Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A267T38 Lonicera japonica HOM05D000688 ORTHO05D017857 2.9e-113 411.8 189 100.0
Dinv32011 Davidia involucrata HOM05D000688 ORTHO05D005697 2.4e-30 136.3 75 81.3
CSS0007151 Camellia sinensis var. sinensis HOM05D000688 ORTHO05D005697 4.5e-29 132.1 75 77.3
CSS0026386 Camellia sinensis var. sinensis HOM05D000688 ORTHO05D005697 4.5e-29 132.1 75 77.3
Glyma.13G192600 Glycine max HOM05D000688 ORTHO05D005697 1.3e-28 130.6 75 74.7
Solyc01g086710.4 Solanum lycopersicum HOM05D000688 ORTHO05D005697 1.3e-28 130.6 76 80.3
Sopen01g033710 Solanum pennellii HOM05D000688 ORTHO05D005697 1.7e-28 130.2 76 78.9
vmacro13766 Vaccinium macrocarpon HOM05D000688 ORTHO05D005697 2.9e-28 129.4 75 74.7
Nitab4.5_0001542g0120 Nicotiana tabacum HOM05D000688 ORTHO05D005697 3.8e-28 129.0 76 77.6
Glyma.17G183400 Glycine max HOM05D000688 ORTHO05D005697 4.9e-28 128.6 75 72.0
Phvul.011G201300 Phaseolus vulgaris HOM05D000688 ORTHO05D005697 6.4e-28 128.3 75 74.7
Cc11_g03150 Coffea canephora HOM05D000688 ORTHO05D005697 1.9e-27 126.7 75 76.0
GSVIVG01036642001 Vitis vinifera HOM05D000688 ORTHO05D005697 1.9e-27 126.7 75 76.0
CAN.G1393.16 Capsicum annuum HOM05D000688 ORTHO05D005697 2.4e-27 126.3 76 76.3
HanXRQChr04g0119011 Helianthus annuus HOM05D000688 ORTHO05D005697 2.4e-27 126.3 76 75.0
PGR031G2571 Punica granatum HOM05D000688 ORTHO05D005697 2.4e-27 126.3 75 76.0
TAR633G0469 Trochodendron aralioides HOM05D000688 ORTHO05D005697 3.2e-27 125.9 75 72.0
Hma1.2p1_1796F.1_g302740 Hydrangea macrophylla HOM05D000688 ORTHO05D005697 4.2e-27 125.6 75 73.3
Peaxi162Scf00058g00317 Petunia axillaris HOM05D000688 ORTHO05D005697 5.4e-27 125.2 76 75.0
Lj3g0023740 Lotus japonicus HOM05D000688 ORTHO05D005697 1.2e-26 124.0 75 72.0
Nn1g02628 Nelumbo nucifera HOM05D000688 ORTHO05D005697 2.1e-26 123.2 73 72.6
ClCG08G010800 Citrullus lanatus HOM05D000688 ORTHO05D005697 3.5e-26 122.5 73 69.9
MELO3C011383.2 Cucumis melo HOM05D000688 ORTHO05D005697 3.5e-26 122.5 73 71.2
CsaV3_6G035750 Cucumis sativus L. HOM05D000688 ORTHO05D005697 3.5e-26 122.5 73 71.2
Sed0023837 Sechium edule HOM05D000688 ORTHO05D005697 6.0e-26 121.7 73 69.9
Ca_00571_v3 Cicer arietinum L. HOM05D000688 ORTHO05D005697 2.3e-25 119.8 71 69.0
Cpa.g.sc169.38 Carica papaya HOM05D000688 ORTHO05D005697 3.9e-25 119.0 67 77.6
AUR62015017 Chenopodium quinoa HOM05D000688 ORTHO05D005697 6.7e-25 118.2 75 69.3
AUR62029096 Chenopodium quinoa HOM05D000688 ORTHO05D005697 8.7e-25 117.9 75 68.0
Rhsim07G0068800 Rhododendron simsii HOM05D000688 ORTHO05D005697 1.1e-24 117.5 76 68.4
VMungo1127G0141 Vigna mungo HOM05D000688 ORTHO05D005697 1.9e-24 116.7 66 75.8
Potri.001G030750 Populus trichocarpa HOM05D000688 ORTHO05D005697 2.5e-24 116.3 71 70.4
Sc10g0004560 Simmondsia chinensis HOM05D000688 ORTHO05D005697 2.5e-24 116.3 75 68.0
CANSAT01G0672 Cannabis sativa HOM05D000688 ORTHO05D005697 3.3e-24 115.9 76 67.1
Thecc.10G143000 Theobroma cacao HOM05D000688 ORTHO05D005697 7.4e-24 114.8 72 70.8
