 468 53.0
FAN03G1842 Fragaria x ananassa HOM05D004509 ORTHO05D005568 9.8e-120 434.5 470 52.8
RcHm_v2.0_Chr1g0374441 Rosa chinensis HOM05D004509 ORTHO05D005568 9.8e-120 434.5 469 53.1
Sabra01G0095600 Salix brachista HOM05D004509 ORTHO05D005568 9.8e-120 434.5 468 51.5
Actinidia24699 Actinidia chinensis HOM05D004509 ORTHO05D005568 2.2e-119 433.3 463 53.6
TAR375G0675 Trochodendron aralioides HOM05D004509 ORTHO05D005568 2.2e-119 433.3 465 54.6
Ciclev10004605m.g Citrus clementina HOM05D004509 ORTHO05D005568 3.7e-119 432.6 450 53.3
Potri.003G109400 Populus trichocarpa HOM05D004509 ORTHO05D005568 6.4e-119 431.8 464 52.2
Cc02_g04230 Coffea canephora HOM05D004509 ORTHO05D005568 2.4e-118 429.9 468 53.8
Psat5g226800 Pisum sativum HOM05D004509 ORTHO05D005568 5.1e-116 422.2 469 50.5
Rhsim03G0168100 Rhododendron simsii HOM05D004509 ORTHO05D005568 5.1e-116 422.2 448 52.5
Hma1.2p1_1640F.1_g295070 Hydrangea macrophylla HOM05D004509 ORTHO05D005568 1.5e-115 420.6 470 52.8
Lj3g0006861 Lotus japonicus HOM05D004509 ORTHO05D005568 1.9e-115 420.2 465 51.8
Lj8C42G3 Lonicera japonica HOM05D004509 ORTHO05D005568 3.3e-115 419.5 487 52.0
Hma1.2p1_1132F.1_g260350 Hydrangea macrophylla HOM05D004509 ORTHO05D005568 7.3e-115 418.3 467 52.7
Glyma.06G316600 Glycine max HOM05D004509 ORTHO05D005568 2.1e-114 416.8 466 51.1
vmacro06795 Vaccinium macrocarpon HOM05D004509 ORTHO05D005568 2.8e-114 416.4 449 51.9
Ca_14040_v3 Cicer arietinum L. HOM05D004509 ORTHO05D005568 3.1e-113 412.9 466 50.2
Aa31sc16G230 Aethionema arabicum HOM05D004509 ORTHO05D005568 6.8e-113 411.8 470 51.9
Medtr3g007760 Medicago truncatula HOM05D004509 ORTHO05D005568 1.2e-112 411.0 467 49.9
MELO3C014338.2 Cucumis melo HOM05D004509 ORTHO05D005568 1.5e-112 410.6 467 50.5
TPR.G12300 Trifolium pratense HOM05D004509 ORTHO05D005568 3.4e-112 409.5 468 49.1
Sc13g0007910 Simmondsia chinensis HOM05D004509 ORTHO05D005568 1.3e-111 407.5 464 51.3
HanXRQChr14g0461391 Helianthus annuus HOM05D004509 ORTHO05D005568 2.2e-111 406.8 467 52.2
Sed0019493 Sechium edule HOM05D004509 ORTHO05D005568 2.9e-111 406.4 466 50.0
CAN.G839.2 Capsicum annuum HOM05D004509 ORTHO05D005568 1.4e-110 404.1 468 51.1
Sp7g23250 Schrenkiella parvula HOM05D004509 ORTHO05D005568 1.4e-110 404.1 464 50.9
THA.LOC104825064 Tarenaya hassleriana HOM05D004509 ORTHO05D005568 1.4e-110 404.1 461 50.3
Thhalv10024774m.g Eutrema salsugineum HOM05D004509 ORTHO05D005568 1.9e-110 403.7 464 50.6
Nitab4.5_0000262g0140 Nicotiana tabacum HOM05D004509 ORTHO05D005568 2.4e-110 403.3 468 50.9
THA.LOC104808282 Tarenaya hassleriana HOM05D004509 ORTHO05D005568 4.1e-110 402.5 464 50.4
