Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A381G12 Lonicera japonica HOM05D005045 ORTHO05D006386 4.0e-94 348.2 193 100.0
Lju912A1G33 Lonicera japonica HOM05D005045 ORTHO05D006386 1.8e-62 243.0 193 71.5
Peaxi162Scf00423g00410 Petunia axillaris HOM05D005045 ORTHO05D006386 7.4e-56 221.1 192 60.9
CiPaw.01G116800 Carya illinoinensis HOM05D005045 ORTHO05D006386 4.8e-55 218.4 192 59.4
Phvul.001G266800 Phaseolus vulgaris HOM05D005045 ORTHO05D006386 4.8e-55 218.4 192 59.4
Actinidia28996 Actinidia chinensis HOM05D005045 ORTHO05D006386 8.2e-55 217.6 192 60.4
Solyc05g053800.3 Solanum lycopersicum HOM05D005045 ORTHO05D006386 2.4e-54 216.1 192 60.4
Cpa.g.sc157.48 Carica papaya HOM05D005045 ORTHO05D006386 7.0e-54 214.5 192 58.9
MELO3C006292.2 Cucumis melo HOM05D005045 ORTHO05D006386 9.1e-54 214.2 192 60.4
CsaV3_3G010730 Cucumis sativus L. HOM05D005045 ORTHO05D006386 9.1e-54 214.2 192 60.4
PGR142G0016 Punica granatum HOM05D005045 ORTHO05D006386 9.1e-54 214.2 192 59.4
Glyma.18G002400 Glycine max HOM05D005045 ORTHO05D006386 1.2e-53 213.8 192 59.4
Sopen05g032270 Solanum pennellii HOM05D005045 ORTHO05D006386 1.6e-53 213.4 192 59.4
ClCG05G003110 Citrullus lanatus HOM05D005045 ORTHO05D006386 2.0e-53 213.0 192 59.9
VMungo1383G3533 Vigna mungo HOM05D005045 ORTHO05D006386 4.5e-53 211.8 192 58.9
Ca_16407_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 7.7e-53 211.1 192 58.3
Ca_16416_v3 Cicer arietinum L. HOM05D005045 ORTHO05D006386 7.7e-53 211.1 192 58.3
Lalb_Chr11g0075871 Lupinus albus HOM05D005045 ORTHO05D006386 2.2e-52 209.5 193 58.5
CSS0020032 Camellia sinensis var. sinensis HOM05D005045 ORTHO05D006386 2.9e-52 209.1 192 57.3
Nitab4.5_0002260g0080 Nicotiana tabacum HOM05D005045 ORTHO05D006386 3.8e-52 208.8 192 56.2
Cfa014961 Carpinus fangiana HOM05D005045 ORTHO05D006386 5.0e-52 208.4 192 58.3
Haze_11653 Corylus avellana HOM05D005045 ORTHO05D006386 5.0e-52 208.4 167 64.1
THA.LOC104826172 Tarenaya hassleriana HOM05D005045 ORTHO05D006386 5.0e-52 208.4 192 57.8
TWI53G1845 Tripterygium wilfordii HOM05D005045 ORTHO05D006386 6.5e-52 208.0 192 59.4
Nitab4.5_0003358g0080 Nicotiana tabacum HOM05D005045 ORTHO05D006386 1.5e-51 206.8 192 55.7
Dinv38168 Davidia involucrata HOM05D005045 ORTHO05D006386 5.5e-51 204.9 192 58.3
CAN.G765.38 Capsicum annuum HOM05D005045 ORTHO05D006386 7.2e-51 204.5 192 58.3
Oeu034322.3 Olea europaea HOM05D005045 ORTHO05D006386 7.2e-51 204.5 192 57.3
Sp4g14350 Schrenkiella parvula HOM05D005045 ORTHO05D006386 7.2e-51 204.5 192 56.2
Aqoxy2G03932 Aquilegia oxysepala HOM05D005045 ORTHO05D006386 1.2e-50 203.8 192 56.2
Gorai.005G027800 Gossypium raimondii HOM05D005045 ORTHO05D006386 1.6e-50 203.4 192 55.7
MBI07_g27365_MAGBIO Magnolia biondii HOM05D005045 ORTHO05D006386 1.6e-50 203.4 192 57.3
Rhsim02G0061900 Rhododendron simsii HOM05D005045 ORTHO05D006386 1.6e-50 203.4 169 60.4
Sed0026716 Sechium edule HOM05D005045 ORTHO05D006386 2.1e-50 203.0 192 57.3
Thecc.04G195000 Theobroma cacao HOM05D005045 ORTHO05D006386 2.1e-50 203.0 192 55.7
