Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A674T64 Lonicera japonica HOM05D000070 ORTHO05D006627 1.3e-241 839.3 428 100.0
Lj4A664T70 Lonicera japonica HOM05D000070 ORTHO05D006627 2.1e-167 592.8 437 74.8
Dinv05864 Davidia involucrata HOM05D000070 ORTHO05D006627 2.2e-156 556.2 429 70.9
GSVIVG01013614001 Vitis vinifera HOM05D000070 ORTHO05D006627 3.4e-141 505.8 427 64.6
TAR626G1726 Trochodendron aralioides HOM05D000070 ORTHO05D006627 2.8e-140 502.7 429 63.6
Cfa006373 Carpinus fangiana HOM05D000070 ORTHO05D006627 5.0e-137 491.9 428 61.0
Prupe.4G112300 Prunus persica HOM05D000070 ORTHO05D006627 4.4e-133 478.8 427 61.6
CiPaw.02G023600 Carya illinoinensis HOM05D000070 ORTHO05D006627 2.2e-132 476.5 430 59.3
Duzib192G0613 Durio zibethinus HOM05D000070 ORTHO05D006627 8.3e-132 474.6 422 58.3
Actinidia01326 Actinidia chinensis HOM05D000070 ORTHO05D006627 1.1e-131 474.2 431 62.2
Migut.C01080 Erythranthe guttata HOM05D000070 ORTHO05D006627 7.8e-130 468.0 430 60.0
Oeu040394.2 Olea europaea HOM05D000070 ORTHO05D006627 1.0e-129 467.6 427 60.4
Gohir.D10G048401 Gossypium hirsutum HOM05D000070 ORTHO05D006627 1.9e-128 463.4 422 58.1
Gorai.011G051500 Gossypium raimondii HOM05D000070 ORTHO05D006627 3.3e-128 462.6 422 58.1
MD05G1251500 Malus domestica HOM05D000070 ORTHO05D006627 3.3e-128 462.6 426 60.3
Thecc.06G135300 Theobroma cacao HOM05D000070 ORTHO05D006627 7.3e-128 461.5 422 58.1
Haze_04406 Corylus avellana HOM05D000070 ORTHO05D006627 1.2e-127 460.7 428 58.6
Nitab4.5_0003485g0060 Nicotiana tabacum HOM05D000070 ORTHO05D006627 2.8e-127 459.5 426 60.6
Cc10_g13650 Coffea canephora HOM05D000070 ORTHO05D006627 8.0e-127 458.0 424 57.5
vmacro20772 Vaccinium macrocarpon HOM05D000070 ORTHO05D006627 8.0e-127 458.0 511 53.4
CANSAT35G0895 Cannabis sativa HOM05D000070 ORTHO05D006627 1.0e-126 457.6 427 59.7
CAN.G405.6 Capsicum annuum HOM05D000070 ORTHO05D006627 1.0e-126 457.6 424 59.2
Sopen04g025820 Solanum pennellii HOM05D000070 ORTHO05D006627 1.0e-126 457.6 426 59.4
Nitab4.5_0000317g0130 Nicotiana tabacum HOM05D000070 ORTHO05D006627 1.4e-126 457.2 426 59.9
Solyc04g057960.4 Solanum lycopersicum HOM05D000070 ORTHO05D006627 1.2e-125 454.1 426 59.2
TWI09G1172 Tripterygium wilfordii HOM05D000070 ORTHO05D006627 3.7e-124 449.1 429 57.3
SalBow7G2869 Salvia bowleyana HOM05D000070 ORTHO05D006627 3.5e-122 442.6 431 58.0
FvH4_3g12310 Fragaria vesca HOM05D000070 ORTHO05D006627 7.8e-122 441.4 411 58.2
Nn7g37939 Nelumbo nucifera HOM05D000070 ORTHO05D006627 6.6e-121 438.3 429 55.7
MBI01_g11418_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D006627 1.1e-120 437.6 427 55.3
RcHm_v2.0_Chr5g0020121 Rosa chinensis HOM05D000070 ORTHO05D006627 3.3e-120 436.0 424 56.6
Lsat_1_v5_gn_1_6720 Lactuca sativa HOM05D000070 ORTHO05D006627 5.6e-120 435.3 424 57.8
QL11p017850 Quercus lobata HOM05D000070 ORTHO05D006627 1.2e-119 434.1 427 56.2
COL.COLO4_30925 Corchorus olitorius HOM05D000070 ORTHO05D006627 2.1e-119 433.3 426 56.1
HanXRQChr02g0040551 Helianthus annuus HOM05D000070 ORTHO05D006627 8.0e-119 431.4 424 56.1
Manes.11G051180 Manihot esculenta HOM05D000070 ORTHO05D006627 8.0e-119 431.4 424 55.0
Aqoxy1G01537 Aquilegia oxysepala HOM05D000070 ORTHO05D006627 1.5e-117 427.2 432 55.3
Peaxi162Scf00066g00526 Petunia axillaris HOM05D000070 ORTHO05D006627 2.0e-117 426.8 426 56.6