Sed0007620 Sechium edule HOM05D004509 ORTHO05D005568 5.4e-110 402.1 465 49.9
BolC7t45898H Brassica oleracea HOM05D004509 ORTHO05D005568 7.1e-110 401.7 465 51.0
Duzib205G0424 Durio zibethinus HOM05D004509 ORTHO05D005568 7.1e-110 401.7 421 53.7
AL7G27910 Arabidopsis lyrata HOM05D004509 ORTHO05D005568 1.2e-109 401.0 464 51.5
ECA238G4038 Erigeron canadensis HOM05D004509 ORTHO05D005568 1.2e-109 401.0 461 49.5
BcaC06g32827 Brassica carinata HOM05D004509 ORTHO05D005568 1.6e-109 400.6 463 51.2
C07p54120 Brassica napus HOM05D004509 ORTHO05D005568 2.7e-109 399.8 465 50.8
EL10Ac3g05841 Beta vulgaris HOM05D004509 ORTHO05D005568 7.8e-109 398.3 489 49.3
AL8G25740 Arabidopsis lyrata HOM05D004509 ORTHO05D005568 1.0e-108 397.9 465 50.3
BcaB03g12459 Brassica carinata HOM05D004509 ORTHO05D005568 1.7e-108 397.1 464 51.1
ATR0589G031 Amborella trichopoda HOM05D004509 ORTHO05D005568 2.3e-108 396.7 474 51.3
Gohir.A07G041300 Gossypium hirsutum HOM05D004509 ORTHO05D005568 2.3e-108 396.7 458 51.5
Sopen06g010960 Solanum pennellii HOM05D004509 ORTHO05D005568 2.3e-108 396.7 469 50.7
Carub.0007s1579 Capsella rubella HOM05D004509 ORTHO05D005568 3.0e-108 396.4 464 51.1
CsaV3_6G036820 Cucumis sativus L. HOM05D004509 ORTHO05D005568 3.0e-108 396.4 467 49.7
FAN06G0097 Fragaria x ananassa HOM05D004509 ORTHO05D005568 3.9e-108 396.0 467 50.7
AT4G25230 Arabidopsis thaliana HOM05D004509 ORTHO05D005568 5.1e-108 395.6 464 50.9
A03p55840 Brassica napus HOM05D004509 ORTHO05D005568 5.1e-108 395.6 465 49.7
AUR62002199 Chenopodium quinoa HOM05D004509 ORTHO05D005568 5.1e-108 395.6 483 49.9
Lalb_Chr15g0079611 Lupinus albus HOM05D004509 ORTHO05D005568 6.6e-108 395.2 468 49.1
CARHR232640 Cardamine hirsuta HOM05D004509 ORTHO05D005568 1.5e-107 394.0 466 50.2
BraA03t14655Z Brassica rapa HOM05D004509 ORTHO05D005568 2.5e-107 393.3 465 49.7
Eucgr.K00157 Eucalyptus grandis HOM05D004509 ORTHO05D005568 4.7e-106 389.0 469 47.5
Ah.13g066850 Amaranthus hybridus HOM05D004509 ORTHO05D005568 8.1e-106 388.3 506 47.4
Glyma.04G130500 Glycine max HOM05D004509 ORTHO05D005568 8.1e-106 388.3 447 49.9
Hund11825 Selenicereus undatus HOM05D004509 ORTHO05D005568 1.4e-105 387.5 456 50.9
BcaC07g38180 Brassica carinata HOM05D004509 ORTHO05D005568 4.0e-105 386.0 467 50.1
A08p21270 Brassica napus HOM05D004509 ORTHO05D005568 4.0e-105 386.0 467 50.1
BraA08t34076Z Brassica rapa HOM05D004509 ORTHO05D005568 4.0e-105 386.0 467 50.1
MSTRG.8823 Avicennia marina HOM05D004509 ORTHO05D005568 8.9e-105 384.8 466 50.4
