Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5E124G2 Lonicera japonica HOM05D001156 ORTHO05D001006 1.9e-43 178.7 88 100.0
Lju470C11T7 Lonicera japonica HOM05D001156 ORTHO05D001006 3.2e-38 161.4 87 90.8
Dinv20649 Davidia involucrata HOM05D001156 ORTHO05D001006 2.0e-32 142.1 83 81.9
Hma1.2p1_0176F.1_g077370 Hydrangea macrophylla HOM05D001156 ORTHO05D001006 6.4e-31 137.1 83 78.3
Hma1.2p1_0701F.1_g205880 Hydrangea macrophylla HOM05D001156 ORTHO05D001006 6.4e-31 137.1 84 76.2
Hma1.2p1_2409F.1_g321500 Hydrangea macrophylla HOM05D001156 ORTHO05D001006 6.4e-31 137.1 84 76.2
DCAR_026138 Daucus carota HOM05D001156 ORTHO05D001006 1.1e-30 136.3 84 77.4
Duzib205G0148 Durio zibethinus HOM05D001156 ORTHO05D001006 4.6e-29 131.0 83 73.5
TWI14G1176 Tripterygium wilfordii HOM05D001156 ORTHO05D001006 4.6e-29 131.0 83 72.3
Nn4g24689 Nelumbo nucifera HOM05D001156 ORTHO05D001006 7.9e-29 130.2 83 72.3
QL10p015865 Quercus lobata HOM05D001156 ORTHO05D001006 7.9e-29 130.2 83 75.9
TAR622G0652 Trochodendron aralioides HOM05D001156 ORTHO05D001006 7.9e-29 130.2 84 75.0
Actinidia19323 Actinidia chinensis HOM05D001156 ORTHO05D000024 1.0e-28 129.8 85 74.1
MD06G1173500 Malus domestica HOM05D001156 ORTHO05D001006 1.0e-28 129.8 83 73.5
Dinv02539 Davidia involucrata HOM05D002723 ORTHO05D003240 1.8e-28 129.0 83 74.7
ECA246G0236 Erigeron canadensis HOM05D001156 ORTHO05D001006 1.8e-28 129.0 83 74.7
CSS0016934 Camellia sinensis var. sinensis HOM05D001156 ORTHO05D001006 3.0e-28 128.3 83 72.3
Oeu018233.1 Olea europaea HOM05D001156 ORTHO05D001006 3.0e-28 128.3 84 73.8
Peaxi162Scf00047g02451 Petunia axillaris HOM05D003092 ORTHO05D003977 3.0e-28 128.3 83 72.3
Atru.chr9.2482 Acer truncatum HOM05D001156 ORTHO05D001006 3.9e-28 127.9 84 75.0
Nn4g22755 Nelumbo nucifera HOM05D001156 ORTHO05D001006 3.9e-28 127.9 83 71.1
Peaxi162Scf00047g02423 Petunia axillaris HOM05D001156 ORTHO05D001006 3.9e-28 127.9 83 72.3
Prupe.5G173000 Prunus persica HOM05D001156 ORTHO05D001006 5.1e-28 127.5 83 72.3
Manes.06G105200 Manihot esculenta HOM05D001156 ORTHO05D001006 8.7e-28 126.7 83 72.3
Rhsim08G0172800 Rhododendron simsii HOM05D001156 ORTHO05D001006 8.7e-28 126.7 85 71.8
MD14G1180000 Malus domestica HOM05D001156 ORTHO05D001006 1.5e-27 125.9 83 71.1
PGSC0003DMG400008867 Solanum tuberosum HOM05D001156 ORTHO05D001006 1.5e-27 125.9 83 75.9
Cc00_g05000 Coffea canephora HOM05D001156 ORTHO05D001006 3.3e-27 124.8 83 71.1
HanXRQChr05g0156251 Helianthus annuus HOM05D001156 ORTHO05D001006 4.3e-27 124.4 83 72.3
Solyc09g010030.3 Solanum lycopersicum HOM05D001156 ORTHO05D001006 4.3e-27 124.4 83 74.7
Thecc.03G013100 Theobroma cacao HOM05D001156 ORTHO05D001006 4.3e-27 124.4 83 72.3
Gohir.A12G274300 Gossypium hirsutum HOM05D001156 ORTHO05D001006 5.6e-27 124.0 83 69.9
