Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C645T11 Lonicera japonica HOM05D004944 ORTHO05D005989 1.2e-89 333.2 168 100.0
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 2.9e-56 222.2 166 70.5
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 2.5e-55 219.2 166 68.1
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 3.2e-55 218.8 166 69.3
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 9.4e-55 217.2 164 68.9
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 1.2e-54 216.9 165 69.7
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 2.1e-54 216.1 166 68.7
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 3.6e-54 215.3 166 68.7
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 6.1e-54 214.5 166 68.7
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 7.9e-54 214.2 166 68.7
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 1.0e-53 213.8 166 68.1
CSS0047173 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 1.4e-53 213.4 168 69.0
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 2.3e-53 212.6 166 65.7
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 8.8e-53 210.7 166 67.5
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 1.1e-52 210.3 166 66.9
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 2.5e-52 209.1 165 67.3
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 2.5e-52 209.1 166 66.9
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 5.7e-52 208.0 167 66.5
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 9.7e-52 207.2 166 63.3
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 3.7e-51 205.3 166 63.3
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 4.8e-51 204.9 166 66.3
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 6.3e-51 204.5 166 63.9
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 8.2e-51 204.1 163 66.9
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 2.4e-50 202.6 166 66.3
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 2.4e-50 202.6 166 65.1
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 3.1e-50 202.2 166 65.1
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 5.3e-50 201.4 164 65.2
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 6.9e-50 201.1 164 65.2
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 6.9e-50 201.1 166 65.1
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 9.1e-50 200.7 166 63.9
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 9.1e-50 200.7 166 63.3
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 1.2e-49 200.3 166 62.7
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 1.2e-49 200.3 166 61.4
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 1.5e-49 199.9 166 64.5
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 2.0e-49 199.5 166 64.5
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 2.0e-49 199.5 167 63.5
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 2.6e-49 199.1 166 64.5
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 2.6e-49 199.1 166 63.9
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 4.5e-49 198.4 166 64.5
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 5.9e-49 198.0 166 64.5
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 5.9e-49 198.0 164 63.4
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 5.9e-49 198.0 166 63.3
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 1.0e-48 197.2 165 62.4
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.7e-48 196.4 166 63.3
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 2.2e-48 196.1 166 63.9
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 2.2e-48 196.1 166 63.3
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 2.9e-48 195.7 166 62.0
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 2.9e-48 195.7 202 56.4
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 6.5e-48 194.5 166 60.8
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 1.1e-47 193.7 164 62.8
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.1e-47 193.7 164 62.8
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 1.9e-47 193.0 154 65.6
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 1.9e-47 193.0 166 62.0
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 3.2e-47 192.2 164 61.6
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 3.2e-47 192.2 166 61.4
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 3.2e-47 192.2 166 61.4
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 5.5e-47 191.4 166 60.8
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 5.5e-47 191.4 166 62.0
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 5.5e-47 191.4 164 62.8
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 7.2e-47 191.0 167 62.3
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 7.2e-47 191.0 165 61.8
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 7.2e-47 191.0 165 61.8
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 1.2e-46 190.3 167 62.3
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 1.2e-46 190.3 167 62.3
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 1.6e-46 189.9 167 61.7
Peaxi162Scf00309g00016 Petunia axillaris HOM05D004944 ORTHO05D005989 2.7e-46 189.1 166 61.4
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 2.7e-46 189.1 164 59.1
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 3.6e-46 188.7 166 62.7
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 4.7e-46 188.3 167 61.7
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 6.1e-46 188.0 167 61.7
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 6.1e-46 188.0 167 61.7
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 6.1e-46 188.0 167 61.7
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 6.1e-46 188.0 164 58.5
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 2.3e-45 186.0 164 62.2
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 6.7e-45 184.5 167 59.3
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 1.1e-44 183.7 163 58.3
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 2.6e-44 182.6 167 58.7
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 3.3e-44 182.2 166 59.6
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 7.4e-44 181.0 164 58.5
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 1.7e-43 179.9 166 58.4
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 1.8e-42 176.4 166 56.0
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 3.1e-42 175.6 167 56.9
ATR0721G036 Amborella trichopoda HOM05D004944 ORTHO05D005989 5.3e-42 174.9 166 57.8
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 5.3e-42 174.9 164 59.8
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 7.0e-42 174.5 163 57.7
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 7.0e-42 174.5 166 58.4
vmacro13724 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 2.0e-41 172.9 108 79.6
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 4.5e-41 171.8 166 57.2
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 7.7e-41 171.0 163 55.8
CSS0009317 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 1.9e-39 166.4 168 55.4
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 2.3e-37 159.5 166 54.2
HPP92_001442 Vanilla planifolia HOM05D004944 ORTHO05D005989 3.0e-37 159.1 166 54.2
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 6.7e-37 157.9 163 50.9
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 1.7e-35 153.3 166 48.8
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 1.1e-34 150.6 171 50.3
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 1.7e-32 143.3 168 44.6
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 5.0e-32 141.7 108 66.7
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 8.5e-32 141.0 166 53.0
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 4.2e-31 138.7 166 52.4
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 5.5e-31 138.3 102 62.7
AUR62002442 Chenopodium quinoa HOM05D004944 ORTHO05D005989 8.0e-30 134.4 170 44.1
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 4.0e-29 132.1 172 48.8
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 4.5e-25 118.6 164 43.9
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 8.5e-24 114.4 168 38.1
Oeu006103.1 Olea europaea HOM05D004944 ORTHO05D005989 9.4e-23 110.9 166 43.4
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 9.4e-23 110.9 167 39.5
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 1.6e-22 110.2 165 41.8
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 1.1e-18 97.4 167 32.3
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 1.2e-12 77.4 182 26.9
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 4.4e-12 75.5 67 53.7
SHI03977 Sapria himalayana HOM05D004944 ORTHO05D005989 4.7e-06 55.5 116 35.3


User provided reference genes

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