Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A622G13 Lonicera japonica HOM05D004601 ORTHO05D005806 1.2e-104 383.6 263 100.0
Prupe.1G074600 Prunus persica HOM05D004601 ORTHO05D005806 2.8e-21 106.7 308 31.5
CSS0021444 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 6.9e-20 102.1 314 30.6
MD16G1247900 Malus domestica HOM05D004601 ORTHO05D005806 2.2e-18 97.1 321 30.5
Rhsim03G0267200 Rhododendron simsii HOM05D004601 ORTHO05D005806 8.4e-18 95.1 308 30.8
ECA236G2032 Erigeron canadensis HOM05D004601 ORTHO05D005806 2.4e-17 93.6 250 34.4
ECA236G0938 Erigeron canadensis HOM05D004601 ORTHO05D005806 4.2e-17 92.8 278 30.6
Actinidia02499 Actinidia chinensis HOM05D004601 ORTHO05D005806 9.3e-17 91.7 313 28.4
Dinv25455 Davidia involucrata HOM05D004601 ORTHO05D005806 2.1e-16 90.5 345 29.3
Hma1.2p1_0235F.1_g098690 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 2.1e-16 90.5 148 44.6
Atru.chr7.956 Acer truncatum HOM05D004601 ORTHO05D005806 3.5e-16 89.7 309 28.2
vmacro05994 Vaccinium macrocarpon HOM05D004601 ORTHO05D005806 1.0e-15 88.2 298 30.2
TWI63G1718 Tripterygium wilfordii HOM05D004601 ORTHO05D005806 3.0e-15 86.7 317 28.4
Cc06_g20790 Coffea canephora HOM05D004601 ORTHO05D005806 2.1e-13 80.5 310 28.7
CiPaw.08G032200 Carya illinoinensis HOM05D004601 ORTHO05D005806 1.1e-12 78.2 306 29.4
SalBow6G1386 Salvia bowleyana HOM05D004601 ORTHO05D005806 1.1e-12 78.2 157 35.7
FAN17G2239 Fragaria x ananassa HOM05D004601 ORTHO05D005806 4.0e-12 76.3 329 28.9
Duzib150G1331 Durio zibethinus HOM05D004601 ORTHO05D005806 5.3e-12 75.9 319 25.4
FvH4_4g07160 Fragaria vesca HOM05D004601 ORTHO05D005806 5.3e-12 75.9 327 28.7
Migut.J00793 Erythranthe guttata HOM05D004601 ORTHO05D005806 6.9e-12 75.5 222 31.5
Cpa.g.sc95.10 Carica papaya HOM05D004601 ORTHO05D005806 1.5e-11 74.3 253 28.9
HanXRQChr05g0141031 Helianthus annuus HOM05D004601 ORTHO05D005806 2.6e-11 73.6 251 28.3
Cfa013456 Carpinus fangiana HOM05D004601 ORTHO05D005806 3.4e-11 73.2 320 26.6
RcHm_v2.0_Chr4g0399311 Rosa chinensis HOM05D004601 ORTHO05D005806 3.4e-11 73.2 335 32.5
Glyma.15G166700 Glycine max HOM05D004601 ORTHO05D005806 4.5e-11 72.8 314 24.5
HPP92_021964 Vanilla planifolia HOM05D004601 ORTHO05D005806 5.8e-11 72.4 258 26.4
Ciclev10007283m.g Citrus clementina HOM05D004601 ORTHO05D005806 7.6e-11 72.0 320 24.4
FAN22G2150 Fragaria x ananassa HOM05D004601 ORTHO05D005806 1.3e-10 71.2 77 48.1
FAN12G1367 Fragaria x ananassa HOM05D004601 ORTHO05D005806 2.2e-10 70.5 327 28.1
Phvul.009G235800 Phaseolus vulgaris HOM05D004601 ORTHO05D005806 2.9e-10 70.1 325 25.8
Gohir.A13G208300 Gossypium hirsutum HOM05D004601 ORTHO05D005806 1.1e-09 68.2 321 25.2
Lj6g0004756 Lotus japonicus HOM05D004601 ORTHO05D005806 1.4e-09 67.8 83 39.8
Lalb_Chr08g0231931 Lupinus albus HOM05D004601 ORTHO05D005806 1.9e-09 67.4 307 24.4
Potri.018G141900 Populus trichocarpa HOM05D004601 ORTHO05D005806 1.9e-09 67.4 104 41.3
Sc16g0011160 Simmondsia chinensis HOM05D004601 ORTHO05D005806 1.9e-09 67.4 294 26.9
