Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI03_g40814_MAGBIO Magnolia biondii HOM05D002811 ORTHO05D003053 2.7e-55 218.4 109 100.0
Peaxi162Scf00209g00226 Petunia axillaris HOM05D002811 ORTHO05D003053 1.1e-27 126.7 79 75.9
Dinv24963 Davidia involucrata HOM05D002811 ORTHO05D003053 2.7e-26 122.1 69 79.7
Manes.01G189300 Manihot esculenta HOM05D002811 ORTHO05D003053 2.7e-26 122.1 69 76.8
Atru.chr11.1896 Acer truncatum HOM05D002811 ORTHO05D003053 3.5e-26 121.7 69 76.8
DCAR_007135 Daucus carota HOM05D002811 ORTHO05D003053 4.5e-26 121.3 71 76.1
CSS0003597 Camellia sinensis var. sinensis HOM05D002811 ORTHO05D003053 5.9e-26 120.9 66 81.8
CSS0037400 Camellia sinensis var. sinensis HOM05D002811 ORTHO05D003053 5.9e-26 120.9 66 81.8
QL03p065467 Quercus lobata HOM05D002811 ORTHO05D003053 5.9e-26 120.9 68 80.9
Thecc.02G354200 Theobroma cacao HOM05D002811 ORTHO05D003053 5.9e-26 120.9 70 78.6
BcaB03g13099 Brassica carinata HOM05D002811 ORTHO05D003053 1.0e-25 120.2 69 76.8
Hma1.2p1_0265F.1_g106610 Hydrangea macrophylla HOM05D002811 ORTHO05D003053 1.0e-25 120.2 69 75.4
Gorai.013G077400 Gossypium raimondii HOM05D002811 ORTHO05D003053 1.3e-25 119.8 70 75.7
TAR374G0396 Trochodendron aralioides HOM05D002811 ORTHO05D003053 1.3e-25 119.8 69 81.2
MSTRG.677 Avicennia marina HOM05D002811 ORTHO05D003053 5.0e-25 117.9 69 76.8
CAN.G279.16 Capsicum annuum HOM05D002811 ORTHO05D003053 5.0e-25 117.9 69 78.3
BraA08t35120Z Brassica rapa HOM05D002811 ORTHO05D003053 6.5e-25 117.5 69 73.9
Nitab4.5_0010498g0030 Nicotiana tabacum HOM05D002811 ORTHO05D003053 6.5e-25 117.5 69 76.8
PGR119G0719 Punica granatum HOM05D002811 ORTHO05D003053 6.5e-25 117.5 69 76.8
BcaC07g38735 Brassica carinata HOM05D002811 ORTHO05D003053 8.6e-25 117.1 69 73.9
BolC8t49290H Brassica oleracea HOM05D002811 ORTHO05D003053 8.6e-25 117.1 69 73.9
CiPaw.05G139000 Carya illinoinensis HOM05D002811 ORTHO05D003053 8.6e-25 117.1 68 77.9
Potri.008G149100 Populus trichocarpa HOM05D002811 ORTHO05D003053 8.6e-25 117.1 69 73.9
Sabra08G0113300 Salix brachista HOM05D002811 ORTHO05D003053 8.6e-25 117.1 107 60.7
Sopen05g003070 Solanum pennellii HOM05D002811 ORTHO05D003053 1.1e-24 116.7 69 76.8
PGSC0003DMG400017627 Solanum tuberosum HOM05D002811 ORTHO05D003053 1.1e-24 116.7 69 76.8
A08p31990 Brassica napus HOM05D002811 ORTHO05D003053 1.5e-24 116.3 69 72.5
Sp1g12780 Schrenkiella parvula HOM05D002811 ORTHO05D003053 1.5e-24 116.3 69 72.5
GSVIVG01020061001 Vitis vinifera HOM05D002811 ORTHO05D003053 1.5e-24 116.3 69 78.3
AL1G26300 Arabidopsis lyrata HOM05D002811 ORTHO05D003053 1.9e-24 115.9 69 72.5
