Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A766T32 Lonicera japonica HOM05D004199 ORTHO05D005905 0.0e+00 1615.5 935 100.0
CSS0043668 Camellia sinensis var. sinensis HOM05D004199 ORTHO05D005905 0.0e+00 1115.5 901 69.3
DCAR_030084 Daucus carota HOM05D004199 ORTHO05D005905 0.0e+00 1080.5 880 69.9
Dinv05796 Davidia involucrata HOM05D004199 ORTHO05D005905 2.4e-309 1065.4 859 70.5
Hma1.2p1_0399F.1_g144220 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 2.2e-307 1058.9 855 69.5
Hma1.2p1_2265F.1_g318400 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 9.1e-301 1036.9 857 68.5
Cc11_g10620 Coffea canephora HOM05D004199 ORTHO05D005905 2.5e-298 1028.9 915 65.9
Cfa018630 Carpinus fangiana HOM05D004199 ORTHO05D005905 1.0e-296 1023.5 895 66.0
Sed0023765 Sechium edule HOM05D004199 ORTHO05D005905 2.8e-294 1015.4 901 63.7
MELO3C012214.2 Cucumis melo HOM05D004199 ORTHO05D005905 1.0e-291 1006.9 907 64.4
CiPaw.16G003100 Carya illinoinensis HOM05D004199 ORTHO05D005905 1.3e-291 1006.5 866 65.7
Eucgr.K00868 Eucalyptus grandis HOM05D004199 ORTHO05D005905 5.0e-291 1004.6 902 64.2
Eucgr.G02350 Eucalyptus grandis HOM05D004199 ORTHO05D005905 1.1e-290 1003.4 917 63.2
TAR623G0314 Trochodendron aralioides HOM05D004199 ORTHO05D005905 3.3e-290 1001.9 860 66.3
CsaV3_5G033970 Cucumis sativus L. HOM05D004199 ORTHO05D005905 3.6e-289 998.4 903 62.7
MD13G1046700 Malus domestica HOM05D004199 ORTHO05D005905 1.4e-288 996.5 900 64.1
vmacro14411 Vaccinium macrocarpon HOM05D004199 ORTHO05D005905 1.8e-288 996.1 911 63.4
CANSAT56G2350 Cannabis sativa HOM05D004199 ORTHO05D005905 9.8e-287 990.3 899 64.1
SGA_v2.0_scaffold14G06820 Striga asiatica HOM05D004199 ORTHO05D005905 6.4e-286 987.6 912 61.8
Nn6g35106 Nelumbo nucifera HOM05D004199 ORTHO05D005905 7.0e-285 984.2 873 64.7
ClCG05G023030 Citrullus lanatus HOM05D004199 ORTHO05D005905 1.2e-284 983.4 884 62.6
Manes.04G160500 Manihot esculenta HOM05D004199 ORTHO05D005905 7.8e-284 980.7 881 65.0
CAN.G184.89 Capsicum annuum HOM05D004199 ORTHO05D005905 8.6e-283 977.2 895 61.9
RcHm_v2.0_Chr4g0435851 Rosa chinensis HOM05D004199 ORTHO05D005905 1.9e-282 976.1 891 64.5
Nitab4.5_0004122g0060 Nicotiana tabacum HOM05D004199 ORTHO05D005905 6.8e-280 967.6 957 58.6
ECA234G0057 Erigeron canadensis HOM05D004199 ORTHO05D005905 8.9e-280 967.2 894 62.9
Sopen05g005660 Solanum pennellii HOM05D004199 ORTHO05D005905 1.3e-278 963.4 900 61.7
Lsat_1_v5_gn_4_1641 Lactuca sativa HOM05D004199 ORTHO05D005905 3.2e-277 958.7 896 62.5
MD16G1048400 Malus domestica HOM05D004199 ORTHO05D005905 3.2e-277 958.7 895 61.5
PGSC0003DMG400000826 Solanum tuberosum HOM05D004199 ORTHO05D005905 7.1e-277 957.6 899 61.2
