Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A469T59 Lonicera japonica HOM05D001674 ORTHO05D008374 1.5e-297 1025.4 500 100.0
Dinv38776 Davidia involucrata HOM05D001674 ORTHO05D008374 1.1e-154 550.8 524 57.6
Hma1.2p1_0322F.1_g124930 Hydrangea macrophylla HOM05D001674 ORTHO05D008374 2.1e-147 526.6 528 54.5
Cfa019293 Carpinus fangiana HOM05D001674 ORTHO05D008374 1.1e-135 487.6 516 51.2
Atru.chr9.282 Acer truncatum HOM05D001674 ORTHO05D008374 1.4e-135 487.3 505 51.7
Haze_07675 Corylus avellana HOM05D001674 ORTHO05D008374 5.1e-133 478.8 546 48.7
GSVIVG01007916001 Vitis vinifera HOM05D001674 ORTHO05D008374 1.1e-132 477.6 493 53.8
DCAR_026018 Daucus carota HOM05D001674 ORTHO05D008374 2.0e-132 476.9 501 53.1
TAR371G0783 Trochodendron aralioides HOM05D001674 ORTHO05D008374 3.3e-132 476.1 546 50.2
Cc00_g02240 Coffea canephora HOM05D001674 ORTHO05D008374 1.3e-131 474.2 506 51.8
Prupe.5G200300 Prunus persica HOM05D001674 ORTHO05D008374 4.1e-130 469.2 499 51.1
TWI15G0866 Tripterygium wilfordii HOM05D001674 ORTHO05D008374 6.9e-130 468.4 514 51.2
CANSAT80G0757 Cannabis sativa HOM05D001674 ORTHO05D008374 2.0e-129 466.8 373 63.0
Thecc.03G096600 Theobroma cacao HOM05D001674 ORTHO05D008374 2.0e-129 466.8 414 58.5
Glyma.06G199800 Glycine max HOM05D001674 ORTHO05D008374 1.3e-128 464.2 511 51.3
Cpa.g.sc94.1 Carica papaya HOM05D001674 ORTHO05D008374 2.5e-127 459.9 496 51.2
MD14G1208200 Malus domestica HOM05D001674 ORTHO05D008374 7.2e-127 458.4 503 49.7
COL.COLO4_36884 Corchorus olitorius HOM05D001674 ORTHO05D008374 9.4e-127 458.0 406 58.1
Lalb_Chr22g0355251 Lupinus albus HOM05D001674 ORTHO05D008374 1.6e-126 457.2 518 48.6
arahy.Tifrunner.gnm1.ann1.1X400K Arachis hypogaea HOM05D001674 ORTHO05D008374 4.7e-126 455.7 447 53.7
Lj1g0003467 Lotus japonicus HOM05D001674 ORTHO05D008374 6.1e-126 455.3 494 49.2
arahy.Tifrunner.gnm1.ann1.D3EHI2 Arachis hypogaea HOM05D001674 ORTHO05D008374 1.0e-125 454.5 447 53.7
CSS0007026 Camellia sinensis var. sinensis HOM05D001674 ORTHO05D008374 2.3e-125 453.4 565 48.1
HanXRQChr14g0426861 Helianthus annuus HOM05D001674 ORTHO05D008374 8.8e-125 451.4 344 64.5
Psat5g198440 Pisum sativum HOM05D001674 ORTHO05D008374 8.8e-125 451.4 496 49.2
Manes.06G087800 Manihot esculenta HOM05D001674 ORTHO05D008374 3.3e-124 449.5 421 55.3
RcHm_v2.0_Chr7g0182391 Rosa chinensis HOM05D001674 ORTHO05D008374 5.7e-124 448.7 361 62.6
Oeu032214.1 Olea europaea HOM05D001674 ORTHO05D008374 7.4e-124 448.4 349 64.8
TPR.G12256 Trifolium pratense HOM05D001674 ORTHO05D008374 1.3e-123 447.6 498 49.0
Nitab4.5_0002881g0060 Nicotiana tabacum HOM05D001674 ORTHO05D008374 3.7e-123 446.0 416 57.0
Gorai.003G100200 Gossypium raimondii HOM05D001674 ORTHO05D008374 4.8e-123 445.7 468 51.1
FvH4_5g14341 Fragaria vesca HOM05D001674 ORTHO05D008374 6.3e-123 445.3 469 52.0
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 6.3e-123 445.3 469 52.0
