Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 1.9e-144 516.2 324 100.0
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 5.7e-117 424.9 325 75.4
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 1.7e-116 423.3 324 71.3
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 7.7e-114 414.5 325 73.5
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 1.6e-111 406.8 325 74.2
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 2.9e-105 386.0 327 70.0
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 4.2e-104 382.1 276 74.6
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 4.2e-104 382.1 280 73.6
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 3.4e-101 372.5 285 77.9
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 4.8e-100 368.6 227 85.5
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 1.0e-97 360.9 280 73.2
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 1.0e-97 360.9 280 68.9
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 1.3e-97 360.5 281 74.4
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 2.9e-97 359.4 226 83.6
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 8.6e-97 357.8 285 73.0
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 1.1e-96 357.5 284 72.5
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 1.5e-96 357.1 284 75.4
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 2.5e-96 356.3 284 72.2
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 3.3e-96 355.9 284 72.2
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 3.3e-96 355.9 275 70.9
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 1.6e-95 353.6 284 73.9
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 2.1e-95 353.2 265 71.3
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 2.1e-95 353.2 283 71.4
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 3.6e-95 352.4 284 70.1
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 3.6e-95 352.4 277 71.5
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 4.7e-95 352.1 281 71.9
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 1.0e-94 350.9 269 73.2
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 1.8e-94 350.1 226 80.5
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 1.8e-94 350.1 226 81.9
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 3.0e-94 349.4 280 73.6
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 1.2e-93 347.4 278 74.1
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 3.4e-93 345.9 277 69.7
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 3.4e-93 345.9 269 71.7
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 4.4e-93 345.5 286 70.6
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 5.7e-93 345.1 225 80.4
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 5.7e-93 345.1 281 70.8
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 9.8e-93 344.4 274 70.8
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 9.8e-93 344.4 277 70.4
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 2.8e-92 342.8 226 80.1
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 6.3e-92 341.7 285 70.5
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 1.1e-91 340.9 279 69.5
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 1.1e-91 340.9 277 69.3
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 1.8e-91 340.1 276 70.3
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 1.8e-91 340.1 287 69.0
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 1.8e-91 340.1 226 79.2
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 1.8e-91 340.1 282 69.1
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 2.4e-91 339.7 277 70.8
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 3.2e-91 339.3 280 70.0
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 4.1e-91 339.0 228 78.1
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 4.1e-91 339.0 226 78.3
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 5.4e-91 338.6 227 79.3
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 9.2e-91 337.8 281 69.4
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 1.6e-90 337.0 226 78.3
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 1.6e-90 337.0 228 76.8
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 2.0e-90 336.7 228 75.9
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 2.0e-90 336.7 226 78.3
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 2.7e-90 336.3 278 65.5
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 2.7e-90 336.3 278 65.5
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 2.7e-90 336.3 283 66.8
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 7.8e-90 334.7 228 75.9
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 7.8e-90 334.7 281 66.9
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 7.8e-90 334.7 229 77.3
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 1.0e-89 334.3 226 77.4
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 1.7e-89 333.6 285 65.6
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 2.3e-89 333.2 229 76.9
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 2.9e-89 332.8 229 76.4
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 2.9e-89 332.8 227 78.0
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 3.9e-89 332.4 227 78.0
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 6.6e-89 331.6 283 68.2
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 1.9e-88 330.1 280 70.0
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 2.5e-88 329.7 229 76.0
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 4.3e-88 328.9 226 75.7
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 4.3e-88 328.9 226 73.9
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 7.3e-88 328.2 227 76.2
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 9.5e-88 327.8 225 76.4
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 1.2e-87 327.4 277 66.8
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 8.0e-87 324.7 268 70.5
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 1.0e-86 324.3 296 66.2
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 1.4e-86 323.9 274 65.3
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 2.3e-86 323.2 228 73.2
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 3.1e-86 322.8 296 65.9
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 6.8e-86 321.6 230 73.9
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 7.5e-85 318.2 248 70.2
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 7.5e-85 318.2 229 74.7
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 8.3e-84 314.7 275 62.9
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 1.6e-82 310.5 289 63.0
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 7.8e-82 308.1 277 63.5
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 2.3e-81 306.6 226 71.2
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 3.0e-81 306.2 277 66.8
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 1.1e-80 304.3 224 70.5
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 2.1e-79 300.1 267 59.6
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 4.0e-78 295.8 371 49.9
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 6.8e-78 295.0 277 60.3
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 8.9e-78 294.7 216 70.8
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 8.9e-78 294.7 227 68.3
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 3.4e-77 292.7 257 63.8
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 3.4e-77 292.7 206 75.7
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 1.9e-75 287.0 188 79.8
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 1.8e-70 270.4 278 61.9
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 2.3e-70 270.0 188 75.5
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 7.6e-69 265.0 298 56.4
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 1.3e-68 264.2 277 58.8
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 4.0e-62 242.7 226 55.8
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 1.5e-61 240.7 149 82.6
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 5.8e-61 238.8 201 68.7
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 6.4e-60 235.3 261 54.8
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 4.6e-58 229.2 223 56.5
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 1.1e-56 224.6 182 72.0
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 8.1e-55 218.4 180 73.9
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 2.4e-54 216.9 225 51.1
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 5.3e-54 215.7 222 54.1
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 7.6e-45 185.3 149 71.8
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 3.7e-39 166.4 131 66.4
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 4.5e-37 159.5 140 53.6
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 6.5e-36 155.6 128 65.6
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 4.3e-32 142.9 150 53.3
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 7.9e-26 122.1 101 66.3
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 3.0e-25 120.2 220 38.2
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 9.7e-24 115.2 117 58.1
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 4.8e-23 112.8 62 90.3
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 8.2e-23 112.1 104 68.3
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 2.2e-20 104.0 78 70.5
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 1.4e-17 94.7 107 55.1
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 6.9e-14 82.4 70 65.7
BcaC08g43234 Brassica carinata HOM05D006016 ORTHO05D007553 9.1e-14 82.0 74 52.7
Medtr1g072620 Medicago truncatula HOM05D006016 ORTHO05D007553 1.4e-09 68.2 49 77.6
BolC6t35694H Brassica oleracea HOM05D006016 ORTHO05D007553 2.2e-07 60.8 46 73.9
Lj9C654T3 Lonicera japonica HOM05D006016 ORTHO05D007553 1.1e-06 58.5 43 67.4
Dinv13370 Davidia involucrata HOM05D006016 ORTHO05D007553 1.8e-06 57.8 41 70.7
Dinv16891 Davidia involucrata HOM05D006016 ORTHO05D007553 5.3e-06 56.2 39 71.8


User provided reference genes

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