EL10Ac9g22638 Beta vulgaris HOM05D004199 ORTHO05D005905 2.7e-276 955.7 893 61.5
Peaxi162Scf00102g00927 Petunia axillaris HOM05D004199 ORTHO05D005905 3.5e-276 955.3 879 62.3
COL.COLO4_31201 Corchorus olitorius HOM05D004199 ORTHO05D005905 1.7e-275 953.0 901 62.0
FAN22G1977 Fragaria x ananassa HOM05D004199 ORTHO05D005905 1.9e-274 949.5 895 62.0
Rhsim03G0238800 Rhododendron simsii HOM05D004199 ORTHO05D005905 1.8e-272 943.0 942 58.7
Haze_17439 Corylus avellana HOM05D004199 ORTHO05D005905 4.0e-272 941.8 894 63.3
FvH4_4g28100 Fragaria vesca HOM05D004199 ORTHO05D005905 2.0e-271 939.5 898 61.6
FAN12G0509 Fragaria x ananassa HOM05D004199 ORTHO05D005905 5.8e-271 937.9 896 61.5
MBI01_g12859_MAGBIO Magnolia biondii HOM05D004199 ORTHO05D005905 1.3e-270 936.8 875 62.3
Ah.04g153070 Amaranthus hybridus HOM05D004199 ORTHO05D005905 1.1e-269 933.7 892 60.2
Hma1.2p1_0592F.1_g185323 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 1.4e-269 933.3 792 67.0
FAN07G1167 Fragaria x ananassa HOM05D004199 ORTHO05D005905 4.1e-269 931.8 895 61.0
Gohir.A10G057500 Gossypium hirsutum HOM05D004199 ORTHO05D005905 2.1e-268 929.5 902 60.2
TWI53G1601 Tripterygium wilfordii HOM05D004199 ORTHO05D005905 2.1e-268 929.5 837 63.1
Gohir.D10G059300 Gossypium hirsutum HOM05D004199 ORTHO05D005905 3.5e-268 928.7 904 60.2
Gorai.011G063300 Gossypium raimondii HOM05D004199 ORTHO05D005905 6.0e-268 927.9 904 60.2
Nitab4.5_0011513g0020 Nicotiana tabacum HOM05D004199 ORTHO05D005905 1.5e-266 923.3 931 58.5
FAN17G3109 Fragaria x ananassa HOM05D004199 ORTHO05D005905 2.5e-266 922.5 854 61.7
HanXRQChr17g0568011 Helianthus annuus HOM05D004199 ORTHO05D005905 4.3e-266 921.8 804 65.2
AUR62044199 Chenopodium quinoa HOM05D004199 ORTHO05D005905 9.6e-266 920.6 884 60.7
Aqoxy2G01512 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 6.2e-265 917.9 854 60.7
Psat2g189000 Pisum sativum HOM05D004199 ORTHO05D005905 2.0e-263 912.9 895 60.7
Potri.008G002600 Populus trichocarpa HOM05D004199 ORTHO05D005905 2.0e-263 912.9 889 61.2
Atru.chr6.1864_Atru.chr6.1865 Acer truncatum HOM05D004199 ORTHO05D005905 9.9e-263 910.6 840 62.0
Glyma.07G227400 Glycine max HOM05D004199 ORTHO05D005905 4.2e-261 905.2 899 60.1
Thecc.10G125100 Theobroma cacao HOM05D004199 ORTHO05D005905 2.1e-260 902.9 886 61.2
Lj3g0002767 Lotus japonicus HOM05D004199 ORTHO05D005905 1.3e-259 900.2 892 58.3
Sc17g0004690 Simmondsia chinensis HOM05D004199 ORTHO05D005905 1.1e-258 897.1 842 61.9
Ciclev10014191m.g Citrus clementina HOM05D004199 ORTHO05D005905 1.6e-257 893.3 881 60.3
Ca_25946_v3 Cicer arietinum L. HOM05D004199 ORTHO05D005905 1.1e-256 890.6 892 59.5