Ciclev10014090m.g Citrus clementina HOM05D000070 ORTHO05D006627 4.4e-117 425.6 427 56.7
ECA247G0604 Erigeron canadensis HOM05D000070 ORTHO05D006627 2.9e-116 422.9 420 55.5
FAN21G2030 Fragaria x ananassa HOM05D000070 ORTHO05D006627 9.2e-115 417.9 434 54.6
Glyma.07G224000 Glycine max HOM05D000070 ORTHO05D006627 2.7e-114 416.4 425 53.2
Atru.chr10.621 Acer truncatum HOM05D000070 ORTHO05D006627 6.0e-114 415.2 428 55.1
PGR102G0872 Punica granatum HOM05D000070 ORTHO05D006627 5.1e-113 412.1 427 54.8
Rhsim01G0112400 Rhododendron simsii HOM05D000070 ORTHO05D006627 6.6e-113 411.8 575 45.6
Potri.001G174100 Populus trichocarpa HOM05D000070 ORTHO05D006627 4.3e-112 409.1 424 54.0
arahy.Tifrunner.gnm1.ann1.UR3YMK Arachis hypogaea HOM05D000070 ORTHO05D006627 1.6e-111 407.1 425 53.6
arahy.Tifrunner.gnm1.ann1.REAP7F Arachis hypogaea HOM05D000070 ORTHO05D006627 1.8e-110 403.7 425 53.2
DCAR_014363 Daucus carota HOM05D000070 ORTHO05D006627 1.2e-109 401.0 355 61.4
Sabra01G0137800 Salix brachista HOM05D000070 ORTHO05D006627 2.6e-109 399.8 435 52.6
Carub.0006s0739 Capsella rubella HOM05D000070 ORTHO05D006627 7.5e-109 398.3 429 50.8
Lalb_Chr05g0219821 Lupinus albus HOM05D000070 ORTHO05D006627 3.7e-108 396.0 425 52.0
PSO541G5972 Papaver somniferum HOM05D000070 ORTHO05D006627 6.4e-108 395.2 435 52.4
PSO675G1403 Papaver somniferum HOM05D000070 ORTHO05D006627 8.3e-108 394.8 413 53.3
CARHR204530 Cardamine hirsuta HOM05D000070 ORTHO05D006627 1.1e-107 394.4 426 49.8
AT5G08470 Arabidopsis thaliana HOM05D000070 ORTHO05D006627 9.2e-107 391.3 421 51.1
Phvul.002G100600 Phaseolus vulgaris HOM05D000070 ORTHO05D006627 9.2e-107 391.3 425 51.1
SGA_v2.0_scaffold52G18907 Striga asiatica HOM05D000070 ORTHO05D006627 1.6e-106 390.6 443 50.8
FAN16G1763 Fragaria x ananassa HOM05D000070 ORTHO05D006627 3.5e-106 389.4 484 48.3
Ca_18785_v3 Cicer arietinum L. HOM05D000070 ORTHO05D006627 4.6e-106 389.0 425 52.0
Sp6g34430 Schrenkiella parvula HOM05D000070 ORTHO05D006627 6.0e-106 388.7 426 49.5
BolC9t59597H Brassica oleracea HOM05D000070 ORTHO05D006627 3.0e-105 386.3 423 50.6
A10p28270 Brassica napus HOM05D000070 ORTHO05D006627 5.1e-105 385.6 423 50.1
Sed0014200 Sechium edule HOM05D000070 ORTHO05D006627 1.9e-104 383.6 425 51.3
Thhalv10012497m.g Eutrema salsugineum HOM05D000070 ORTHO05D006627 4.3e-104 382.5 427 49.4
Psat7g132840 Pisum sativum HOM05D000070 ORTHO05D006627 5.6e-104 382.1 427 50.1
BraA10t44876Z Brassica rapa HOM05D000070 ORTHO05D006627 1.1e-102 377.9 424 49.5
Lj4g0001942 Lotus japonicus HOM05D000070 ORTHO05D006627 2.4e-102 376.7 430 49.1
C09p68530 Brassica napus HOM05D000070 ORTHO05D006627 4.0e-102 375.9 423 49.4
Eucgr.E02009 Eucalyptus grandis HOM05D000070 ORTHO05D006627 5.2e-102 375.6 426 49.8
Medtr4g083460 Medicago truncatula HOM05D000070 ORTHO05D006627 1.5e-101 374.0 427 49.2
BcaB08g37256 Brassica carinata HOM05D000070 ORTHO05D006627 2.2e-100 370.2 426 48.8
TPR.G9706 Trifolium pratense HOM05D000070 ORTHO05D006627 2.2e-100 370.2 428 49.3
ClCG01G008970 Citrullus lanatus HOM05D000070 ORTHO05D006627 8.4e-100 368.2 428 50.0
Aa31LG3G18070 Aethionema arabicum HOM05D000065 ORTHO05D006627 1.4e-99 367.5 424 48.8
MELO3C021783.2 Cucumis melo HOM05D000070 ORTHO05D006627 7.1e-99 365.2 428 49.3