CANSAT80G0830 Cannabis sativa HOM05D001156 ORTHO05D001006 7.4e-27 123.6 84 69.0
Haze_07504 Corylus avellana HOM05D001156 ORTHO05D001006 7.4e-27 123.6 84 71.4
Sopen09g004770 Solanum pennellii HOM05D001156 ORTHO05D001006 9.6e-27 123.2 83 73.5
Nitab4.5_0001875g0090 Nicotiana tabacum HOM05D001156 ORTHO05D001006 1.3e-26 122.9 83 73.5
Cpa.g.sc286.9 Carica papaya HOM05D001156 ORTHO05D001006 1.6e-26 122.5 84 69.0
Cc00_g05020 Coffea canephora HOM05D001156 ORTHO05D001006 1.6e-26 122.5 85 67.1
ClCG06G015740 Citrullus lanatus HOM05D001156 ORTHO05D001006 2.1e-26 122.1 76 76.3
Gohir.D12G275000 Gossypium hirsutum HOM05D001156 ORTHO05D001006 2.1e-26 122.1 83 68.7
Gorai.008G295500 Gossypium raimondii HOM05D001156 ORTHO05D001006 2.1e-26 122.1 83 68.7
Eucgr.D02092 Eucalyptus grandis HOM05D001156 ORTHO05D001006 2.8e-26 121.7 86 69.8
MELO3C003920.2 Cucumis melo HOM05D001156 ORTHO05D001006 3.7e-26 121.3 83 71.1
CAN.G397.75 Capsicum annuum HOM05D001156 ORTHO05D001006 4.8e-26 120.9 76 76.3
Lsat_1_v5_gn_5_14700 Lactuca sativa HOM05D001156 ORTHO05D001006 4.8e-26 120.9 85 71.8
Cc11_g12810 Coffea canephora HOM05D001156 ORTHO05D001006 6.2e-26 120.6 83 68.7
TWI39G0852 Tripterygium wilfordii HOM05D001156 ORTHO05D001006 6.2e-26 120.6 83 71.1
Nitab4.5_0002015g0010 Nicotiana tabacum HOM05D001156 ORTHO05D001006 8.2e-26 120.2 83 72.3
FAN13G2117 Fragaria x ananassa HOM05D001156 ORTHO05D001006 1.4e-25 119.4 86 69.8
GSVIVG01007737001 Vitis vinifera HOM05D001156 ORTHO05D001006 1.4e-25 119.4 82 69.5
FAN08G0627 Fragaria x ananassa HOM05D001156 ORTHO05D001006 1.8e-25 119.0 86 68.6
CsaV3_3G028630 Cucumis sativus L. HOM05D001156 ORTHO05D001006 2.4e-25 118.6 83 68.7
Nitab4.5_0005023g0040 Nicotiana tabacum HOM05D001156 ORTHO05D001006 2.4e-25 118.6 83 71.1
vmacro19392 Vaccinium macrocarpon HOM05D001156 ORTHO05D001006 2.4e-25 118.6 79 70.9
Potri.015G077200 Populus trichocarpa HOM05D001156 ORTHO05D001006 3.1e-25 118.2 85 68.2
PGR102G0269 Punica granatum HOM05D001156 ORTHO05D001006 3.1e-25 118.2 84 70.2
RcHm_v2.0_Chr7g0193501 Rosa chinensis HOM05D001156 ORTHO05D001006 3.1e-25 118.2 84 67.9
COL.COLO4_30227 Corchorus olitorius HOM05D001156 ORTHO05D001006 4.0e-25 117.9 84 70.2
FAN18G2375 Fragaria x ananassa HOM05D001156 ORTHO05D001006 5.3e-25 117.5 84 69.0
FvH4_5g05340 Fragaria vesca HOM05D001156 ORTHO05D001006 6.9e-25 117.1 84 69.0
FAN04G1980 Fragaria x ananassa HOM05D001156 ORTHO05D001006 1.2e-24 116.3 86 67.4
Ciclev10012849m.g Citrus clementina HOM05D001156 ORTHO05D001006 1.5e-24 115.9 81 70.4
Sabra15G0101900 Salix brachista HOM05D001156 ORTHO05D001006 2.0e-24 115.5 85 68.2
Sed0004231 Sechium edule HOM05D001156 ORTHO05D001006 3.4e-24 114.8 83 65.1
HanXRQChr07g0196421 Helianthus annuus HOM05D001156 ORTHO05D001006 4.5e-24 114.4 83 68.7