VMungo1383G0908 Vigna mungo HOM05D004199 ORTHO05D005905 1.4e-256 890.2 888 58.7
Glyma.20G028100 Glycine max HOM05D004199 ORTHO05D005905 2.4e-256 889.4 899 59.2
EL10Ac8g19592 Beta vulgaris HOM05D004199 ORTHO05D005905 6.9e-256 887.9 893 58.7
Phvul.001G030200 Phaseolus vulgaris HOM05D004199 ORTHO05D005905 1.7e-254 883.2 882 59.3
Sabra08G0000600 Salix brachista HOM05D004199 ORTHO05D005905 4.6e-252 875.2 929 58.3
Glyma.07G155300 Glycine max HOM05D004199 ORTHO05D005905 3.9e-251 872.1 892 58.6
PSO339G4136 Papaver somniferum HOM05D004199 ORTHO05D005905 1.5e-250 870.2 858 59.1
Prupe.1G305200 Prunus persica HOM05D004199 ORTHO05D005905 1.9e-250 869.8 904 58.4
THA.LOC104800384 Tarenaya hassleriana HOM05D004199 ORTHO05D005905 7.3e-250 867.8 889 58.3
PSO801G0529 Papaver somniferum HOM05D004199 ORTHO05D005905 2.1e-249 866.3 892 57.8
Lalb_Chr10g0099721 Lupinus albus HOM05D004199 ORTHO05D005905 4.8e-249 865.1 864 58.6
Migut.E00297 Erythranthe guttata HOM05D004199 ORTHO05D005905 2.0e-247 859.8 867 57.3
ATR0665G261 Amborella trichopoda HOM05D004199 ORTHO05D005905 1.9e-245 853.2 891 56.3
unitig_22.g6876 Utricularia gibba HOM05D004199 ORTHO05D005905 4.2e-245 852.0 920 54.9
Aa31LG3G17980 Aethionema arabicum HOM05D004199 ORTHO05D005905 1.6e-244 850.1 867 55.9
arahy.Tifrunner.gnm1.ann1.9AQU5H Arachis hypogaea HOM05D004199 ORTHO05D005905 1.6e-244 850.1 908 57.5
Medtr5g007520 Medicago truncatula HOM05D004199 ORTHO05D005905 2.5e-242 842.8 899 56.3
arahy.Tifrunner.gnm1.ann1.P5TZTU Arachis hypogaea HOM05D004199 ORTHO05D005905 1.1e-240 837.4 930 56.1
CDE05G0525 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 1.1e-237 827.4 884 55.7
Duzib235G0865 Durio zibethinus HOM05D004199 ORTHO05D005905 1.9e-237 826.6 878 57.2
CDE01G0057 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 6.7e-235 818.1 840 57.1
TPR.G37944 Trifolium pratense HOM05D004199 ORTHO05D005905 7.6e-231 804.7 747 61.2
HPP92_022758 Vanilla planifolia HOM05D004199 ORTHO05D005905 2.7e-228 796.2 885 56.0
SEGI_39962 Sequoiadendron giganteum HOM05D004199 ORTHO05D005905 1.4e-224 783.9 844 54.3
CARHR204430 Cardamine hirsuta HOM05D004199 ORTHO05D005905 1.2e-220 770.8 898 52.3
Lalb_Chr04g0254951 Lupinus albus HOM05D004199 ORTHO05D005905 7.9e-220 768.1 897 53.1
A10p28170 Brassica napus HOM05D004199 ORTHO05D005905 6.7e-219 765.0 886 52.0
BraA10t44866Z Brassica rapa HOM05D004199 ORTHO05D005905 6.7e-219 765.0 886 52.0
BcaB08g37246 Brassica carinata HOM05D004199 ORTHO05D005905 1.3e-217 760.8 901 51.2
C09p68380 Brassica napus HOM05D004199 ORTHO05D005905 1.7e-217 760.4 889 51.7
Thhalv10012615m.g Eutrema salsugineum HOM05D004199 ORTHO05D005905 6.3e-217 758.4 883 52.8