Prupe.1G574600 Prunus persica HOM05D000688 ORTHO05D005697 9.6e-24 114.4 71 69.0
QL04p021099 Quercus lobata HOM05D000688 ORTHO05D005697 9.6e-24 114.4 73 67.1
QL93p0049_0007 Quercus lobata HOM05D000688 ORTHO05D005697 9.6e-24 114.4 73 67.1
AT1G29940 Arabidopsis thaliana HOM05D000688 ORTHO05D005697 1.3e-23 114.0 147 42.9
Sabra01G0022100 Salix brachista HOM05D000688 ORTHO05D005697 1.3e-23 114.0 71 69.0
Lsat_1_v5_gn_7_31561 Lactuca sativa HOM05D000688 ORTHO05D005697 2.1e-23 113.2 69 75.4
SGA_v2.0_scaffold260G45868 Striga asiatica HOM05D000688 ORTHO05D005697 2.1e-23 113.2 74 68.9
Medtr4g124030 Medicago truncatula HOM05D000688 ORTHO05D005697 2.8e-23 112.8 89 57.3
COL.COLO4_20729 Corchorus olitorius HOM05D000688 ORTHO05D005697 4.8e-23 112.1 72 69.4
Sp1g25790 Schrenkiella parvula HOM05D000688 ORTHO05D005697 4.8e-23 112.1 73 65.8
ECA236G4343 Erigeron canadensis HOM05D000688 ORTHO05D005697 6.2e-23 111.7 72 70.8
THA.LOC104799325 Tarenaya hassleriana HOM05D000688 ORTHO05D005697 6.2e-23 111.7 73 65.8
AL1G43780 Arabidopsis lyrata HOM05D000688 ORTHO05D005697 8.1e-23 111.3 73 64.4
Hund15749 Selenicereus undatus HOM05D000688 ORTHO05D017857 8.1e-23 111.3 71 66.2
Carub.0001s2816 Capsella rubella HOM05D000688 ORTHO05D005697 1.4e-22 110.5 73 64.4
CARHR029500 Cardamine hirsuta HOM05D000688 ORTHO05D005697 1.4e-22 110.5 73 63.0
CiPaw.06G056500 Carya illinoinensis HOM05D000688 ORTHO05D005697 2.4e-22 109.8 75 62.7
Manes.04G156600 Manihot esculenta HOM05D000688 ORTHO05D005697 3.1e-22 109.4 74 64.9
Duzib106G0283 Durio zibethinus HOM05D000688 ORTHO05D005697 4.0e-22 109.0 72 68.1
TPR.G8542 Trifolium pratense HOM05D000688 ORTHO05D005697 4.0e-22 109.0 75 64.0
FAN18G2219 Fragaria x ananassa HOM05D000688 ORTHO05D005697 5.3e-22 108.6 73 68.5
Eucgr.G03213 Eucalyptus grandis HOM05D000688 ORTHO05D005697 6.9e-22 108.2 74 64.9
Thhalv10006600m.g Eutrema salsugineum HOM05D000688 ORTHO05D005697 9.0e-22 107.8 74 64.9
FvH4_5g25870 Fragaria vesca HOM05D000688 ORTHO05D005697 1.2e-21 107.5 73 68.5
FvH4_7g07420 Fragaria vesca HOM05D000688 ORTHO05D005697 1.2e-21 107.5 73 67.1
FAN10G3028 Fragaria x ananassa HOM05D000688 ORTHO05D005697 1.2e-21 107.5 73 67.1
MSTRG.23938 Avicennia marina HOM05D000688 ORTHO05D005697 1.5e-21 107.1 76 63.2
Oeu030631.3 Olea europaea HOM05D000688 ORTHO05D005697 2.6e-21 106.3 68 70.6
Zm00001eb044710 Zea mays HOM05D000688 ORTHO05D005697 2.6e-21 106.3 69 68.1
Lalb_Chr03g0032171 Lupinus albus HOM05D000688 ORTHO05D005697 3.4e-21 105.9 68 63.2
MD08G1237100 Malus domestica HOM05D000688 ORTHO05D005697 5.8e-21 105.1 67 67.2
TWI15G1069 Tripterygium wilfordii HOM05D000688 ORTHO05D005697 5.8e-21 105.1 77 64.9
Gohir.A10G189000 Gossypium hirsutum HOM05D000688 ORTHO05D005697 1.7e-20 103.6 72 63.9
Gohir.D10G196900 Gossypium hirsutum HOM05D000688 ORTHO05D005697 1.7e-20 103.6 72 63.9
Gorai.011G220100 Gossypium raimondii HOM05D000688 ORTHO05D005697 1.7e-20 103.6 72 63.9
PSO384G4547 Papaver somniferum HOM05D000688 ORTHO05D005697 1.7e-20 103.6 71 62.0
RcHm_v2.0_Chr1g0339591 Rosa chinensis HOM05D000688 ORTHO05D005697 1.7e-20 103.6 73 65.8