Ciclev10018579m.g Citrus clementina HOM05D001674 ORTHO05D008374 1.1e-122 444.5 347 62.5
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 1.4e-122 444.1 469 51.8
Gohir.D03G095500 Gossypium hirsutum HOM05D001674 ORTHO05D008374 2.4e-122 443.4 468 51.1
Nitab4.5_0004511g0090 Nicotiana tabacum HOM05D001674 ORTHO05D008374 5.3e-122 442.2 355 61.7
PGR083G1883 Punica granatum HOM05D001674 ORTHO05D008374 5.3e-122 442.2 387 56.3
Potri.012G067000 Populus trichocarpa HOM05D001674 ORTHO05D008374 9.1e-122 441.4 405 56.8
Sed0002195 Sechium edule HOM05D001674 ORTHO05D008374 2.6e-121 439.9 394 57.1
Lsat_1_v5_gn_5_21720 Lactuca sativa HOM05D001674 ORTHO05D008374 5.9e-121 438.7 485 50.1
Sopen03g034520 Solanum pennellii HOM05D001674 ORTHO05D008374 1.3e-120 437.6 503 48.3
CAN.G479.34 Capsicum annuum HOM05D001674 ORTHO05D008374 2.9e-120 436.4 355 61.7
ClCG06G015870 Citrullus lanatus HOM05D001674 ORTHO05D008374 3.8e-120 436.0 524 47.5
Migut.D01671 Erythranthe guttata HOM05D001674 ORTHO05D008374 5.0e-120 435.6 348 61.2
MELO3C017204.2 Cucumis melo HOM05D001674 ORTHO05D008374 1.1e-119 434.5 517 48.2
Sabra12G0048100 Salix brachista HOM05D001674 ORTHO05D008374 2.5e-119 433.3 404 55.9
Eucgr.B00565 Eucalyptus grandis HOM05D001674 ORTHO05D008374 7.2e-119 431.8 409 53.1
Phvul.009G190731 Phaseolus vulgaris HOM05D001674 ORTHO05D008374 7.2e-119 431.8 484 49.4
Peaxi162Scf00201g00024 Petunia axillaris HOM05D001674 ORTHO05D008374 1.6e-118 430.6 394 56.6
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 2.7e-118 429.9 573 44.7
Nn4g23350 Nelumbo nucifera HOM05D001674 ORTHO05D008374 1.0e-117 427.9 361 59.3
CsaV3_1G002690 Cucumis sativus L. HOM05D001674 ORTHO05D008374 3.9e-117 426.0 518 47.5
MSTRG.9601 Avicennia marina HOM05D001674 ORTHO05D008374 8.8e-117 424.9 395 55.2
SalBow7G3861 Salvia bowleyana HOM05D001674 ORTHO05D008374 3.3e-116 422.9 422 51.7
AT5G07810 Arabidopsis thaliana HOM05D001674 ORTHO05D008374 7.4e-116 421.8 352 59.7
AL6G18150 Arabidopsis lyrata HOM05D001674 ORTHO05D008374 1.7e-115 420.6 352 59.1
SGA_v2.0_scaffold65G22108 Striga asiatica HOM05D001674 ORTHO05D008374 4.8e-115 419.1 377 55.7
THA.LOC104818327 Tarenaya hassleriana HOM05D001674 ORTHO05D008374 1.8e-114 417.2 352 59.9
BraA03t09697Z Brassica rapa HOM05D001674 ORTHO05D008374 3.1e-114 416.4 352 58.8
Os07g0598300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008374 3.1e-114 416.4 340 59.7
Thhalv10012481m.g Eutrema salsugineum HOM05D001674 ORTHO05D008374 4.1e-114 416.0 349 59.3
BolC3t12927H Brassica oleracea HOM05D001674 ORTHO05D008374 7.0e-114 415.2 352 58.8
PSO017G4168 Papaver somniferum HOM05D001674 ORTHO05D008374 9.1e-114 414.8 396 52.0
A03p03470 Brassica napus HOM05D001674 ORTHO05D008374 1.2e-113 414.5 352 58.8
C03p03890 Brassica napus HOM05D001674 ORTHO05D008374 4.5e-113 412.5 352 57.7