A03p03960 Brassica napus HOM05D004199 ORTHO05D005905 6.9e-216 755.0 879 52.1
Actinidia38395 Actinidia chinensis HOM05D004199 ORTHO05D005905 2.6e-215 753.1 702 61.7
Solyc05g009850.4 Solanum lycopersicum HOM05D004199 ORTHO05D005905 2.6e-215 753.1 623 64.8
BolC9t59585H Brassica oleracea HOM05D004199 ORTHO05D005905 1.3e-214 750.7 891 51.4
BraA03t09739Z Brassica rapa HOM05D004199 ORTHO05D005905 5.5e-213 745.3 883 51.6
AT5G08550 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 3.3e-210 736.1 895 50.5
AL6G19260 Arabidopsis lyrata HOM05D004199 ORTHO05D005905 4.4e-210 735.7 896 50.4
BcaB01g05585 Brassica carinata HOM05D004199 ORTHO05D005905 9.7e-210 734.6 866 52.2
Carub.0006s0751 Capsella rubella HOM05D004199 ORTHO05D005905 2.9e-206 723.0 899 49.5
Aqoxy6G00799 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 1.8e-203 713.8 843 50.3
C03p04430 Brassica napus HOM05D004199 ORTHO05D005905 8.8e-203 711.4 876 50.2
BolC3t12974H Brassica oleracea HOM05D004199 ORTHO05D005905 3.5e-199 699.5 876 49.7
Os03g0853700 Oryza sativa ssp. japonica HOM05D004199 ORTHO05D005905 1.9e-197 693.7 933 46.5
Sp6g34340 Schrenkiella parvula HOM05D004199 ORTHO05D005905 7.2e-197 691.8 857 49.0
Zm00001eb064800 Zea mays HOM05D004199 ORTHO05D005905 1.0e-190 671.4 929 45.0
AagrBONN_evm.TU.Sc2ySwM_228.4147 Anthoceros agrestis HOM05D004199 ORTHO05D005905 1.5e-181 641.0 925 44.6
Oeu041359.1 Olea europaea HOM05D004199 ORTHO05D005905 9.8e-178 628.2 479 70.4
GSVIVG01011956001 Vitis vinifera HOM05D004199 ORTHO05D005905 1.8e-176 624.0 487 67.1
Pp3c5_20240 Physcomitrium patens HOM05D004199 ORTHO05D005905 3.5e-175 619.8 859 45.9
AagrBONN_evm.TU.Sc2ySwM_368.435 Anthoceros agrestis HOM05D004199 ORTHO05D005905 4.7e-172 609.4 925 43.0
Mapoly0131s0026 Marchantia polymorpha HOM05D004199 ORTHO05D005905 2.4e-168 597.0 875 44.6
AUR62042759 Chenopodium quinoa HOM05D004199 ORTHO05D005905 1.0e-158 565.1 483 62.5
SMO259G0010 Selaginella moellendorffii HOM05D004199 ORTHO05D005905 3.3e-149 533.5 842 41.4
Rhsim01G0212500 Rhododendron simsii HOM05D004199 ORTHO05D005905 2.2e-137 494.2 554 54.2
Nitab4.5_0007631g0010 Nicotiana tabacum HOM05D004199 ORTHO05D005905 1.5e-117 428.3 482 51.7
CBR_g46838 Chara braunii HOM05D004199 ORTHO05D005905 4.8e-116 423.3 889 35.3
GSVIVG01011955001 Vitis vinifera HOM05D004199 ORTHO05D005905 7.7e-106 389.4 368 65.2
QL01p046262 Quercus lobata HOM05D004199 ORTHO05D005905 1.1e-101 375.6 389 60.4
Oeu041360.1 Olea europaea HOM05D004199 ORTHO05D005905 5.0e-97 360.1 421 56.1
AT5G09210 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 2.6e-90 337.8 327 55.4
Zm00001eb177730 Zea mays HOM05D004199 ORTHO05D005905 3.2e-88 330.9 447 45.6