Cfa019137 Carpinus fangiana HOM05D001156 ORTHO05D001006 5.8e-24 114.0 83 67.5
CiPaw.11G025700 Carya illinoinensis HOM05D001156 ORTHO05D001006 1.0e-23 113.2 83 66.3
THA.LOC104822304 Tarenaya hassleriana HOM05D001156 ORTHO05D001006 2.9e-23 111.7 83 62.7
COL.COLO4_30043 Corchorus olitorius HOM05D001156 ORTHO05D001006 6.5e-23 110.5 84 65.5
TAR371G0150 Trochodendron aralioides HOM05D001156 ORTHO05D001006 6.5e-23 110.5 83 63.9
Aqoxy2G02136 Aquilegia oxysepala HOM05D001156 ORTHO05D001006 8.4e-23 110.2 83 65.1
Aqoxy6G01858 Aquilegia oxysepala HOM05D001156 ORTHO05D001006 8.4e-23 110.2 83 63.9
MSTRG.17770 Avicennia marina HOM05D001156 ORTHO05D001006 8.4e-23 110.2 83 65.1
SalBow6G0603 Salvia bowleyana HOM05D001156 ORTHO05D001006 1.1e-22 109.8 83 65.1
COL.COLO4_30231 Corchorus olitorius HOM05D001156 ORTHO05D001006 1.9e-22 109.0 84 66.7
MBI10_g06740_MAGBIO Magnolia biondii HOM05D001156 ORTHO05D001006 1.9e-22 109.0 86 68.6
Aa31LG5G16530 Aethionema arabicum HOM05D001156 ORTHO05D001006 3.2e-22 108.2 85 62.4
Cc00_g05010 Coffea canephora HOM05D001156 ORTHO05D001006 1.2e-21 106.3 83 62.7
MELO3C034168.2 Cucumis melo HOM05D001156 ORTHO05D001006 2.1e-21 105.5 83 61.4
Migut.N01934 Erythranthe guttata HOM05D001156 ORTHO05D001006 6.1e-21 104.0 84 60.7
ECA247G0150 Erigeron canadensis HOM05D001156 ORTHO05D001006 3.9e-20 101.3 83 65.1
unitig_26.g10136 Utricularia gibba HOM05D001156 ORTHO05D001006 3.9e-20 101.3 70 65.7
SGA_v2.0_scaffold62G21596 Striga asiatica HOM05D001156 ORTHO05D001006 1.1e-19 99.8 84 59.5
Rhsim08G0172700 Rhododendron simsii HOM05D001156 ORTHO05D000024 9.7e-19 96.7 70 67.1
Manes.14G065500 Manihot esculenta HOM05D001156 ORTHO05D001006 2.8e-18 95.1 69 68.1
Sp3g04990 Schrenkiella parvula HOM05D001156 ORTHO05D001006 2.8e-18 95.1 84 58.3
THA.LOC104802756 Tarenaya hassleriana HOM05D001156 ORTHO05D001006 2.8e-18 95.1 83 60.2
Gorai.011G186400 Gossypium raimondii HOM05D001156 ORTHO05D001006 4.8e-18 94.4 66 63.6
Gohir.D10G167100 Gossypium hirsutum HOM05D001156 ORTHO05D001006 6.3e-18 94.0 66 63.6
BraA05t22918Z Brassica rapa HOM05D001156 ORTHO05D001006 1.8e-17 92.4 83 57.8
A05p41960 Brassica napus HOM05D001156 ORTHO05D001006 2.4e-17 92.0 83 57.8
PSO339G3237 Papaver somniferum HOM05D001156 ORTHO05D001006 2.4e-17 92.0 83 57.8
PSO675G7370 Papaver somniferum HOM05D001156 ORTHO05D001006 2.4e-17 92.0 84 54.8
Lalb_Chr18g0058261 Lupinus albus HOM05D001156 ORTHO05D001006 3.1e-17 91.7 63 68.3
PSO541G0845 Papaver somniferum HOM05D001156 ORTHO05D001006 3.1e-17 91.7 83 55.4
Carub.0003s0547 Capsella rubella HOM05D001156 ORTHO05D001006 4.1e-17 91.3 84 57.1
C05p61210 Brassica napus HOM05D001156 ORTHO05D001006 5.3e-17 90.9 83 56.6
BolC5t34781H Brassica oleracea HOM05D001156 ORTHO05D001006 5.3e-17 90.9 83 56.6
PSO384G4181 Papaver somniferum HOM05D001156 ORTHO05D001006 5.3e-17 90.9 83 57.8