Migut.B01339 Erythranthe guttata HOM05D000688 ORTHO05D005697 2.9e-20 102.8 73 60.3
FAN10G3547 Fragaria x ananassa HOM05D000688 ORTHO05D005697 2.9e-20 102.8 75 61.3
FAN06G2747 Fragaria x ananassa HOM05D000688 ORTHO05D005697 6.4e-20 101.7 75 61.3
FAN08G1568 Fragaria x ananassa HOM05D000688 ORTHO05D005697 6.4e-20 101.7 75 61.3
arahy.Tifrunner.gnm1.ann1.078WK3 Arachis hypogaea HOM05D000688 ORTHO05D005697 8.4e-20 101.3 76 59.2
Thhalv10006599m.g Eutrema salsugineum HOM05D000688 ORTHO05D005697 4.2e-19 99.0 74 58.1
FAN13G3127 Fragaria x ananassa HOM05D000688 ORTHO05D005697 4.2e-19 99.0 66 68.2
arahy.Tifrunner.gnm1.ann1.91DTPA Arachis hypogaea HOM05D000688 ORTHO05D005697 9.3e-19 97.8 67 64.2
FAN01G1757 Fragaria x ananassa HOM05D000688 ORTHO05D005697 9.3e-19 97.8 66 66.7
PSO339G3101 Papaver somniferum HOM05D000688 ORTHO05D005697 2.1e-18 96.7 73 57.5
SHI03904 Sapria himalayana HOM05D000688 ORTHO05D005697 2.7e-18 96.3 71 59.2
A07p10140 Brassica napus HOM05D000688 ORTHO05D005697 3.5e-18 95.9 79 55.7
BcaB03g13851 Brassica carinata HOM05D000688 ORTHO05D005697 4.6e-18 95.5 82 52.4
Aqoxy2G00414 Aquilegia oxysepala HOM05D000688 ORTHO05D005697 7.9e-18 94.7 76 56.6
BcaC06g35474 Brassica carinata HOM05D000688 ORTHO05D005697 7.9e-18 94.7 79 54.4
C07p15670 Brassica napus HOM05D000688 ORTHO05D005697 7.9e-18 94.7 79 54.4
BolC7t42057H Brassica oleracea HOM05D000688 ORTHO05D005697 7.9e-18 94.7 79 54.4
Os10g0495600 Oryza sativa ssp. japonica HOM05D000688 ORTHO05D005697 7.9e-18 94.7 71 59.2
Haze_03000 Corylus avellana HOM05D000688 ORTHO05D005697 8.7e-17 91.3 69 58.0
Aa31LG10G7670 Aethionema arabicum HOM05D000688 ORTHO05D005697 1.5e-16 90.5 64 60.9
Cfa010946 Carpinus fangiana HOM05D000688 ORTHO05D005697 3.3e-16 89.4 69 55.1
Mapoly0004s0090 Marchantia polymorpha HOM05D000688 ORTHO05D005697 2.1e-15 86.7 73 49.3
HPP92_008589 Vanilla planifolia HOM05D000688 ORTHO05D017857 6.2e-15 85.1 66 56.1
DCAR_019382 Daucus carota HOM05D000688 ORTHO05D005697 1.8e-14 83.6 89 47.2
AagrBONN_evm.TU.Sc2ySwM_228.2856__2857 Anthoceros agrestis HOM05D000688 ORTHO05D005697 4.0e-14 82.4 71 50.7
Pp3c5_14880 Physcomitrium patens HOM05D000688 ORTHO05D005697 4.0e-14 82.4 73 47.9
BraA07t28807Z Brassica rapa HOM05D000688 ORTHO05D005697 5.3e-14 82.0 107 41.1
EL10Ac2g02765 Beta vulgaris HOM05D000688 ORTHO05D005697 2.6e-13 79.7 49 67.3
MBI06_g17216_MAGBIO Magnolia biondii HOM05D000688 ORTHO05D005697 2.9e-12 76.3 44 75.0
Ciclev10024768m.g Citrus clementina HOM05D000688 ORTHO05D005697 1.9e-11 73.6 56 60.7
PRCOL_00002321 Prasinoderma coloniale HOM05D000688 ORTHO05D005697 1.6e-10 70.5 71 46.5
SMO358G0395 Selaginella moellendorffii HOM05D000688 ORTHO05D005697 2.1e-10 70.1 75 44.0
Ah.10g030020 Amaranthus hybridus HOM05D000688 ORTHO05D005697 3.9e-09 65.9 40 67.5
MCO01G227 Micromonas commoda HOM05D000688 ORTHO05D005697 8.2e-07 58.2 70 38.6
MCO01G228 Micromonas commoda HOM05D000688 ORTHO05D005697 8.2e-07 58.2 70 38.6


User provided reference genes

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