Zm00001eb381810 Zea mays HOM05D004199 ORTHO05D005905 8.8e-86 322.8 457 44.2
Actinidia13675 Actinidia chinensis HOM05D004199 ORTHO05D005905 3.3e-85 320.9 377 60.2
AUR62033048 Chenopodium quinoa HOM05D004199 ORTHO05D005905 2.7e-79 301.2 398 50.8
Glyma.18G205900 Glycine max HOM05D004199 ORTHO05D005905 2.6e-77 294.7 293 54.9
Zm00001eb323900 Zea mays HOM05D004199 ORTHO05D005905 8.3e-76 289.7 481 41.2
CARHR203800 Cardamine hirsuta HOM05D004199 ORTHO05D005905 4.0e-70 270.8 263 54.8
MCO14G506 Micromonas commoda HOM05D004199 ORTHO05D005905 1.6e-63 248.8 588 30.3
Actinidia13676 Actinidia chinensis HOM05D004199 ORTHO05D005905 2.8e-63 248.1 172 71.5
Cpa.g.sc221.8 Carica papaya HOM05D004199 ORTHO05D005905 2.2e-60 238.4 332 50.9
Cre06.g269350 Chlamydomonas reinhardtii HOM05D004199 ORTHO05D005905 9.2e-59 233.0 725 29.5
EL10Ac6g14565 Beta vulgaris HOM05D004199 ORTHO05D005905 5.6e-48 197.2 168 57.7
Potri.006G020200 Populus trichocarpa HOM05D004199 ORTHO05D005905 6.6e-33 147.1 151 58.9
Potri.006G020400 Populus trichocarpa HOM05D004199 ORTHO05D005905 1.9e-32 145.6 151 58.9
EL10Ac6g13882 Beta vulgaris HOM05D004199 ORTHO05D005905 1.2e-29 136.3 125 52.8
Nitab4.5_0000520g0050 Nicotiana tabacum HOM05D004199 ORTHO05D005905 4.4e-29 134.4 207 42.0
Thecc.06G064500 Theobroma cacao HOM05D004199 ORTHO05D005905 6.9e-22 110.5 77 68.8
AagrBONN_evm.TU.Sc2ySwM_368.450 Anthoceros agrestis HOM05D004199 ORTHO05D005905 4.2e-19 101.3 86 55.8
CARHR069330 Cardamine hirsuta HOM05D004199 ORTHO05D005905 5.4e-19 100.9 83 59.0
Cpa.g.sc221.6 Carica papaya HOM05D004199 ORTHO05D005905 4.8e-15 87.8 67 71.6
COL.COLO4_28252 Corchorus olitorius HOM05D004199 ORTHO05D025158 6.2e-15 87.4 90 60.0
COL.COLO4_32069 Corchorus olitorius HOM05D004199 ORTHO05D025158 3.4e-13 81.6 90 55.6
CARHR069340 Cardamine hirsuta HOM05D004199 ORTHO05D005905 1.3e-12 79.7 82 52.4
Sabra10G0198200 Salix brachista HOM05D004199 ORTHO05D349944 1.2e-10 73.2 141 41.1
EL10Ac2g03784 Beta vulgaris HOM05D004199 ORTHO05D019838 1.3e-09 69.7 65 58.5
EL10Ac3g06366 Beta vulgaris HOM05D004199 ORTHO05D019838 1.3e-09 69.7 65 58.5
EL10Ac7g17540 Beta vulgaris HOM05D000966 ORTHO05D019838 1.5e-08 66.2 65 56.9
CARHR147400 Cardamine hirsuta HOM05D004199 ORTHO05D005905 2.5e-08 65.5 37 78.4
AagrBONN_evm.TU.Sc2ySwM_368.453 Anthoceros agrestis HOM05D030179 ORTHO05D026588 1.1e-06 60.1 47 55.3
TPR.G37907 Trifolium pratense HOM05D004199 ORTHO05D411047 1.4e-06 59.7 57 56.1
Aqoxy5G02943 Aquilegia oxysepala HOM05D004199 ORTHO05D077991 2.4e-06 58.9 38 63.2
COL.COLO4_08066 Corchorus olitorius HOM05D004199 ORTHO05D025158 6.9e-06 57.4 148 38.5


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