AT3G06040 Arabidopsis thaliana HOM05D001156 ORTHO05D001006 9.0e-17 90.1 84 54.8
Thhalv10021590m.g Eutrema salsugineum HOM05D001156 ORTHO05D001006 9.0e-17 90.1 84 56.0
Glyma.09G029000 Glycine max HOM05D001156 ORTHO05D001006 1.5e-16 89.4 63 66.7
AL3G16880 Arabidopsis lyrata HOM05D001156 ORTHO05D001006 2.0e-16 89.0 84 54.8
BcaC05g30063 Brassica carinata HOM05D001156 ORTHO05D001006 2.0e-16 89.0 83 55.4
Glyma.15G134800 Glycine max HOM05D001156 ORTHO05D001006 4.5e-16 87.8 63 68.3
Lj6g0014938 Lotus japonicus HOM05D001156 ORTHO05D001006 4.5e-16 87.8 64 65.6
Psat1g164640 Pisum sativum HOM05D001156 ORTHO05D001006 4.5e-16 87.8 62 71.0
VMungo0540G0215 Vigna mungo HOM05D001156 ORTHO05D001006 7.7e-16 87.0 65 63.1
Phvul.006G124100 Phaseolus vulgaris HOM05D001156 ORTHO05D001006 1.3e-15 86.3 65 63.1
CARHR080540 Cardamine hirsuta HOM05D001156 ORTHO05D001006 2.9e-15 85.1 84 54.8
arahy.Tifrunner.gnm1.ann1.7WX4FN Arachis hypogaea HOM05D001156 ORTHO05D001006 1.9e-14 82.4 53 73.6
Sc12g0005310 Simmondsia chinensis HOM05D001156 ORTHO05D001006 1.9e-14 82.4 83 53.0
HPP92_008592 Vanilla planifolia HOM05D001156 ORTHO05D001006 1.9e-14 82.4 61 63.9
TPR.G8034 Trifolium pratense HOM05D001156 ORTHO05D001006 7.2e-14 80.5 62 64.5
Ca_00920_v3 Cicer arietinum L. HOM05D001156 ORTHO05D001006 9.4e-14 80.1 61 65.6
Medtr2g031760 Medicago truncatula HOM05D001156 ORTHO05D001006 1.2e-13 79.7 62 69.4
SHI16975 Sapria himalayana HOM05D001156 ORTHO05D001006 2.1e-13 79.0 73 57.5
Ah.02g110810 Amaranthus hybridus HOM05D001156 ORTHO05D001006 8.8e-12 73.6 78 50.0
AUR62030957 Chenopodium quinoa HOM05D001156 ORTHO05D001006 2.5e-11 72.0 78 50.0
EL10Ac5g10741 Beta vulgaris HOM05D001156 ORTHO05D001006 4.3e-11 71.2 78 48.7
ATR0068G065 Amborella trichopoda HOM05D001156 ORTHO05D001006 9.7e-11 70.1 44 65.9
AUR62008204 Chenopodium quinoa HOM05D001156 ORTHO05D001006 1.3e-10 69.7 47 68.1
Zm00001eb205850 Zea mays HOM05D001156 ORTHO05D001006 1.7e-10 69.3 43 72.1
ATR0752G124 Amborella trichopoda HOM05D001156 ORTHO05D001006 2.8e-10 68.6 44 63.6
BolC3t16477H Brassica oleracea HOM05D001156 ORTHO05D043196 1.1e-09 66.6 50 58.0
Os02g0198900 Oryza sativa ssp. japonica HOM05D001156 ORTHO05D001006 3.1e-09 65.1 43 69.8
SEGI_23469 Sequoiadendron giganteum HOM05D001156 ORTHO05D001006 4.1e-09 64.7 54 61.1
A03p34480 Brassica napus HOM05D001156 ORTHO05D001006 6.9e-09 63.9 80 45.0
CDE05G0428 Ceratophyllum demersum HOM05D001156 ORTHO05D001006 2.6e-08 62.0 33 75.8
Zm00001eb235930 Zea mays HOM05D001156 ORTHO05D001006 3.4e-08 61.6 43 67.4
Cpa.g.sc153.25 Carica papaya HOM05D001156 ORTHO05D001006 2.2e-07 58.9 35 74.3
BraA03t12625Z Brassica rapa HOM05D001156 ORTHO05D043196 4.2e-06 54.7 41 58.5


User provided reference genes

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