Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A381G13 Lonicera japonica HOM05D005045 ORTHO05D006386 1.3e-126 456.4 239 100.0
Lju912A1G33 Lonicera japonica HOM05D005045 ORTHO05D006386 2.5e-117 425.6 229 98.3
Haze_11653 Corylus avellana HOM05D005045 ORTHO05D006386 2.7e-92 342.4 235 74.9
Sc19g0007360 Simmondsia chinensis HOM05D005045 ORTHO05D006386 1.4e-91 340.1 227 76.7
Cfa014961 Carpinus fangiana HOM05D005045 ORTHO05D006386 8.8e-91 337.4 235 73.6
Actinidia28996 Actinidia chinensis HOM05D005045 ORTHO05D006386 1.5e-90 336.7 235 74.0
CSS0020032 Camellia sinensis var. sinensis HOM05D005045 ORTHO05D006386 2.0e-90 336.3 235 74.5
Eucgr.H00025 Eucalyptus grandis HOM05D005045 ORTHO05D006386 7.5e-90 334.3 235 72.3
Potri.001G320300 Populus trichocarpa HOM05D005045 ORTHO05D006386 2.8e-89 332.4 227 74.0
CiPaw.01G116800 Carya illinoinensis HOM05D005045 ORTHO05D006386 4.8e-89 331.6 235 71.9
TWI53G1845 Tripterygium wilfordii HOM05D005045 ORTHO05D006386 4.8e-89 331.6 227 73.1
Ciclev10004166m.g Citrus clementina HOM05D005045 ORTHO05D006386 9.1e-88 327.4 235 71.5
Cpa.g.sc157.48 Carica papaya HOM05D005045 ORTHO05D006386 1.6e-87 326.6 235 71.9
CsaV3_3G010730 Cucumis sativus L. HOM05D005045 ORTHO05D006386 8.6e-86 320.9 227 70.5
Sabra16G0202900 Salix brachista HOM05D005045 ORTHO05D006386 8.6e-86 320.9 252 66.7
MELO3C006292.2 Cucumis melo HOM05D005045 ORTHO05D006386 1.9e-85 319.7 227 70.5
Lalb_Chr11g0075871 Lupinus albus HOM05D005045 ORTHO05D006386 3.3e-85 318.9 230 70.9
Sed0026716 Sechium edule HOM05D005045 ORTHO05D006386 5.5e-85 318.2 227 70.5
ClCG05G003110 Citrullus lanatus HOM05D005045 ORTHO05D006386 9.5e-85 317.4 227 70.0
Cc03_g08470 Coffea canephora HOM05D005045 ORTHO05D006386 9.5e-85 317.4 234 69.2
Manes.03G144200 Manihot esculenta HOM05D005045 ORTHO05D006386 3.6e-84 315.5 235 68.9
Thecc.04G195000 Theobroma cacao HOM05D005045 ORTHO05D006386 1.2e-82 310.5 227 68.7
Phvul.001G266800 Phaseolus vulgaris HOM05D005045 ORTHO05D006386 1.5e-82 310.1 227 69.2
Duzib151G0179 Durio zibethinus HOM05D005045 ORTHO05D006386 2.0e-82 309.7 227 69.2
FAN12G2321 Fragaria x ananassa HOM05D005045 ORTHO05D006386 2.0e-82 309.7 227 68.7
Lj6g0005100 Lotus japonicus HOM05D005045 ORTHO05D006386 2.6e-82 309.3 223 68.6
FAN07G1455 Fragaria x ananassa HOM05D005045 ORTHO05D006386 4.4e-82 308.5 226 68.6
FvH4_4g13300 Fragaria vesca HOM05D005045 ORTHO05D006386 1.7e-81 306.6 226 68.6
FAN22G0494 Fragaria x ananassa HOM05D005045 ORTHO05D006386 2.2e-81 306.2 226 68.6
RcHm_v2.0_Chr4g0413591 Rosa chinensis HOM05D005045 ORTHO05D006386 2.8e-81 305.8 230 67.0
THA.LOC104826172 Tarenaya hassleriana HOM05D005045 ORTHO05D006386 8.3e-81 304.3 227 68.3
Oeu034322.3 Olea europaea HOM05D005045 ORTHO05D006386 1.8e-80 303.1 221 70.6
Glyma.18G002400 Glycine max HOM05D005045 ORTHO05D006386 3.1e-80 302.4 227 66.5
Nn3g20083 Nelumbo nucifera HOM05D005045 ORTHO05D006386 4.1e-80 302.0 235 66.4
MBI07_g27365_MAGBIO Magnolia biondii HOM05D005045 ORTHO05D006386 5.4e-80 301.6 227 66.5