Sc07g0007670 Simmondsia chinensis HOM05D000070 ORTHO05D006627 3.6e-95 352.8 423 49.2
EL10Ac2g02462 Beta vulgaris HOM05D000070 ORTHO05D006627 4.8e-95 352.4 429 47.3
ATR0763G153 Amborella trichopoda HOM05D000070 ORTHO05D006627 1.1e-94 351.3 389 50.6
CsaV3_1G046740 Cucumis sativus L. HOM05D000070 ORTHO05D006627 2.4e-94 350.1 428 47.9
AUR62024782 Chenopodium quinoa HOM05D000070 ORTHO05D006627 4.2e-91 339.3 402 50.0
AUR62032439 Chenopodium quinoa HOM05D000070 ORTHO05D006627 7.1e-91 338.6 402 49.0
CDE02G2199 Ceratophyllum demersum HOM05D000070 ORTHO05D006627 4.8e-87 325.9 426 46.9
Hund09412 Selenicereus undatus HOM05D000070 ORTHO05D006627 9.3e-83 311.6 408 47.1
Zm00001eb176300 Zea mays HOM05D000070 ORTHO05D006627 8.1e-79 298.5 354 47.7
Ah.15g098730 Amaranthus hybridus HOM05D000070 ORTHO05D006627 4.8e-71 272.7 341 46.6
Cpa.g.sc138.31 Carica papaya HOM05D000070 ORTHO05D006627 1.1e-70 271.6 295 51.9
FAN26G0150 Fragaria x ananassa HOM05D000049 ORTHO05D006627 4.5e-45 186.4 258 46.5
Mapoly0173s0010 Marchantia polymorpha HOM05D000070 ORTHO05D006627 9.4e-43 178.7 435 31.5
HPP92_028553 Vanilla planifolia HOM05D000070 ORTHO05D006627 9.7e-40 168.7 154 58.4
Pp3c8_20390 Physcomitrium patens HOM05D000070 ORTHO05D006627 2.0e-37 161.0 424 30.2
SHI32171 Sapria himalayana HOM05D000070 ORTHO05D006627 2.6e-37 160.6 293 34.5
arahy.Tifrunner.gnm1.ann1.V5UDLG Arachis hypogaea HOM05D000070 ORTHO05D006627 1.5e-35 154.8 138 60.1
SMO236G0075 Selaginella moellendorffii HOM05D000070 ORTHO05D006627 4.7e-34 149.8 328 34.5
Hma1.2p1_1220F.1_g267990 Hydrangea macrophylla HOM05D000070 ORTHO05D006627 1.5e-32 144.8 107 69.2
SEGI_30204 Sequoiadendron giganteum HOM05D000070 ORTHO05D006627 1.3e-28 131.7 280 34.3
CBR_g8074 Chara braunii HOM05D000070 ORTHO05D006627 3.6e-26 123.6 183 38.3
AL6G19130 Arabidopsis lyrata HOM05D000070 ORTHO05D006627 8.8e-25 119.0 149 46.3
SHI32173 Sapria himalayana HOM05D000070 ORTHO05D006627 1.4e-22 111.7 126 51.6
PRCOL_00006764 Prasinoderma coloniale HOM05D000070 ORTHO05D006627 1.2e-21 108.6 192 37.5
TPR.G20301 Trifolium pratense HOM05D000070 ORTHO05D006627 2.3e-20 104.4 122 47.5
Os08g0556500 Oryza sativa ssp. japonica HOM05D000070 ORTHO05D006627 2.9e-20 104.0 93 53.8
FAN16G0001 Fragaria x ananassa HOM05D000070 ORTHO05D006627 6.6e-20 102.8 80 62.5
TPR.G24989 Trifolium pratense HOM05D056525 ORTHO05D006627 5.2e-17 93.2 97 51.5
MD15G1400800 Malus domestica HOM05D000070 ORTHO05D006627 3.4e-16 90.5 92 50.0
Hma1.2p1_1220F.1_g268000 Hydrangea macrophylla HOM05D000070 ORTHO05D006627 4.6e-13 80.1 77 57.1
TPR.G709 Trifolium pratense HOM05D000070 ORTHO05D006627 2.9e-12 77.4 79 54.4
TPR.G27666 Trifolium pratense HOM05D000070 ORTHO05D006627 5.0e-12 76.6 161 37.3
Gohir.A07G143100 Gossypium hirsutum HOM05D005751 ORTHO05D007198 6.6e-12 76.3 101 40.6
MD10G1232000 Malus domestica HOM05D000070 ORTHO05D006627 2.3e-09 67.8 71 50.7
arahy.Tifrunner.gnm1.ann1.Z6028V Arachis hypogaea HOM05D000070 ORTHO05D006627 4.0e-09 67.0 143 37.1
TPR.G96 Trifolium pratense HOM05D000070 ORTHO05D006627 5.2e-09 66.6 46 65.2
Cre16.g679200 Chlamydomonas reinhardtii HOM05D000070 ORTHO05D006627 4.4e-08 63.5 115 33.9
Cfa026932 Carpinus fangiana HOM05D000361 ORTHO05D005006 1.3e-07 62.0 218 27.1


User provided reference genes

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