ECA246G2524 Erigeron canadensis HOM05D000131 ORTHO05D003053 1.9e-24 115.9 69 73.9
Migut.L01333 Erythranthe guttata HOM05D002811 ORTHO05D003053 1.9e-24 115.9 70 77.1
AT1G14410 Arabidopsis thaliana HOM05D002811 ORTHO05D003053 2.5e-24 115.5 69 72.5
Nitab4.5_0000879g0050 Nicotiana tabacum HOM05D002811 ORTHO05D003053 2.5e-24 115.5 69 76.8
Carub.0001s1411 Capsella rubella HOM05D002811 ORTHO05D003053 3.3e-24 115.2 69 71.0
CiPaw.06G081400 Carya illinoinensis HOM05D002811 ORTHO05D003053 3.3e-24 115.2 69 76.8
Lsat_1_v5_gn_3_50760 Lactuca sativa HOM05D002811 ORTHO05D003053 3.3e-24 115.2 69 72.5
Solyc05g007100.3 Solanum lycopersicum HOM05D002811 ORTHO05D003053 3.3e-24 115.2 69 75.4
Dinv34209 Davidia involucrata HOM05D002811 ORTHO05D003053 4.2e-24 114.8 69 75.4
AL5G11930 Arabidopsis lyrata HOM05D002811 ORTHO05D003053 9.5e-24 113.6 69 72.5
Eucgr.G02539 Eucalyptus grandis HOM05D002811 ORTHO05D003053 9.5e-24 113.6 69 75.4
SalBow2G0512 Salvia bowleyana HOM05D002811 ORTHO05D003053 9.5e-24 113.6 73 72.6
AT2G02740 Arabidopsis thaliana HOM05D002811 ORTHO05D003053 1.2e-23 113.2 69 71.0
Ciclev10032427m.g Citrus clementina HOM05D002811 ORTHO05D003053 1.2e-23 113.2 69 71.0
C08p16630 Brassica napus HOM05D002811 ORTHO05D003053 1.6e-23 112.8 69 71.0
Cc11_g13390 Coffea canephora HOM05D002811 ORTHO05D003053 1.6e-23 112.8 69 75.4
Nn3g17141 Nelumbo nucifera HOM05D002811 ORTHO05D003053 1.6e-23 112.8 69 73.9
Phvul.003G068800 Phaseolus vulgaris HOM05D002811 ORTHO05D003053 1.6e-23 112.8 69 72.5
Prupe.1G269100 Prunus persica HOM05D002811 ORTHO05D003053 2.1e-23 112.5 69 71.0
BcaC06g31219 Brassica carinata HOM05D002811 ORTHO05D003053 2.8e-23 112.1 69 71.0
BcaC06g34043 Brassica carinata HOM05D002811 ORTHO05D003053 2.8e-23 112.1 69 71.0
C07p33350 Brassica napus HOM05D002811 ORTHO05D003053 2.8e-23 112.1 69 71.0
BolC7t43845H Brassica oleracea HOM05D002811 ORTHO05D003053 2.8e-23 112.1 69 71.0
Thhalv10004763m.g Eutrema salsugineum HOM05D002811 ORTHO05D003053 2.8e-23 112.1 69 71.0
Nn4g23066 Nelumbo nucifera HOM05D002811 ORTHO05D003053 2.8e-23 112.1 69 73.9
RcHm_v2.0_Chr4g0440511 Rosa chinensis HOM05D002811 ORTHO05D003053 2.8e-23 112.1 69 72.5
Sp2g13850 Schrenkiella parvula HOM05D002811 ORTHO05D003053 2.8e-23 112.1 69 69.6
FvH4_4g31850 Fragaria vesca HOM05D002811 ORTHO05D003053 3.6e-23 111.7 69 72.5
FAN12G3575 Fragaria x ananassa HOM05D002811 ORTHO05D003053 3.6e-23 111.7 69 72.5
FAN17G1220 Fragaria x ananassa HOM05D002811 ORTHO05D003053 3.6e-23 111.7 69 72.5
ClCG08G008880 Citrullus lanatus HOM05D002811 ORTHO05D003053 4.7e-23 111.3 71 71.8
MD16G1077800 Malus domestica HOM05D002811 ORTHO05D003053 4.7e-23 111.3 69 71.0