MSTRG.9796 Avicennia marina HOM05D005045 ORTHO05D006386 2.7e-79 299.3 235 63.8
vmacro15566 Vaccinium macrocarpon HOM05D005045 ORTHO05D006386 3.5e-79 298.9 204 76.0
PGR142G0016 Punica granatum HOM05D005045 ORTHO05D006386 4.5e-79 298.5 235 66.4
DCAR_005488 Daucus carota HOM05D005045 ORTHO05D006386 1.0e-78 297.4 235 65.5
CDE02G0777 Ceratophyllum demersum HOM05D005045 ORTHO05D006386 2.5e-77 292.7 227 65.6
Nitab4.5_0003358g0080 Nicotiana tabacum HOM05D005045 ORTHO05D006386 4.3e-77 292.0 229 66.4
Migut.G00767 Erythranthe guttata HOM05D005045 ORTHO05D006386 2.1e-76 289.7 225 65.8
Aa31LG5G5040 Aethionema arabicum HOM05D005045 ORTHO05D006386 8.0e-76 287.7 245 63.3
Sp4g14350 Schrenkiella parvula HOM05D005045 ORTHO05D006386 1.8e-75 286.6 227 64.8
CARHR125720 Cardamine hirsuta HOM05D005045 ORTHO05D006386 4.4e-74 282.0 227 65.2
Prupe.1G165000 Prunus persica HOM05D005045 ORTHO05D006386 4.4e-74 282.0 226 62.8
BcaB01g04004 Brassica carinata HOM05D005045 ORTHO05D006386 7.5e-74 281.2 227 63.0
Carub.0004s1329 Capsella rubella HOM05D005045 ORTHO05D006386 7.5e-74 281.2 226 62.8
BcaNung07126 Brassica carinata HOM05D005045 ORTHO05D006386 2.2e-73 279.6 227 62.6
A03p17990 Brassica napus HOM05D005045 ORTHO05D006386 2.2e-73 279.6 227 62.6
C03p21030 Brassica napus HOM05D005045 ORTHO05D006386 2.2e-73 279.6 227 62.6
BolC3t14484H Brassica oleracea HOM05D005045 ORTHO05D006386 2.2e-73 279.6 227 62.6
Dinv38168 Davidia involucrata HOM05D005045 ORTHO05D006386 2.9e-73 279.3 235 63.8
BraA03t11060Z Brassica rapa HOM05D005045 ORTHO05D006386 4.9e-73 278.5 227 62.1
CAN.G765.38 Capsicum annuum HOM05D005045 ORTHO05D006386 4.9e-73 278.5 177 78.0
Gohir.A02G019100 Gossypium hirsutum HOM05D005045 ORTHO05D006386 1.1e-72 277.3 189 75.1
SGA_v2.0_scaffold27G11679 Striga asiatica HOM05D005045 ORTHO05D006386 1.4e-72 276.9 224 61.6
Aqoxy2G03932 Aquilegia oxysepala HOM05D005045 ORTHO05D006386 1.8e-72 276.6 235 60.0
Gohir.D02G022400 Gossypium hirsutum HOM05D005045 ORTHO05D006386 1.8e-72 276.6 189 75.1
Gorai.005G027800 Gossypium raimondii HOM05D005045 ORTHO05D006386 1.8e-72 276.6 189 75.1
Rhsim02G0061900 Rhododendron simsii HOM05D005045 ORTHO05D006386 4.1e-72 275.4 355 47.6
Solyc05g053800.3 Solanum lycopersicum HOM05D005045 ORTHO05D006386 7.0e-72 274.6 177 77.4
AT2G31970 Arabidopsis thaliana HOM05D005045 ORTHO05D006386 9.2e-72 274.2 226 61.5
PSO017G0058 Papaver somniferum HOM05D005045 ORTHO05D006386 9.2e-72 274.2 226 62.4
AL4G27320 Arabidopsis lyrata HOM05D005045 ORTHO05D006386 1.6e-71 273.5 227 61.7
VMungo1383G3533 Vigna mungo HOM05D005045 ORTHO05D006386 1.6e-71 273.5 184 73.9
Sopen05g032270 Solanum pennellii HOM05D005045 ORTHO05D006386 3.5e-71 272.3 177 76.8
Thhalv10016151m.g Eutrema salsugineum HOM05D005045 ORTHO05D006386 1.0e-70 270.8 227 59.9
MD05G1230300 Malus domestica HOM05D005045 ORTHO05D006386 1.3e-70 270.4 226 61.1
Lsat_1_v5_gn_6_59140 Lactuca sativa HOM05D005045 ORTHO05D006386 2.3e-70 269.6 235 60.9
