Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A587T9 Lonicera japonica HOM05D000228 ORTHO05D036479 5.2e-76 287.7 155 100.0
Lj4P587T8 Lonicera japonica HOM05D000228 ORTHO05D036479 1.9e-22 109.8 59 100.0
Lj4P514T6 Lonicera japonica HOM05D000228 ORTHO05D004880 2.9e-18 95.9 63 82.5
Lj5P411T2 Lonicera japonica HOM05D000228 ORTHO05D036479 7.1e-17 91.3 63 79.4
Lj7A585G29 Lonicera japonica HOM05D000228 ORTHO05D004880 4.6e-16 88.6 63 76.2
Potri.003G196900 Populus trichocarpa HOM05D000228 ORTHO05D004880 6.7e-15 84.7 84 52.4
Dinv22035 Davidia involucrata HOM05D000228 ORTHO05D004880 8.7e-15 84.3 90 55.6
Sabra03G0146600 Salix brachista HOM05D000228 ORTHO05D004880 1.1e-14 84.0 84 52.4
Atru.chr12.1341 Acer truncatum HOM05D000228 ORTHO05D004880 4.3e-14 82.0 90 48.9
Haze_03043 Corylus avellana HOM05D000228 ORTHO05D004880 1.6e-13 80.1 83 49.4
Potri.001G027232 Populus trichocarpa HOM05D000228 ORTHO05D004880 2.2e-13 79.7 76 52.6
Oeu038177.1 Olea europaea HOM05D000228 ORTHO05D004880 6.3e-13 78.2 64 62.5
CANSAT56G3974 Cannabis sativa HOM05D000228 ORTHO05D004880 2.4e-12 76.3 75 52.0
CiPaw.13G013500 Carya illinoinensis HOM05D000228 ORTHO05D004880 3.1e-12 75.9 117 39.3
CAN.G1045.38 Capsicum annuum HOM05D000228 ORTHO05D004880 6.9e-12 74.7 138 37.0
Thecc.10G157200 Theobroma cacao HOM05D000228 ORTHO05D004880 6.9e-12 74.7 62 58.1
Manes.04G159600 Manihot esculenta HOM05D000228 ORTHO05D004880 9.0e-12 74.3 140 35.7
GSVIVG01013491001 Vitis vinifera HOM05D000228 ORTHO05D004880 9.0e-12 74.3 148 37.2
CSS0032728 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D004880 1.2e-11 73.9 54 68.5
Hma1.2p1_1202F.1_g266790 Hydrangea macrophylla HOM05D000228 ORTHO05D004880 1.2e-11 73.9 55 61.8
Peaxi162Scf00767g00417 Petunia axillaris HOM05D000228 ORTHO05D004880 1.2e-11 73.9 75 49.3
Solyc01g096390.4 Solanum lycopersicum HOM05D000228 ORTHO05D004880 1.2e-11 73.9 86 45.3
Sopen01g040120 Solanum pennellii HOM05D000228 ORTHO05D004880 1.2e-11 73.9 86 45.3
AUR62026863 Chenopodium quinoa HOM05D000228 ORTHO05D004880 1.5e-11 73.6 76 44.7
AUR62032652 Chenopodium quinoa HOM05D000228 ORTHO05D004880 1.5e-11 73.6 76 44.7
Actinidia21520 Actinidia chinensis HOM05D000228 ORTHO05D004880 2.0e-11 73.2 76 55.3
DCAR_022342 Daucus carota HOM05D000228 ORTHO05D004880 2.0e-11 73.2 117 41.0
Gohir.A06G175400 Gossypium hirsutum HOM05D000228 ORTHO05D004880 3.4e-11 72.4 62 53.2
Gohir.D06G185200 Gossypium hirsutum HOM05D000228 ORTHO05D004880 3.4e-11 72.4 62 53.2
Gorai.010G216600 Gossypium raimondii HOM05D000228 ORTHO05D004880 3.4e-11 72.4 62 53.2
Cc02_g30260 Coffea canephora HOM05D000228 ORTHO05D004880 4.5e-11 72.0 84 45.2
HanXRQChr01g0022531 Helianthus annuus HOM05D000228 ORTHO05D004880 4.5e-11 72.0 57 54.4
HanXRQChr15g0481481 Helianthus annuus HOM05D000228 ORTHO05D004880 4.5e-11 72.0 57 56.1
Ciclev10004129m.g Citrus clementina HOM05D000228 ORTHO05D004880 5.9e-11 71.6 74 50.0
Lsat_1_v5_gn_7_31901 Lactuca sativa HOM05D006097 ORTHO05D004880 5.9e-11 71.6 57 57.9
TAR626G0081 Trochodendron aralioides HOM05D000228 ORTHO05D004880 5.9e-11 71.6 55 58.2
Duzib114G0608 Durio zibethinus HOM05D000228 ORTHO05D004880 7.7e-11 71.2 60 55.0