HPP92_024209 Vanilla planifolia HOM05D005045 ORTHO05D006386 2.7e-50 202.6 192 54.2
Gohir.D02G022400 Gossypium hirsutum HOM05D005045 ORTHO05D006386 3.6e-50 202.2 192 55.2
Potri.001G320300 Populus trichocarpa HOM05D005045 ORTHO05D006386 8.0e-50 201.1 192 58.3
CSS0025820 Camellia sinensis var. sinensis HOM05D005045 ORTHO05D006386 1.0e-49 200.7 167 61.7
Ciclev10004166m.g Citrus clementina HOM05D005045 ORTHO05D006386 1.0e-49 200.7 192 56.8
Gohir.A02G019100 Gossypium hirsutum HOM05D005045 ORTHO05D006386 1.0e-49 200.7 192 55.2
Lj6g0005100 Lotus japonicus HOM05D005045 ORTHO05D006386 1.0e-49 200.7 195 55.9
FAN12G2321 Fragaria x ananassa HOM05D005045 ORTHO05D006386 1.8e-49 199.9 192 56.2
Psat5g100040 Pisum sativum HOM05D005045 ORTHO05D006386 2.3e-49 199.5 196 55.1
AL4G27320 Arabidopsis lyrata HOM05D005045 ORTHO05D006386 3.0e-49 199.1 192 54.2
Duzib151G0179 Durio zibethinus HOM05D005045 ORTHO05D006386 3.0e-49 199.1 167 59.3
FAN07G1455 Fragaria x ananassa HOM05D005045 ORTHO05D006386 3.0e-49 199.1 192 56.2
BcaNung07126 Brassica carinata HOM05D005045 ORTHO05D006386 4.0e-49 198.7 171 59.1
FvH4_4g13300 Fragaria vesca HOM05D005045 ORTHO05D006386 4.0e-49 198.7 192 55.7
RcHm_v2.0_Chr4g0413591 Rosa chinensis HOM05D005045 ORTHO05D006386 4.0e-49 198.7 167 60.5
BcaC01g05925 Brassica carinata HOM05D005045 ORTHO05D006386 6.8e-49 198.0 192 55.2
A03p17990 Brassica napus HOM05D005045 ORTHO05D006386 6.8e-49 198.0 192 55.2
C03p21030 Brassica napus HOM05D005045 ORTHO05D006386 6.8e-49 198.0 192 55.2
BolC3t14484H Brassica oleracea HOM05D005045 ORTHO05D006386 6.8e-49 198.0 192 55.2
BraA03t11060Z Brassica rapa HOM05D005045 ORTHO05D006386 6.8e-49 198.0 192 55.2
Migut.G00767 Erythranthe guttata HOM05D005045 ORTHO05D006386 8.8e-49 197.6 167 59.9
AT2G31970 Arabidopsis thaliana HOM05D005045 ORTHO05D006386 1.2e-48 197.2 195 52.3
Cc03_g08470 Coffea canephora HOM05D005045 ORTHO05D006386 1.2e-48 197.2 168 60.7
Thhalv10016151m.g Eutrema salsugineum HOM05D005045 ORTHO05D006386 1.2e-48 197.2 192 54.2
Medtr3g084300 Medicago truncatula HOM05D005045 ORTHO05D006386 1.2e-48 197.2 192 55.2
FAN22G0494 Fragaria x ananassa HOM05D005045 ORTHO05D006386 1.5e-48 196.8 192 55.7
Nn3g20083 Nelumbo nucifera HOM05D005045 ORTHO05D006386 2.6e-48 196.1 193 54.9
TPR.G25379 Trifolium pratense HOM05D005045 ORTHO05D006386 2.6e-48 196.1 192 54.7
PSO017G0058 Papaver somniferum HOM05D005045 ORTHO05D006386 1.7e-47 193.4 167 61.7
CARHR125720 Cardamine hirsuta HOM05D005045 ORTHO05D006386 2.2e-47 193.0 192 53.6
BcaB01g04004 Brassica carinata HOM05D005045 ORTHO05D006386 2.8e-47 192.6 192 53.1
Carub.0004s1329 Capsella rubella HOM05D005045 ORTHO05D006386 2.8e-47 192.6 192 53.1
Sc19g0007360 Simmondsia chinensis HOM05D005045 ORTHO05D006386 2.8e-47 192.6 192 54.7
ATR0561G148 Amborella trichopoda HOM05D005045 ORTHO05D006386 3.7e-47 192.2 167 58.1
Aa31LG5G5040 Aethionema arabicum HOM05D005045 ORTHO05D006386 5.3e-46 188.3 163 59.5
MSTRG.9796 Avicennia marina HOM05D005045 ORTHO05D006386 1.2e-45 187.2 167 57.5