Carub.0008s1147 Capsella rubella HOM05D004509 ORTHO05D005568 3.4e-104 382.9 463 48.4
DCAR_018107 Daucus carota HOM05D004509 ORTHO05D005568 3.4e-104 382.9 465 50.5
arahy.Tifrunner.gnm1.ann1.4JD3YM Arachis hypogaea HOM05D004509 ORTHO05D005568 9.9e-104 381.3 437 51.7
HanXRQChr07g0205911 Helianthus annuus HOM05D004509 ORTHO05D005568 9.9e-104 381.3 470 49.1
PGR042G2749 Punica granatum HOM05D004509 ORTHO05D005568 9.9e-104 381.3 466 47.9
Rhsim03G0167900 Rhododendron simsii HOM05D004509 ORTHO05D005568 2.1e-101 373.6 415 50.6
Nitab4.5_0000448g0150 Nicotiana tabacum HOM05D004509 ORTHO05D005568 1.7e-100 370.5 472 48.3
SGA_v2.0_scaffold70G23600 Striga asiatica HOM05D004509 ORTHO05D005568 6.6e-100 368.6 467 49.0
Peaxi162Scf00054g02212 Petunia axillaris HOM05D004509 ORTHO05D005568 1.1e-99 367.9 449 49.2
AT5G51450 Arabidopsis thaliana HOM05D004509 ORTHO05D005568 1.5e-99 367.5 483 46.6
Migut.F00473 Erythranthe guttata HOM05D004509 ORTHO05D005568 1.5e-99 367.5 468 48.3
Lalb_Chr18g0049081 Lupinus albus HOM05D004509 ORTHO05D005568 1.5e-99 367.5 445 48.3
Oeu015322.1 Olea europaea HOM05D004509 ORTHO05D005568 2.8e-98 363.2 467 48.6
Sabra03G0075900 Salix brachista HOM05D004509 ORTHO05D005568 2.4e-97 360.1 476 45.6
CDE11G0295 Ceratophyllum demersum HOM05D004509 ORTHO05D005568 4.0e-97 359.4 437 47.8
BolC1t01999H Brassica oleracea HOM05D004509 ORTHO05D005568 1.2e-96 357.8 495 44.6
AUR62015503 Chenopodium quinoa HOM05D004509 ORTHO05D005568 2.6e-96 356.7 479 45.9
Gohir.D07G045400 Gossypium hirsutum HOM05D004509 ORTHO05D005568 6.4e-95 352.1 428 49.3
Cpa.g.sc3.319 Carica papaya HOM05D004509 ORTHO05D005568 3.9e-92 342.8 387 51.4
Lsat_1_v5_gn_2_129181 Lactuca sativa HOM05D004509 ORTHO05D005568 2.5e-91 340.1 498 45.4
Atru.chr1.723 Acer truncatum HOM05D004509 ORTHO05D005568 7.3e-91 338.6 362 52.5
Gorai.001G048500 Gossypium raimondii HOM05D004509 ORTHO05D005568 1.6e-90 337.4 456 46.7
Oeu022490.1 Olea europaea HOM05D004509 ORTHO05D005568 1.2e-88 331.3 464 46.1
HPP92_021040 Vanilla planifolia HOM05D004509 ORTHO05D005568 3.4e-88 329.7 461 43.6
Sp6g13610 Schrenkiella parvula HOM05D004509 ORTHO05D005568 9.9e-88 328.2 464 44.4
HPP92_027424 Vanilla planifolia HOM05D004509 ORTHO05D005568 1.4e-86 324.3 460 43.5
Os07g0484300 Oryza sativa ssp. japonica HOM05D004509 ORTHO05D005568 7.9e-85 318.5 466 43.3
BcaC09g50792 Brassica carinata HOM05D004509 ORTHO05D005568 4.0e-81 306.2 429 44.3
ClCG09G013200 Citrullus lanatus HOM05D004509 ORTHO05D005568 1.3e-79 301.2 349 51.3
Zm00001eb105020 Zea mays HOM05D004509 ORTHO05D005568 1.1e-78 298.1 464 41.4
Zm00001eb321470 Zea mays HOM05D004509 ORTHO05D005568 3.9e-76 289.7 467 40.7