VMungo0251G1690 Vigna mungo HOM05D002811 ORTHO05D003053 6.1e-23 110.9 69 72.5
Carub.0005s0165 Capsella rubella HOM05D002811 ORTHO05D003053 8.0e-23 110.5 69 69.6
Duzib268G0877 Durio zibethinus HOM05D002811 ORTHO05D003053 8.0e-23 110.5 67 71.6
THA.LOC104805139 Tarenaya hassleriana HOM05D002811 ORTHO05D003053 8.0e-23 110.5 69 69.6
CARHR014850 Cardamine hirsuta HOM05D002811 ORTHO05D003053 1.4e-22 109.8 70 68.6
CARHR145170 Cardamine hirsuta HOM05D002811 ORTHO05D003053 1.4e-22 109.8 69 69.6
MELO3C019785.2 Cucumis melo HOM05D002811 ORTHO05D003053 1.4e-22 109.8 70 72.9
CsaV3_6G036290 Cucumis sativus L. HOM05D002811 ORTHO05D003053 1.4e-22 109.8 70 72.9
Actinidia31186 Actinidia chinensis HOM05D002811 ORTHO05D003053 1.8e-22 109.4 69 68.1
Aa31LG2G7520 Aethionema arabicum HOM05D002811 ORTHO05D003053 1.8e-22 109.4 69 69.6
COL.COLO4_23042 Corchorus olitorius HOM05D002811 ORTHO05D003053 1.8e-22 109.4 70 70.0
CDE05G1853 Ceratophyllum demersum HOM05D002811 ORTHO05D003053 3.0e-22 108.6 69 71.0
ATR0001G008 Amborella trichopoda HOM05D002811 ORTHO05D003053 5.2e-22 107.8 69 72.5
CANSAT64G0034 Cannabis sativa HOM05D002811 ORTHO05D003053 5.2e-22 107.8 69 71.0
HanXRQChr15g0478051 Helianthus annuus HOM05D002811 ORTHO05D003053 5.2e-22 107.8 69 71.0
arahy.Tifrunner.gnm1.ann1.YZ1SAE Arachis hypogaea HOM05D002811 ORTHO05D003053 6.8e-22 107.5 68 69.1
A06p43510 Brassica napus HOM05D002811 ORTHO05D003053 6.8e-22 107.5 70 68.6
BraA06t27236Z Brassica rapa HOM05D002811 ORTHO05D003053 6.8e-22 107.5 70 68.6
Glyma.08G297200 Glycine max HOM05D002811 ORTHO05D003053 6.8e-22 107.5 69 73.9
TWI18G1272 Tripterygium wilfordii HOM05D002811 ORTHO05D003053 8.9e-22 107.1 69 68.1
MD13G1078000 Malus domestica HOM05D002811 ORTHO05D003053 1.5e-21 106.3 69 68.1
AUR62005735 Chenopodium quinoa HOM05D002811 ORTHO05D003053 2.0e-21 105.9 74 62.2
Lj4g0017465 Lotus japonicus HOM05D002811 ORTHO05D003053 3.4e-21 105.1 69 69.6
FAN07G0400 Fragaria x ananassa HOM05D002811 ORTHO05D003053 4.4e-21 104.8 71 69.0
Cfa009022 Carpinus fangiana HOM05D002811 ORTHO05D003053 5.7e-21 104.4 60 76.7
Hund05904 Selenicereus undatus HOM05D002811 ORTHO05D003053 5.7e-21 104.4 78 61.5
SGA_v2.0_scaffold302G47852 Striga asiatica HOM05D002811 ORTHO05D003053 5.7e-21 104.4 65 70.8
EL10Ac6g13159 Beta vulgaris HOM05D002811 ORTHO05D003053 7.5e-21 104.0 69 68.1
Lalb_Chr05g0230261 Lupinus albus HOM05D002811 ORTHO05D003053 7.5e-21 104.0 70 67.1
THA.LOC104822102 Tarenaya hassleriana HOM05D002811 ORTHO05D003053 7.5e-21 104.0 70 71.4
AUR62028826 Chenopodium quinoa HOM05D002811 ORTHO05D003053 2.2e-20 102.4 69 65.2