Eucgr.H00025 Eucalyptus grandis HOM05D005045 ORTHO05D006386 1.0e-44 184.1 192 58.3
Os02g0497500 Oryza sativa ssp. japonica HOM05D005045 ORTHO05D006386 2.2e-44 183.0 167 54.5
DCAR_005488 Daucus carota HOM05D005045 ORTHO05D006386 3.8e-44 182.2 193 51.3
Prupe.1G165000 Prunus persica HOM05D005045 ORTHO05D006386 1.5e-43 180.3 125 72.0
MD05G1230300 Malus domestica HOM05D005045 ORTHO05D006386 2.5e-43 179.5 192 51.6
Manes.03G144200 Manihot esculenta HOM05D005045 ORTHO05D006386 2.5e-43 179.5 192 52.6
unitig_0.g1961 Utricularia gibba HOM05D005045 ORTHO05D006386 4.2e-43 178.7 192 52.1
SalBow8G0828 Salvia bowleyana HOM05D005045 ORTHO05D006386 9.4e-43 177.6 158 57.6
EL10Ac3g07454 Beta vulgaris HOM05D005045 ORTHO05D006386 2.1e-42 176.4 192 51.0
AUR62018556 Chenopodium quinoa HOM05D005045 ORTHO05D006386 6.8e-41 171.4 192 47.9
Sabra16G0202900 Salix brachista HOM05D005045 ORTHO05D006386 3.4e-40 169.1 256 43.4
SGA_v2.0_scaffold27G11679 Striga asiatica HOM05D005045 ORTHO05D006386 3.4e-40 169.1 193 47.2
FAN17G1875 Fragaria x ananassa HOM05D005045 ORTHO05D006386 2.4e-38 162.9 123 65.9
AUR62020863 Chenopodium quinoa HOM05D005045 ORTHO05D006386 5.4e-38 161.8 192 44.8
HanXRQChr02g0058481 Helianthus annuus HOM05D005045 ORTHO05D006386 2.7e-37 159.5 168 51.2
Lsat_1_v5_gn_6_59140 Lactuca sativa HOM05D005045 ORTHO05D006386 1.7e-36 156.8 160 53.8
ECA233G4939 Erigeron canadensis HOM05D005045 ORTHO05D006386 4.2e-35 152.1 168 49.4
Ah.04g149410 Amaranthus hybridus HOM05D005045 ORTHO05D006386 1.2e-34 150.6 205 44.9
Atru.chr4.1578 Acer truncatum HOM05D005045 ORTHO05D006386 9.2e-30 134.4 93 72.0
Mapoly0027s0186 Marchantia polymorpha HOM05D005045 ORTHO05D006386 1.6e-29 133.7 162 43.8
Pp3c10_3760 Physcomitrium patens HOM05D005045 ORTHO05D006386 2.3e-28 129.8 163 42.3
AagrBONN_evm.TU.Sc2ySwM_368.995 Anthoceros agrestis HOM05D002013 ORTHO05D002293 1.9e-27 126.7 168 41.1
COL.COLO4_20233 Corchorus olitorius HOM05D005045 ORTHO05D006386 2.8e-26 122.9 85 69.4
SMO217G0009 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 4.7e-26 122.1 154 44.8
CDE02G0777 Ceratophyllum demersum HOM05D005045 ORTHO05D006386 5.2e-25 118.6 192 41.7
vmacro15566 Vaccinium macrocarpon HOM05D005045 ORTHO05D006386 1.6e-21 107.1 167 41.3
SHI26072 Sapria himalayana HOM05D005045 ORTHO05D006386 5.0e-20 102.1 134 43.3
QL06p025788 Quercus lobata HOM05D005045 ORTHO05D006386 9.5e-19 97.8 60 75.0
SMO356G0717 Selaginella moellendorffii HOM05D005045 ORTHO05D006386 1.2e-18 97.4 171 36.3
CBR_g44539 Chara braunii HOM05D005045 ORTHO05D006386 4.7e-18 95.5 123 43.1
MCO01G132 Micromonas commoda HOM05D005045 ORTHO05D006386 8.3e-15 84.7 126 36.5
Zm00001eb181120 Zea mays HOM05D005045 ORTHO05D006386 1.1e-11 74.3 85 45.9
ECA233G3942 Erigeron canadensis HOM05D005045 ORTHO05D006386 8.9e-09 64.7 125 34.4
Cre03.g192550 Chlamydomonas reinhardtii HOM05D005045 ORTHO05D006386 2.4e-06 56.6 168 23.2
PRCOL_00000463 Prasinoderma coloniale HOM05D005045 ORTHO05D006386 7.1e-06 55.1 124 30.6


User provided reference genes

Program Settings