Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 1.2e-106 389.8 197 100.0
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 5.5e-46 188.3 96 93.8
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 7.1e-46 188.0 96 93.8
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 9.3e-46 187.6 95 95.8
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 9.3e-46 187.6 133 73.7
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 1.2e-45 187.2 95 93.7
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.2e-45 187.2 95 94.7
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.2e-45 187.2 95 94.7
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 1.2e-45 187.2 95 94.7
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 1.2e-45 187.2 95 94.7
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 2.7e-45 186.0 95 93.7
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 3.5e-45 185.7 95 93.7
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 3.5e-45 185.7 95 92.6
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 3.5e-45 185.7 95 92.6
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 3.5e-45 185.7 95 93.7
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 6.0e-45 184.9 96 91.7
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 6.0e-45 184.9 95 93.7
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 7.9e-45 184.5 95 93.7
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 1.0e-44 184.1 95 92.6
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 1.3e-44 183.7 98 90.8
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.3e-44 183.7 95 92.6
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 1.3e-44 183.7 95 93.7
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 3.9e-44 182.2 98 89.8
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 5.1e-44 181.8 95 92.6
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 5.1e-44 181.8 95 92.6
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 5.1e-44 181.8 95 93.7
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 8.7e-44 181.0 95 92.6
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 1.5e-43 180.3 102 86.3
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 1.9e-43 179.9 95 91.6
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 1.9e-43 179.9 95 92.6
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 4.3e-43 178.7 95 89.5
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 7.4e-43 177.9 95 88.4
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 1.3e-42 177.2 95 91.6
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 1.3e-42 177.2 95 91.6
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 1.3e-42 177.2 95 91.6
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 2.1e-42 176.4 95 90.5
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 3.7e-42 175.6 95 90.5
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 6.2e-42 174.9 95 89.5
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 1.1e-41 174.1 95 90.5
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 1.8e-41 173.3 95 87.4
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 2.4e-41 172.9 98 83.7
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 2.4e-41 172.9 102 84.3
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 3.1e-41 172.6 95 85.3
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 4.0e-41 172.2 95 87.4
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 4.0e-41 172.2 95 88.4
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 4.0e-41 172.2 95 86.3
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 5.3e-41 171.8 95 89.5
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 5.3e-41 171.8 96 88.5
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 6.9e-41 171.4 95 88.4
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 6.9e-41 171.4 113 77.0
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 9.0e-41 171.0 135 68.1
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 1.2e-40 170.6 95 85.3
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 2.0e-40 169.9 95 88.4
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 2.0e-40 169.9 113 76.1
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 2.6e-40 169.5 102 79.4
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 4.5e-40 168.7 95 83.2
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 4.5e-40 168.7 95 83.2
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 1.0e-39 167.5 95 85.3
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 1.3e-39 167.2 95 84.2
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 1.3e-39 167.2 113 76.1
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 1.7e-39 166.8 113 76.1
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 1.7e-39 166.8 95 86.3
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 2.2e-39 166.4 95 83.2
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 2.2e-39 166.4 95 83.2
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 2.2e-39 166.4 95 85.3
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 2.2e-39 166.4 95 86.3
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 2.2e-39 166.4 95 86.3
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 2.2e-39 166.4 95 86.3
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 2.9e-39 166.0 95 86.3
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 5.0e-39 165.2 95 82.1
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 5.0e-39 165.2 95 82.1
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 5.0e-39 165.2 95 82.1
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 5.0e-39 165.2 95 82.1
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 5.0e-39 165.2 95 82.1
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 6.5e-39 164.9 95 82.1
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 6.5e-39 164.9 95 82.1
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 8.4e-39 164.5 95 82.1
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 1.1e-38 164.1 95 84.2
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 1.1e-38 164.1 95 81.1
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 1.4e-38 163.7 95 81.1
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 1.4e-38 163.7 95 81.1
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.4e-38 163.7 95 85.3
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 2.5e-38 162.9 95 81.1
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 2.5e-38 162.9 95 82.1
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 4.2e-38 162.2 95 82.1
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 4.2e-38 162.2 95 83.2
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 5.5e-38 161.8 95 81.1
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 5.5e-38 161.8 95 81.1
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 7.1e-38 161.4 95 80.0
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 9.3e-38 161.0 95 84.2
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 9.3e-38 161.0 95 80.0
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 9.3e-38 161.0 95 80.0
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 9.3e-38 161.0 95 83.2
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 4.6e-37 158.7 95 81.1
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 4.6e-37 158.7 95 81.1
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 2.3e-36 156.4 141 61.7
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 7.4e-35 151.4 95 71.6
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 7.4e-35 151.4 95 73.7
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 9.7e-35 151.0 85 87.1
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.8e-34 149.4 85 85.9
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 3.1e-33 146.0 95 73.7
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 1.7e-31 140.2 85 81.2
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 6.5e-31 138.3 127 59.1
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 1.1e-30 137.5 71 91.5
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 2.5e-30 136.3 69 94.2
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 4.2e-30 135.6 76 89.5
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 5.5e-30 135.2 78 85.9
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 1.0e-28 131.0 98 65.3
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 3.9e-28 129.0 77 80.5
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 5.7e-27 125.2 66 90.9
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 7.4e-27 124.8 69 88.4
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 7.4e-27 124.8 86 74.4
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 3.7e-26 122.5 69 87.0
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.4e-25 119.8 68 85.3
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 6.9e-25 118.2 67 83.6
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 2.5e-22 109.8 70 77.1
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 2.9e-15 86.3 95 45.3
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 1.0e-12 77.8 95 44.2
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 1.7e-10 70.5 36 91.7
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 3.1e-09 66.2 49 65.3
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 5.9e-08 62.0 93 39.8
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 3.8e-07 59.3 115 36.5


User provided reference genes

Program Settings