ATR0561G148 Amborella trichopoda HOM05D005045 ORTHO05D006386 6.6e-70 268.1 227 59.5
ECA233G4939 Erigeron canadensis HOM05D005045 ORTHO05D006386 6.6e-70 268.1 235 60.9
Atru.chr4.1578 Acer truncatum HOM05D005045 ORTHO05D006386 1.9e-69 266.5 235 61.7
Nitab4.5_0002260g0080 Nicotiana tabacum HOM05D005045 ORTHO05D006386 2.5e-69 266.2 223 63.7
HPP92_024209 Vanilla planifolia HOM05D005045 ORTHO05D006386 2.5e-69 266.2 235 59.6
SalBow8G0828 Salvia bowleyana HOM05D005045 ORTHO05D006386 2.3e-67 259.6 221 60.6
TPR.G25379 Trifolium pratense HOM05D005045 ORTHO05D006386 4.0e-67 258.8 235 58.3
Psat5g100040 Pisum sativum HOM05D005045 ORTHO05D006386 8.9e-67 257.7 204 65.7
HanXRQChr02g0058481 Helianthus annuus HOM05D005045 ORTHO05D006386 1.2e-66 257.3 184 71.2
Peaxi162Scf00423g00410 Petunia axillaris HOM05D005045 ORTHO05D006386 6.4e-65 251.5 227 59.0
unitig_0.g1961 Utricularia gibba HOM05D005045 ORTHO05D006386 8.3e-65 251.1 227 58.1
Medtr3g084300 Medicago truncatula HOM05D005045 ORTHO05D006386 1.3e-62 243.8 192 66.1
EL10Ac3g07454 Beta vulgaris HOM05D005045 ORTHO05D006386 9.5e-61 237.7 235 54.0
Zm00001eb181120 Zea mays HOM05D005045 ORTHO05D006386 1.8e-59 233.4 224 54.0
BcaB01g04007 Brassica carinata HOM05D005045 ORTHO05D006386 1.2e-58 230.7 227 55.1
Os02g0497500 Oryza sativa ssp. japonica HOM05D005045 ORTHO05D006386 1.5e-58 230.3 224 51.3
AUR62020863 Chenopodium quinoa HOM05D005045 ORTHO05D006386 4.1e-56 222.2 227 52.4
Ca_16407_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 6.4e-49 198.4 187 56.1
Ca_16416_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 6.4e-49 198.4 187 56.1
COL.COLO4_20231 Corchorus olitorius HOM05D005045 ORTHO05D006386 6.6e-46 188.3 150 66.7
Mapoly0027s0186 Marchantia polymorpha HOM05D005045 ORTHO05D006386 1.9e-45 186.8 226 42.9
Pp3c10_3760 Physcomitrium patens HOM05D005045 ORTHO05D006386 1.2e-44 184.1 227 41.0
Ah.04g149410 Amaranthus hybridus HOM05D005045 ORTHO05D006386 2.6e-42 176.4 233 44.6
AagrBONN_evm.TU.Sc2ySwM_368.995 Anthoceros agrestis HOM05D002013 ORTHO05D002293 9.6e-37 157.9 222 38.7
SEGI_03959 Sequoiadendron giganteum HOM05D005045 ORTHO05D006386 1.5e-34 150.6 92 75.0
SMO356G0717 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 4.5e-34 149.1 178 45.5
SMO217G0009 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 3.8e-33 146.0 176 44.9
SHI26067 Sapria himalayana HOM05D005045 ORTHO05D006386 1.4e-32 144.1 114 64.9
BcaC01g05925 Brassica carinata HOM05D005045 ORTHO05D006386 1.6e-31 140.6 230 39.1
CBR_g44539 Chara braunii HOM05D005045 ORTHO05D006386 1.3e-25 120.9 227 32.2
QL10p041126 Quercus lobata HOM05D005045 ORTHO05D006386 6.9e-19 98.6 102 54.9
SHI26068 Sapria himalayana HOM05D005045 ORTHO05D000014 7.9e-15 85.1 110 43.6
VMungo0251G0925 Vigna mungo HOM05D005045 ORTHO05D005612 7.9e-15 85.1 90 55.6
VMungo0331G0368 Vigna mungo HOM05D005045 ORTHO05D006386 1.8e-14 84.0 72 61.1


User provided reference genes

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