Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 0.0e+00 1539.6 790 100.0
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 3.8e-292 1008.1 765 68.9
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 1.5e-288 996.1 741 69.8
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 9.5e-267 923.7 792 63.0
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 6.2e-266 921.0 751 63.8
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 8.1e-258 894.0 801 61.5
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 3.1e-257 892.1 769 62.3
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 3.5e-253 878.6 769 60.7
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 4.8e-250 868.2 766 60.6
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 2.4e-249 865.9 761 60.2
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 1.3e-247 860.1 767 60.1
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 1.1e-246 857.1 767 59.8
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 9.9e-240 833.9 739 60.2
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 2.2e-239 832.8 806 56.2
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 2.2e-239 832.8 740 59.5
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 1.1e-238 830.5 777 58.3
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 1.9e-238 829.7 799 57.6
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 7.1e-238 827.8 721 61.0
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 2.1e-237 826.2 740 59.1
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 3.0e-236 822.4 787 56.3
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 8.7e-236 820.8 771 57.2
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 7.4e-235 817.8 801 55.7
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 7.4e-235 817.8 739 59.1
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 9.6e-235 817.4 730 59.7
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 9.0e-233 810.8 753 57.8
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 2.6e-232 809.3 748 57.8
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.1e-230 803.9 730 59.3
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 2.5e-230 802.7 748 57.8
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 9.3e-230 800.8 798 55.6
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 1.2e-229 800.4 789 55.6
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 2.1e-229 799.7 802 55.0
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 9.6e-227 790.8 690 60.4
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 1.4e-225 786.9 831 53.1
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 2.6e-224 782.7 768 55.2
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 1.0e-223 780.8 729 57.8
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 1.7e-223 780.0 934 49.5
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 4.2e-222 775.4 771 54.9
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 5.5e-222 775.0 744 55.6
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 7.2e-222 774.6 691 58.6
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 2.1e-221 773.1 749 55.7
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 6.1e-221 771.5 810 53.0
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 1.3e-220 770.4 788 53.2
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 2.3e-220 769.6 756 55.0
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 1.5e-219 766.9 704 57.1
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 5.7e-219 765.0 753 54.4
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 3.7e-218 762.3 685 59.9
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 5.3e-217 758.4 793 52.7
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 6.9e-217 758.1 644 62.9
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.2e-216 757.3 778 53.5
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 1.1e-214 750.7 714 55.5
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 2.1e-213 746.5 721 55.6
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 2.7e-213 746.1 787 51.2
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 6.1e-213 745.0 789 53.6
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 3.0e-212 742.7 764 54.1
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 3.9e-212 742.3 707 56.0
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 2.5e-211 739.6 796 51.8
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 6.3e-210 734.9 782 51.7
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 2.0e-208 729.9 787 51.6
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 2.6e-208 729.6 749 52.1
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 4.5e-208 728.8 716 56.3
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 1.7e-207 726.9 735 55.8
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 2.9e-207 726.1 708 54.4
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 2.9e-207 726.1 727 53.6
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 5.0e-207 725.3 754 51.7
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.1e-206 724.2 754 51.7
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 5.5e-206 721.8 1116 41.8
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 7.2e-206 721.5 726 54.1
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 9.4e-206 721.1 731 52.5
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 3.0e-204 716.1 779 51.6
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 6.7e-204 714.9 701 54.2
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 1.1e-203 714.1 729 52.7
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 1.3e-202 710.7 769 51.0
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 2.8e-202 709.5 779 50.4
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 8.2e-202 708.0 701 54.2
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 1.1e-201 707.6 771 50.3
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 1.1e-201 707.6 696 53.9
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 1.3e-199 700.7 760 50.3
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 1.1e-198 697.6 736 52.7
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 4.2e-198 695.7 782 50.3
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 2.3e-196 689.9 785 50.8
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 7.5e-195 684.9 799 49.7
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 1.7e-194 683.7 732 52.2
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 8.2e-194 681.4 687 51.7
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 2.4e-193 679.9 704 51.3
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 4.1e-193 679.1 704 51.1
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 5.3e-193 678.7 704 51.1
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 5.3e-193 678.7 704 51.3
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 3.5e-192 676.0 770 48.8
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 5.9e-192 675.2 769 48.9
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 7.5e-187 658.3 730 51.4
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 1.8e-185 653.7 773 48.0
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 2.4e-185 653.3 659 53.6
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 5.0e-183 645.6 791 48.4
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 6.6e-175 618.6 685 51.7
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 2.3e-172 610.1 705 51.8
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 8.3e-170 601.7 750 46.4
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 1.2e-160 571.2 642 47.7
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 7.1e-153 545.4 788 42.1
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 8.1e-149 531.9 499 55.7
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 2.0e-139 500.7 410 64.6
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 1.5e-123 448.0 753 39.4
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 2.4e-100 370.9 434 47.9
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 3.1e-100 370.5 654 38.5
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 3.8e-98 363.6 305 61.0
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.5e-94 351.7 717 36.7
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 2.0e-94 351.3 650 35.4
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 1.5e-91 341.7 610 36.6
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 2.5e-89 334.3 747 32.7
Cpa.g.sc25.195 Carica papaya HOM05D005942 ORTHO05D007209 9.7e-86 322.4 261 61.3
HPP92_016646 Vanilla planifolia HOM05D005942 ORTHO05D007209 4.5e-83 313.5 362 47.2
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 7.2e-73 279.6 660 31.2
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 7.0e-52 209.9 294 42.9
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 1.2e-48 199.1 616 27.6
CAN.G635.26 Capsicum annuum HOM05D005942 ORTHO05D007209 6.6e-42 176.8 180 51.7
Sabra01G0130200 Salix brachista HOM05D005942 ORTHO05D007209 8.9e-39 166.4 642 27.3
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 3.7e-37 161.0 670 24.9
Actinidia21840 Actinidia chinensis HOM05D005942 ORTHO05D007209 6.4e-37 160.2 167 55.1
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 6.0e-35 153.7 833 24.1
Actinidia21839 Actinidia chinensis HOM05D005942 ORTHO05D007209 5.8e-30 137.1 126 59.5
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 4.9e-29 134.0 242 38.4
SEGI_14143 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 3.1e-23 114.8 158 44.3
SGA_v2.0_scaffold253G45152 Striga asiatica HOM05D005942 ORTHO05D007209 1.0e-18 99.8 145 44.1
BolC2t09032H Brassica oleracea HOM05D005942 ORTHO05D007209 1.3e-16 92.8 92 50.0
Dinv03716 Davidia involucrata HOM05D000349 ORTHO05D029215 8.1e-16 90.1 88 60.2
CBR_g19531 Chara braunii HOM05D005942 ORTHO05D007209 2.4e-15 88.6 178 34.3
C02p29840 Brassica napus HOM05D005942 ORTHO05D007209 2.0e-14 85.5 74 55.4
MBI15_g00935_MAGBIO Magnolia biondii HOM05D001716 ORTHO05D016670 2.2e-13 82.0 78 55.1
Glyma.19G262250 Glycine max HOM05D005942 ORTHO05D007209 6.4e-13 80.5 173 35.3
Haze_02542 Corylus avellana HOM05D005942 ORTHO05D007209 1.1e-09 69.7 68 52.9
SEGI_28404 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 1.1e-09 69.7 73 45.2
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 2.8e-08 65.1 49 59.2


User provided reference genes

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