Ca_02111_v3 Cicer arietinum L. HOM05D004601 ORTHO05D005806 2.4e-09 67.0 335 24.8
PGR142G2375 Punica granatum HOM05D004601 ORTHO05D005806 2.4e-09 67.0 314 23.9
VMungo1309G1314 Vigna mungo HOM05D004601 ORTHO05D005806 2.4e-09 67.0 307 24.4
PGR142G4125 Punica granatum HOM05D004601 ORTHO05D005806 3.2e-09 66.6 316 24.1
AUR62039835 Chenopodium quinoa HOM05D004601 ORTHO05D005806 4.2e-09 66.2 212 29.2
MSTRG.5939 Avicennia marina HOM05D004601 ORTHO05D005806 5.5e-09 65.9 94 43.6
GSVIVG01029314001 Vitis vinifera HOM05D004601 ORTHO05D005806 9.3e-09 65.1 321 27.1
AUR62000175 Chenopodium quinoa HOM05D004601 ORTHO05D005806 1.2e-08 64.7 178 27.5
Gorai.013G243100 Gossypium raimondii HOM05D004601 ORTHO05D005806 1.2e-08 64.7 312 24.7
EL10Ac4g10170 Beta vulgaris HOM05D004601 ORTHO05D005806 1.6e-08 64.3 157 33.8
Aqoxy7G02847 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 3.5e-08 63.2 335 32.8
CANSAT11G0507 Cannabis sativa HOM05D004601 ORTHO05D005806 3.5e-08 63.2 181 28.7
Eucgr.C00108 Eucalyptus grandis HOM05D004601 ORTHO05D005806 3.5e-08 63.2 302 28.5
PSO063G2966 Papaver somniferum HOM05D004601 ORTHO05D005806 7.9e-08 62.0 91 41.8
CDE07G0894 Ceratophyllum demersum HOM05D004601 ORTHO05D005806 1.3e-07 61.2 287 25.1
SGA_v2.0_scaffold112G31593 Striga asiatica HOM05D004601 ORTHO05D005806 3.0e-07 60.1 83 43.4
arahy.Tifrunner.gnm1.ann1.BQ8TF8 Arachis hypogaea HOM05D004601 ORTHO05D005806 5.1e-07 59.3 93 35.5
Lsat_1_v5_gn_8_69120 Lactuca sativa HOM05D004601 ORTHO05D005806 5.1e-07 59.3 297 27.3
TPR.G7576 Trifolium pratense HOM05D004601 ORTHO05D000001 5.1e-07 59.3 97 38.1
Solyc07g018000.3 Solanum lycopersicum HOM05D004601 ORTHO05D005806 6.7e-07 58.9 54 50.0
Sabra18G0116000 Salix brachista HOM05D004601 ORTHO05D005806 1.1e-06 58.2 99 36.4
Gohir.D13G212700 Gossypium hirsutum HOM05D004601 ORTHO05D005806 1.5e-06 57.8 99 36.4
Aqoxy295s002 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 2.5e-06 57.0 94 43.6
Glyma.09G060132 Glycine max HOM05D004601 ORTHO05D005806 2.5e-06 57.0 48 50.0
Sopen07g006920 Solanum pennellii HOM05D004601 ORTHO05D005806 2.5e-06 57.0 101 36.6
arahy.Tifrunner.gnm1.ann1.LL4FRQ Arachis hypogaea HOM05D004601 ORTHO05D005806 3.3e-06 56.6 87 35.6
Nitab4.5_0000056g0060 Nicotiana tabacum HOM05D004601 ORTHO05D005806 3.3e-06 56.6 113 31.9
CAN.G285.4 Capsicum annuum HOM05D004601 ORTHO05D005806 4.3e-06 56.2 52 50.0
A10p14520 Brassica napus HOM05D004601 ORTHO05D005806 5.6e-06 55.8 59 47.5
Psat1g144400 Pisum sativum HOM05D004601 ORTHO05D005806 5.6e-06 55.8 52 50.0
Thecc.09G186600 Theobroma cacao HOM05D004601 ORTHO05D005806 5.6e-06 55.8 333 25.2
Zm00001eb071490 Zea mays HOM05D004601 ORTHO05D005806 5.6e-06 55.8 102 36.3
AL8G33090 Arabidopsis lyrata HOM05D004601 ORTHO05D005806 7.4e-06 55.5 59 45.8
AT5G57160 Arabidopsis thaliana HOM05D004601 ORTHO05D005806 7.4e-06 55.5 62 43.5
BolC9t57749H Brassica oleracea HOM05D004601 ORTHO05D005806 7.4e-06 55.5 59 49.2
PSO170G3696 Papaver somniferum HOM05D004601 ORTHO05D005806 9.6e-06 55.1 91 38.5


User provided reference genes

Program Settings