Sp6g35120 Schrenkiella parvula HOM05D001674 ORTHO05D008374 1.0e-112 411.4 350 58.9
ATR0064G032 Amborella trichopoda HOM05D001674 ORTHO05D008374 1.3e-112 411.0 433 49.4
Carub.0006s0673 Capsella rubella HOM05D001674 ORTHO05D008374 1.7e-112 410.6 352 58.0
vmacro17585 Vaccinium macrocarpon HOM05D001674 ORTHO05D008374 7.2e-111 405.2 544 45.8
VMungo1309G0587 Vigna mungo HOM05D000002 ORTHO05D000001 2.7e-110 403.3 436 50.2
Aa31LG3G18650 Aethionema arabicum HOM05D001674 ORTHO05D008374 4.7e-110 402.5 366 56.6
unitig_0.g12 Utricularia gibba HOM05D001674 ORTHO05D008374 3.4e-108 396.4 395 52.2
Zm00001eb326710 Zea mays HOM05D001674 ORTHO05D008374 1.3e-107 394.4 343 57.1
Rhsim08G0149800 Rhododendron simsii HOM05D000001 ORTHO05D008374 4.5e-105 386.0 374 55.1
Sc12g0006560 Simmondsia chinensis HOM05D001674 ORTHO05D008374 1.7e-104 384.0 343 57.4
Aqoxy3G00457 Aquilegia oxysepala HOM05D001674 ORTHO05D008374 3.8e-104 382.9 462 47.6
Gohir.A03G069032 Gossypium hirsutum HOM05D001674 ORTHO05D008374 1.5e-103 380.9 465 46.7
EL10Ac5g11090 Beta vulgaris HOM05D001674 ORTHO05D008374 1.6e-97 360.9 334 55.7
Hund09848 Selenicereus undatus HOM05D001674 ORTHO05D008374 1.0e-96 358.2 339 55.5
SEGI_38041 Sequoiadendron giganteum HOM05D001674 ORTHO05D008374 9.5e-95 351.7 342 52.3
AUR62008488 Chenopodium quinoa HOM05D001674 ORTHO05D008374 1.6e-94 350.9 399 48.9
Ah.11g048050 Amaranthus hybridus HOM05D001674 ORTHO05D008374 2.8e-94 350.1 357 52.7
AUR62021607 Chenopodium quinoa HOM05D001674 ORTHO05D008374 1.6e-81 307.8 400 45.5
AagrBONN_evm.TU.Sc2ySwM_117.3709 Anthoceros agrestis HOM05D001674 ORTHO05D008374 4.6e-81 306.2 465 40.9
HPP92_013436 Vanilla planifolia HOM05D001674 ORTHO05D008374 8.1e-78 295.4 349 48.7
SMO358G0589 Selaginella moellendorffii HOM05D001674 ORTHO05D008374 1.4e-74 284.6 347 43.5
Pp3c1_13300 Physcomitrium patens HOM05D001674 ORTHO05D008374 4.6e-73 279.6 362 40.6
Pp3c1_13308 Physcomitrium patens HOM05D001674 ORTHO05D008374 4.6e-73 279.6 362 40.6
Cc00_g14910 Coffea canephora HOM05D001674 ORTHO05D008374 1.1e-45 188.7 190 53.2
CBR_g49703 Chara braunii HOM05D001674 ORTHO05D008374 2.1e-41 174.5 263 39.5
Cc00_g14900 Coffea canephora HOM05D001674 ORTHO05D008374 2.3e-40 171.0 213 44.1
PRCOL_00003770 Prasinoderma coloniale HOM05D001674 ORTHO05D008374 8.4e-35 152.5 403 29.5
SHI26980 Sapria himalayana HOM05D001674 ORTHO05D008374 1.7e-27 128.3 334 29.6
Ca_13626_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008374 8.7e-24 115.9 224 34.4
MCO15G340 Micromonas commoda HOM05D001674 ORTHO05D008374 3.1e-13 80.9 241 28.6
Cre12.g494200 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008374 4.2e-10 70.5 105 41.9
PGSC0003DMG400024655 Solanum tuberosum HOM05D001674 ORTHO05D008374 4.7e-09 67.0 55 58.2
VMungo1309G2646 Vigna mungo HOM05D001674 ORTHO05D008374 6.1e-09 66.6 47 66.0


User provided reference genes

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