Gene: TPR.G8542
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G8542
- Transcript Identifier TPR.T8829
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG7 : 26708088-26731607 : negative
Gene Family Information
- ID HOM05D000688
- #Genes/#Species 832/100
- Phylogenetic origin
- ID ORTHO05D005697
- #Genes/#Species 153/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA8829.v2
- id Tp57577_TGAC_v2_gene8542.v2
- pacid 35957295
- uniprot A0A2K3NN91
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | GOA Database | transcription, DNA-templated | |
| GO:0006351 | IEA | InterPro | transcription, DNA-templated | |
| GO:0009561 | IEA | GOA Database | megagametogenesis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IEA | GOA Database | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0032549 | IEA | GOA Database | ribonucleoside binding | |
| GO:0032549 | IEA | InterPro | ribonucleoside binding | |
| GO:0016779 | IEA | GOA Database | nucleotidyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0005829 | IEA | GOA Database | cytosol |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029472 | Retrotransposon Copia-like, N-terminal |
| IPR007644 | RNA polymerase, beta subunit, protrusion |
| IPR014724 | RNA polymerase Rpb2, OB-fold |
| IPR015712 | DNA-directed RNA polymerase, subunit 2 |
| IPR009674 | DNA-directed RNA polymerase I subunit RPA2, domain 4 |
| IPR007641 | RNA polymerase Rpb2, domain 7 |
| IPR007645 | RNA polymerase Rpb2, domain 3 |
| IPR007120 | DNA-directed RNA polymerase, subunit 2, hybrid-binding domain |
| IPR007642 | RNA polymerase Rpb2, domain 2 |
| IPR037033 | DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily |
| IPR037034 | RNA polymerase Rpb2, domain 2 superfamily |
| Mapman id | Description |
|---|---|
| 15.1.1.2 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic components.subunit 2 |