SGA_v2.0_scaffold124G33613 Striga asiatica HOM05D000228 ORTHO05D004880 7.7e-11 71.2 62 59.7
EL10Ac2g02803 Beta vulgaris HOM05D000228 ORTHO05D004880 1.0e-10 70.9 61 50.8
ECA236G0597 Erigeron canadensis HOM05D000228 ORTHO05D004880 1.3e-10 70.5 43 83.7
SalBow5G3376 Salvia bowleyana HOM05D000228 ORTHO05D004880 1.3e-10 70.5 54 61.1
SalBow5G5050 Salvia bowleyana HOM05D000228 ORTHO05D004880 1.3e-10 70.5 54 61.1
vmacro12694 Vaccinium macrocarpon HOM05D000228 ORTHO05D004880 1.3e-10 70.5 54 63.0
COL.COLO4_20753 Corchorus olitorius HOM05D000228 ORTHO05D004880 1.7e-10 70.1 62 53.2
Rhsim01G0124000 Rhododendron simsii HOM05D000228 ORTHO05D004880 1.7e-10 70.1 42 85.7
Sc11g0006440 Simmondsia chinensis HOM05D000228 ORTHO05D004880 2.2e-10 69.7 42 85.7
TWI38G1715 Tripterygium wilfordii HOM05D000228 ORTHO05D004880 2.9e-10 69.3 50 74.0
Migut.B01227 Erythranthe guttata HOM05D000228 ORTHO05D004880 3.8e-10 68.9 117 39.3
Hund27778 Selenicereus undatus HOM05D000228 ORTHO05D004880 3.8e-10 68.9 42 85.7
Hund27781 Selenicereus undatus HOM05D000228 ORTHO05D004880 3.8e-10 68.9 42 85.7
Sed0005526 Sechium edule HOM05D000228 ORTHO05D004880 6.5e-10 68.2 97 40.2
TWI15G0020 Tripterygium wilfordii HOM05D000228 ORTHO05D004880 6.5e-10 68.2 50 72.0
CsaV3_5G024490 Cucumis sativus L. HOM05D000228 ORTHO05D004880 8.5e-10 67.8 76 43.4
MD02G1287600 Malus domestica HOM05D000228 ORTHO05D004880 1.1e-09 67.4 83 41.0
Sed0021971 Sechium edule HOM05D000228 ORTHO05D004880 1.1e-09 67.4 83 42.2
unitig_0.g1386 Utricularia gibba HOM05D000228 ORTHO05D004880 1.4e-09 67.0 62 51.6
arahy.Tifrunner.gnm1.ann1.50BPU8 Arachis hypogaea HOM05D000228 ORTHO05D004880 1.9e-09 66.6 43 79.1
arahy.Tifrunner.gnm1.ann1.K566NY Arachis hypogaea HOM05D000228 ORTHO05D004880 1.9e-09 66.6 43 79.1
MELO3C005153.2 Cucumis melo HOM05D000228 ORTHO05D004880 1.9e-09 66.6 76 42.1
Eucgr.J01182 Eucalyptus grandis HOM05D000228 ORTHO05D004880 1.9e-09 66.6 41 82.9
Medtr8g038990 Medicago truncatula HOM05D000228 ORTHO05D004880 1.9e-09 66.6 89 40.4
TPR.G25078 Trifolium pratense HOM05D000228 ORTHO05D004880 1.9e-09 66.6 76 43.4
AT2G40030 Arabidopsis thaliana HOM05D000228 ORTHO05D004880 2.5e-09 66.2 41 82.9
ClCG01G007520 Citrullus lanatus HOM05D000228 ORTHO05D004880 2.5e-09 66.2 83 41.0
Thhalv10016128m.g Eutrema salsugineum HOM05D000228 ORTHO05D004880 2.5e-09 66.2 41 82.9
Glyma.15G235900 Glycine max HOM05D000228 ORTHO05D004880 2.5e-09 66.2 89 40.4
VMungo1127G1028 Vigna mungo HOM05D000228 ORTHO05D004880 2.5e-09 66.2 42 81.0
BcaB02g09059 Brassica carinata HOM05D000228 ORTHO05D004880 3.2e-09 65.9 41 80.5
Prupe.2G035500 Prunus persica HOM05D000228 ORTHO05D004880 3.2e-09 65.9 41 82.9
THA.LOC104809820 Tarenaya hassleriana HOM05D000228 ORTHO05D004880 3.2e-09 65.9 41 80.5
Cpa.g.sc271.2 Carica papaya HOM05D000228 ORTHO05D004880 4.2e-09 65.5 46 78.3
RcHm_v2.0_Chr1g0324091 Rosa chinensis HOM05D000228 ORTHO05D004880 4.2e-09 65.5 41 80.5
AL4G37670 Arabidopsis lyrata HOM05D000228 ORTHO05D004880 5.5e-09 65.1 56 55.4
BcaB01g03594 Brassica carinata HOM05D000228 ORTHO05D004880 5.5e-09 65.1 41 80.5
BcaC01g05442 Brassica carinata HOM05D000228 ORTHO05D004880 5.5e-09 65.1 41 80.5
