Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A448G34 Lonicera japonica HOM05D001734 ORTHO05D003483 9.8e-275 949.5 479 100.0
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 9.4e-217 756.9 478 79.9
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 1.6e-195 686.4 477 72.7
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 2.7e-192 675.6 478 72.2
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 6.8e-191 671.0 476 73.3
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 1.2e-190 670.2 478 72.0
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 1.5e-190 669.8 523 67.7
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 6.3e-189 664.5 478 70.3
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 1.5e-185 653.3 478 70.1
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 2.5e-185 652.5 477 70.4
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 7.2e-185 651.0 478 69.7
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 1.2e-182 643.7 477 69.8
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 2.6e-182 642.5 478 68.8
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 3.4e-182 642.1 478 69.5
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 2.2e-181 639.4 478 68.0
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 6.3e-181 637.9 477 68.6
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 1.2e-179 633.6 478 67.2
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 5.9e-179 631.3 478 66.7
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 7.7e-179 630.9 478 66.7
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 7.7e-179 630.9 477 68.8
Solyc03g112950.4 Solanum lycopersicum HOM05D001734 ORTHO05D003483 1.7e-178 629.8 477 68.6
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 2.3e-178 629.4 477 67.9
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 7.2e-177 624.4 476 67.0
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 1.2e-176 623.6 478 67.8
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 1.2e-176 623.6 490 66.7
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 2.1e-176 622.9 518 62.7
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 2.8e-176 622.5 473 67.0
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 3.6e-176 622.1 479 67.2
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 2.3e-175 619.4 473 66.4
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 2.3e-175 619.4 474 67.7
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 4.0e-175 618.6 478 68.0
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.0e-174 616.3 499 64.7
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 9.8e-174 614.0 473 66.0
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 1.7e-173 613.2 475 67.2
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 1.1e-172 610.5 473 65.5
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 1.4e-172 610.1 476 66.6
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 1.0e-170 604.0 474 65.0
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 1.7e-170 603.2 478 65.7
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 2.9e-170 602.4 478 61.9
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 5.0e-170 601.7 470 65.3
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 1.9e-169 599.7 505 62.0
FAN20G1266 Fragaria x ananassa HOM05D001734 ORTHO05D003483 4.3e-169 598.6 476 66.6
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 3.6e-168 595.5 478 62.8
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 8.0e-168 594.3 478 63.8
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 8.0e-168 594.3 476 64.7
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 8.9e-167 590.9 477 65.2
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 1.3e-165 587.0 478 64.0
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 2.2e-165 586.3 480 64.0
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 2.9e-165 585.9 477 62.5
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 1.9e-164 583.2 478 63.6
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 4.1e-164 582.0 478 63.6
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 2.7e-163 579.3 478 63.0
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 2.3e-162 576.2 472 62.3
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 8.6e-162 574.3 480 62.5
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 3.4e-158 562.4 478 60.7
Hund02744 Selenicereus undatus HOM05D001734 ORTHO05D003483 4.4e-158 562.0 535 56.3
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 7.5e-158 561.2 478 61.1
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 2.4e-156 556.2 493 59.4