vmacro16331 Vaccinium macrocarpon HOM05D002811 ORTHO05D003053 2.2e-20 102.4 69 65.2
Lalb_Chr17g0340411 Lupinus albus HOM05D002811 ORTHO05D003053 2.8e-20 102.1 69 65.2
Oeu001589.1 Olea europaea HOM05D000046 ORTHO05D001818 4.9e-20 101.3 69 69.6
PSO832G4142 Papaver somniferum HOM05D002811 ORTHO05D003053 6.3e-20 100.9 73 71.2
Sed0010977 Sechium edule HOM05D002811 ORTHO05D003053 1.4e-19 99.8 71 64.8
Lalb_Chr04g0256301 Lupinus albus HOM05D002811 ORTHO05D003053 5.4e-19 97.8 69 63.8
Rhsim12G0130500 Rhododendron simsii HOM05D002811 ORTHO05D003053 5.4e-19 97.8 69 59.4
Aqoxy3G03287 Aquilegia oxysepala HOM05D002811 ORTHO05D003053 1.2e-18 96.7 77 63.6
Actinidia08218 Actinidia chinensis HOM05D002811 ORTHO05D003053 2.7e-18 95.5 63 66.7
HPP92_021792 Vanilla planifolia HOM05D002811 ORTHO05D003053 5.9e-18 94.4 69 63.8
TPR.G33277 Trifolium pratense HOM05D002811 ORTHO05D003053 1.3e-17 93.2 69 59.4
Os06g0145800 Oryza sativa ssp. japonica HOM05D002811 ORTHO05D003053 2.3e-17 92.4 69 62.3
Medtr8g468570 Medicago truncatula HOM05D002811 ORTHO05D003053 4.3e-16 88.2 73 57.5
Ca_11514_v3 Cicer arietinum L. HOM05D002811 ORTHO05D003053 5.6e-16 87.8 71 57.7
Psat4g130960 Pisum sativum HOM05D002811 ORTHO05D003053 9.5e-16 87.0 74 55.4
Medtr5g038560 Medicago truncatula HOM05D002811 ORTHO05D003053 1.2e-15 86.7 70 64.3
Glyma.02G019900 Glycine max HOM05D002811 ORTHO05D003053 8.0e-15 84.0 62 61.3
Glyma.02G020400 Glycine max HOM05D002811 ORTHO05D003053 1.0e-14 83.6 62 62.9
Lj2g0012688 Lotus japonicus HOM05D002811 ORTHO05D003053 2.0e-13 79.3 57 66.7
Glyma.01G043000 Glycine max HOM05D002811 ORTHO05D003053 1.7e-12 76.3 72 52.8
Phvul.002G089800 Phaseolus vulgaris HOM05D002811 ORTHO05D003053 1.7e-12 76.3 62 59.7
SEGI_31475 Sequoiadendron giganteum HOM05D002811 ORTHO05D003053 5.4e-11 71.2 70 47.1
TPR.G13775 Trifolium pratense HOM05D002811 ORTHO05D003053 7.0e-11 70.9 68 50.0
Psat2g124480 Pisum sativum HOM05D002811 ORTHO05D003053 6.0e-10 67.8 66 53.0
SEGI_34690 Sequoiadendron giganteum HOM05D002811 ORTHO05D003053 7.8e-10 67.4 45 64.4
SEGI_11117 Sequoiadendron giganteum HOM05D002811 ORTHO05D003053 8.0e-07 57.4 43 51.2
Haze_12053 Corylus avellana HOM05D002811 ORTHO05D003053 1.1e-06 57.0 40 67.5
Gohir.D08G249400 Gossypium hirsutum HOM05D002811 ORTHO05D003053 1.4e-06 56.6 69 39.1
Cpa.g.sc1007.4 Carica papaya HOM05D002811 ORTHO05D003053 2.3e-06 55.8 39 66.7
Aqoxy6G00040 Aquilegia oxysepala HOM05D002811 ORTHO05D003053 4.0e-06 55.1 75 40.0
Gorai.004G266000 Gossypium raimondii HOM05D002811 ORTHO05D003053 5.2e-06 54.7 69 39.1


User provided reference genes

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