Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0006065 Lotus japonicus HOM05D003686 ORTHO05D004322 3.0e-62 241.9 144 100.0
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 4.7e-31 138.3 80 91.2
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 1.1e-24 117.1 79 77.2
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 3.8e-20 102.1 83 67.5
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 3.8e-20 102.1 83 67.5
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 2.7e-18 95.9 74 71.6
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 3.5e-18 95.5 72 72.2
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 1.7e-17 93.2 86 60.5
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 1.9e-16 89.7 74 67.6
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 3.6e-15 85.5 69 68.1
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 3.1e-14 82.4 127 48.8
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 4.0e-14 82.0 71 64.8
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 2.6e-13 79.3 74 63.5
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 5.8e-13 78.2 83 60.2
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 1.7e-12 76.6 84 56.0
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 2.9e-12 75.9 68 60.3
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 6.4e-12 74.7 89 47.2
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 1.9e-11 73.2 78 55.1
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 7.1e-11 71.2 66 56.1
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 1.2e-10 70.5 77 48.1
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.6e-10 70.1 127 40.2
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 3.5e-10 68.9 129 40.3
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 3.5e-10 68.9 75 49.3
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 6.0e-10 68.2 72 54.2
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 6.0e-10 68.2 72 54.2
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 6.0e-10 68.2 83 51.8
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 1.0e-09 67.4 126 38.1
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 1.8e-09 66.6 115 42.6
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.8e-09 66.6 74 50.0
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 2.3e-09 66.2 67 50.7
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 3.0e-09 65.9 79 50.6
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 5.1e-09 65.1 98 46.9
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 5.1e-09 65.1 75 48.0
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 6.7e-09 64.7 77 48.1
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 6.7e-09 64.7 77 48.1
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 1.5e-08 63.5 69 55.1
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 1.5e-08 63.5 87 46.0
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 2.5e-08 62.8 55 58.2
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 3.3e-08 62.4 77 45.5
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 5.6e-08 61.6 129 38.0
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 5.6e-08 61.6 91 42.9
CSS0028767 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 9.6e-08 60.8 84 46.4
CSS0035418 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 9.6e-08 60.8 84 46.4
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.3e-07 60.5 126 36.5
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 2.8e-07 59.3 101 43.6
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 3.7e-07 58.9 83 45.8
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 6.2e-07 58.2 83 44.6
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 8.1e-07 57.8 93 47.3
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 2.4e-06 56.2 104 42.3
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 3.1e-06 55.8 80 45.0
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 6.9e-06 54.7 109 37.6
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 6.9e-06 54.7 109 37.6
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 6.9e-06 54.7 109 37.6
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 6.9e-06 54.7 109 37.6
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 6.9e-06 54.7 109 37.6


User provided reference genes

Program Settings