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 4.1e-156 555.4 484 60.1
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 9.2e-156 554.3 477 62.5
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 8.6e-154 547.7 477 60.4
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.5e-153 547.0 508 59.1
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 3.3e-153 545.8 473 60.7
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 2.1e-152 543.1 477 61.6
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 4.1e-148 528.9 472 57.2
unitig_0.g1441 Utricularia gibba HOM05D001734 ORTHO05D003483 4.6e-147 525.4 495 55.8
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 2.1e-144 516.5 474 56.3
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 3.6e-144 515.8 472 56.1
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 1.2e-142 510.8 472 56.1
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 9.9e-142 507.7 472 55.9
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 9.9e-142 507.7 505 51.3
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 1.4e-140 503.8 498 54.8
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 1.4e-140 503.8 476 58.8
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 1.5e-137 493.8 528 49.2
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 1.5e-137 493.8 523 49.9
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 5.6e-137 491.9 477 54.9
TPR.G6034 Trifolium pratense HOM05D001734 ORTHO05D003483 4.9e-133 478.8 479 54.1
HPP92_004868 Vanilla planifolia HOM05D001734 ORTHO05D003483 3.1e-127 459.5 471 52.2
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 5.3e-127 458.8 472 49.6
FAN20G1174 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.0e-126 456.8 397 63.2
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 5.5e-124 448.7 478 54.4
BraA06t25687Z Brassica rapa HOM05D001734 ORTHO05D003483 1.0e-122 444.5 413 52.8
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 1.5e-110 404.1 348 62.4
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 2.0e-110 403.7 471 46.5
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 2.0e-110 403.7 473 45.9
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 1.4e-103 380.9 471 46.9
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 1.8e-98 364.0 482 43.6
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 1.1e-97 361.3 483 40.6
Cpa.g.sc76.54 Carica papaya HOM05D001734 ORTHO05D003483 6.5e-93 345.5 263 68.4
ATR0730G231 Amborella trichopoda HOM05D001734 ORTHO05D003483 4.7e-91 339.3 340 52.9
VMungo1309G0494 Vigna mungo HOM05D001734 ORTHO05D003483 1.7e-85 320.9 260 63.5
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 1.2e-83 314.7 462 39.2
CBR_g292 Chara braunii HOM05D001734 ORTHO05D003483 1.5e-76 291.2 513 34.1
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 2.2e-72 277.3 302 49.3
Cpa.g.sc76.53 Carica papaya HOM05D001734 ORTHO05D003483 7.7e-70 268.9 217 62.7
FAN05G4580 Fragaria x ananassa HOM05D001734 ORTHO05D003483 5.5e-68 262.7 223 60.1
VMungo1309G1151 Vigna mungo HOM05D001734 ORTHO05D003483 1.0e-66 258.5 221 59.3
vmacro19388 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 1.6e-46 191.4 177 59.3
SMO298G0008 Selaginella moellendorffii HOM05D001734 ORTHO05D003483 8.9e-42 175.6 201 45.3
SHI16993 Sapria himalayana HOM05D001734 ORTHO05D003483 9.2e-39 165.6 150 60.0
ATR0730G152 Amborella trichopoda HOM05D001734 ORTHO05D003483 2.8e-35 154.1 148 56.1
SHI16994 Sapria himalayana HOM05D001734 ORTHO05D003483 1.5e-28 131.7 84 76.2
arahy.Tifrunner.gnm1.ann1.VRLT2G Arachis hypogaea HOM05D000411 ORTHO05D003483 1.5e-25 121.7 87 66.7
SEGI_27751 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 2.6e-25 120.9 76 68.4
BcaNung07276 Brassica carinata HOM05D001734 ORTHO05D003483 8.1e-19 99.4 65 69.2
Rhsim02G0154200 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.5e-17 93.6 73 67.1
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 1.2e-14 85.5 58 70.7
MBI10_g06737_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D003483 2.3e-13 81.3 51 68.6
CSS0043056 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 5.1e-13 80.1 51 76.5
Lsat_1_v5_gn_2_130860 Lactuca sativa HOM05D004109 ORTHO05D019780 4.5e-09 67.0 34 85.3
QL05p026262 Quercus lobata HOM05D001734 ORTHO05D003483 4.9e-08 63.5 80 46.2
Rhsim02G0102500 Rhododendron simsii HOM05D001734 ORTHO05D003483 3.2e-07 60.8 35 74.3
SHI16999 Sapria himalayana HOM05D001734 ORTHO05D003483 3.2e-07 60.8 46 52.2
CSS0000775 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D033929 1.2e-06 58.9 41 65.9
Pp3c6_3460 Physcomitrium patens HOM05D001734 ORTHO05D006943 4.6e-06 57.0 207 25.1


User provided reference genes

Program Settings