BraA01t01605Z Brassica rapa HOM05D004509 ORTHO05D005568 6.9e-73 278.9 375 45.1
A01p16520 Brassica napus HOM05D004509 ORTHO05D005568 2.6e-72 276.9 368 45.4
Mapoly0141s0003 Marchantia polymorpha HOM05D004509 ORTHO05D005568 1.3e-71 274.6 497 36.8
Mapoly0259s0001 Marchantia polymorpha HOM05D004509 ORTHO05D005568 1.3e-71 274.6 497 36.8
Phvul.005G010100 Phaseolus vulgaris HOM05D001952 ORTHO05D005568 5.7e-67 259.2 320 47.2
COL.COLO4_14126 Corchorus olitorius HOM05D004509 ORTHO05D005568 2.9e-63 246.9 244 55.3
SEGI_31032 Sequoiadendron giganteum HOM05D004509 ORTHO05D005568 1.2e-61 241.5 373 41.6
SMO298G0006 Selaginella moellendorffii HOM05D004509 ORTHO05D005568 3.0e-60 236.9 486 34.8
Pp3c13_9770 Physcomitrium patens HOM05D004509 ORTHO05D005568 2.0e-59 234.2 480 33.8
Hund04598 Selenicereus undatus HOM05D004509 ORTHO05D005568 6.3e-58 229.2 222 56.3
Pp3c3_10340 Physcomitrium patens HOM05D004509 ORTHO05D005568 2.4e-57 227.3 489 33.1
Lalb_Chr04g0264301 Lupinus albus HOM05D004509 ORTHO05D005568 3.1e-57 226.9 219 55.7
Lalb_Chr04g0264311 Lupinus albus HOM05D004509 ORTHO05D005568 2.3e-52 210.7 191 58.1
Lsat_1_v5_gn_9_52140 Lactuca sativa HOM05D004509 ORTHO05D005568 6.3e-50 202.6 464 33.8
Phvul.005G010300 Phaseolus vulgaris HOM05D004509 ORTHO05D005568 4.7e-45 186.4 167 59.3
CDE02G3300 Ceratophyllum demersum HOM05D004509 ORTHO05D005568 2.0e-43 181.0 222 47.3
BcaNung06355 Brassica carinata HOM05D004509 ORTHO05D005568 2.2e-42 177.6 224 45.5
unitig_52.g17762 Utricularia gibba HOM05D000486 ORTHO05D000375 3.1e-25 120.6 201 44.8
Lsat_1_v5_gn_3_74740 Lactuca sativa HOM05D004509 ORTHO05D005568 9.1e-25 119.0 127 48.8
BcaC07g38179 Brassica carinata HOM05D004509 ORTHO05D005568 5.0e-23 113.2 94 59.6
Thhalv10014220m.g Eutrema salsugineum HOM05D004509 ORTHO05D005568 1.1e-22 112.1 119 51.3
CDE02G0565 Ceratophyllum demersum HOM05D000698 ORTHO05D000839 3.0e-20 104.0 107 55.1
CBR_g4830 Chara braunii HOM05D004509 ORTHO05D005568 7.5e-19 99.4 470 24.3
SEGI_07953 Sequoiadendron giganteum HOM05D004509 ORTHO05D005568 1.2e-16 92.0 81 55.6
SEGI_41248 Sequoiadendron giganteum HOM05D004509 ORTHO05D005568 3.0e-15 87.4 71 57.7
arahy.Tifrunner.gnm1.ann1.WP6JS3 Arachis hypogaea HOM05D004509 ORTHO05D005568 1.2e-13 82.0 68 58.8
Lsat_1_v5_gn_4_100040 Lactuca sativa HOM05D004509 ORTHO05D005568 5.2e-12 76.6 113 38.9
Ca_06750_v3 Cicer arietinum L. HOM05D004509 ORTHO05D005568 1.2e-11 75.5 54 63.0
EL10Ac1g01861 Beta vulgaris HOM05D004509 ORTHO05D005568 2.9e-10 70.9 202 30.2


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