A03p22490 Brassica napus HOM05D000228 ORTHO05D004880 5.5e-09 65.1 41 80.5
C03p26640 Brassica napus HOM05D000228 ORTHO05D004880 5.5e-09 65.1 41 80.5
BolC3t15049H Brassica oleracea HOM05D000228 ORTHO05D004880 5.5e-09 65.1 41 80.5
BraA03t11476Z Brassica rapa HOM05D000228 ORTHO05D004880 5.5e-09 65.1 41 80.5
Glyma.13G196900 Glycine max HOM05D000228 ORTHO05D004880 5.5e-09 65.1 42 78.6
Phvul.011G206900 Phaseolus vulgaris HOM05D000228 ORTHO05D004880 5.5e-09 65.1 42 78.6
Sp4g22340 Schrenkiella parvula HOM05D000228 ORTHO05D004880 5.5e-09 65.1 41 80.5
Lalb_Chr01g0007761 Lupinus albus HOM05D000228 ORTHO05D004880 7.2e-09 64.7 42 78.6
MD07G1039700 Malus domestica HOM05D000228 ORTHO05D004880 7.2e-09 64.7 138 30.4
Ah.10g030560 Amaranthus hybridus HOM05D000228 ORTHO05D004880 9.4e-09 64.3 42 78.6
Ah.10g030570 Amaranthus hybridus HOM05D000228 ORTHO05D004880 9.4e-09 64.3 42 78.6
FvH4_7g03040 Fragaria vesca HOM05D000228 ORTHO05D004880 9.4e-09 64.3 41 78.0
FAN01G1291 Fragaria x ananassa HOM05D000228 ORTHO05D004880 9.4e-09 64.3 41 78.0
FAN03G2523 Fragaria x ananassa HOM05D000228 ORTHO05D004880 9.4e-09 64.3 41 78.0
FAN06G4504 Fragaria x ananassa HOM05D000228 ORTHO05D004880 9.4e-09 64.3 41 78.0
FAN10G2682 Fragaria x ananassa HOM05D000228 ORTHO05D004880 9.4e-09 64.3 41 78.0
Nitab4.5_0000307g0250 Nicotiana tabacum HOM05D000228 ORTHO05D004880 9.4e-09 64.3 40 85.0
Nitab4.5_0004955g0050 Nicotiana tabacum HOM05D000228 ORTHO05D004880 9.4e-09 64.3 40 85.0
Carub.0004s2219 Capsella rubella HOM05D000228 ORTHO05D004880 1.2e-08 63.9 66 48.5
Ca_23957_v3 Cicer arietinum L. HOM05D000228 ORTHO05D004880 1.2e-08 63.9 42 78.6
Ca_30885_v3 Cicer arietinum L. HOM05D005112 ORTHO05D006681 1.2e-08 63.9 42 78.6
Psat4g144400 Pisum sativum HOM05D000228 ORTHO05D004880 1.2e-08 63.9 41 80.5
Aa31LG5G19570 Aethionema arabicum HOM05D000228 ORTHO05D004880 2.1e-08 63.2 41 80.5
Lalb_Chr03g0032731 Lupinus albus HOM05D000228 ORTHO05D004880 2.1e-08 63.2 124 31.5
PSO063G0693 Papaver somniferum HOM05D000228 ORTHO05D004880 2.1e-08 63.2 55 50.9
PSO782G2240 Papaver somniferum HOM05D000228 ORTHO05D004880 2.1e-08 63.2 55 50.9
PGR044G0122 Punica granatum HOM05D000228 ORTHO05D004880 2.7e-08 62.8 41 78.0
Lj3g0006268 Lotus japonicus HOM05D000228 ORTHO05D004880 3.6e-08 62.4 39 82.1
TPR.G27818 Trifolium pratense HOM05D000228 ORTHO05D004880 7.9e-08 61.2 41 78.0
CARHR134990 Cardamine hirsuta HOM05D000228 ORTHO05D004880 1.0e-07 60.8 38 84.2
Nn6g31494 Nelumbo nucifera HOM05D000228 ORTHO05D004880 1.0e-07 60.8 40 75.0
Lj3g0014961 Lotus japonicus HOM05D000228 ORTHO05D004880 1.4e-07 60.5 42 73.8
Aqoxy6G01013 Aquilegia oxysepala HOM05D000228 ORTHO05D004880 3.9e-07 58.9 62 41.9
Aqoxy7G04198 Aquilegia oxysepala HOM05D000228 ORTHO05D004880 3.9e-07 58.9 117 32.5
MBI05_g03761_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 2.0e-06 56.6 36 80.6
MBI14_g46519_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 4.3e-06 55.5 36 80.6
MBI05_g23415_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D004880 9.7e-06 54.3 35 80.0


User provided reference genes

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