Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 4.6e-124 448.0 235 100.0
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 1.4e-101 373.2 234 82.1
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 1.2e-100 370.2 224 83.9
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 3.0e-99 365.5 225 83.1
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 2.5e-98 362.5 224 81.2
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 7.3e-98 360.9 225 82.7
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 9.6e-98 360.5 225 82.2
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 1.3e-97 360.1 236 78.8
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 2.1e-97 359.4 235 78.7
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 2.8e-97 359.0 225 81.3
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 3.6e-97 358.6 224 82.1
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 1.1e-96 357.1 225 80.4
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 1.8e-96 356.3 225 80.0
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 2.4e-96 355.9 234 77.8
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 2.4e-96 355.9 225 81.3
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 4.0e-96 355.1 227 81.1
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 5.3e-96 354.8 234 79.1
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 6.9e-96 354.4 225 81.3
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 1.2e-95 353.6 225 79.6
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 1.5e-95 353.2 225 81.3
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 2.0e-95 352.8 225 79.1
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 2.6e-95 352.4 235 78.3
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 2.6e-95 352.4 236 77.5
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 7.6e-95 350.9 235 76.6
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 9.9e-95 350.5 224 79.9
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 1.3e-94 350.1 225 80.0
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 2.2e-94 349.4 234 76.1
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 4.9e-94 348.2 225 78.7
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 4.9e-94 348.2 225 77.3
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 6.4e-94 347.8 234 76.5
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 6.4e-94 347.8 235 76.6
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 1.4e-93 346.7 232 76.3
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 3.2e-93 345.5 236 73.7
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 3.2e-93 345.5 225 76.9
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 4.2e-93 345.1 236 73.7
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 4.2e-93 345.1 236 76.7
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 4.2e-93 345.1 225 79.1
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 7.1e-93 344.4 234 73.9
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 7.1e-93 344.4 222 79.7
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 1.6e-92 343.2 225 78.7
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 2.1e-92 342.8 234 75.6
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 2.1e-92 342.8 225 78.7
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 2.7e-92 342.4 229 78.2
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 3.5e-92 342.0 238 76.9
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 4.6e-92 341.7 232 75.4
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 4.6e-92 341.7 225 78.7
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 6.0e-92 341.3 225 77.3
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 6.0e-92 341.3 228 75.9
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 7.9e-92 340.9 225 76.9
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 7.9e-92 340.9 234 76.1
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 1.7e-91 339.7 235 74.9
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 1.7e-91 339.7 225 76.9
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 2.3e-91 339.3 225 79.1
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 2.3e-91 339.3 228 76.3
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 3.0e-91 339.0 228 75.4
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 3.9e-91 338.6 225 76.9
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 6.6e-91 337.8 225 75.6
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 1.1e-90 337.0 225 76.4
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 1.1e-90 337.0 226 74.8
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 1.5e-90 336.7 230 75.7
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 2.5e-90 335.9 225 75.6
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 4.3e-90 335.1 229 75.5
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 9.6e-90 334.0 224 76.8
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 1.3e-89 333.6 228 75.0
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 1.6e-89 333.2 229 76.0
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 2.8e-89 332.4 225 75.6
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 2.8e-89 332.4 229 76.4
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 8.1e-89 330.9 238 74.4
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 1.1e-88 330.5 228 75.9
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 3.1e-88 328.9 225 75.1
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 4.0e-88 328.6 230 75.2
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 5.3e-88 328.2 227 74.9
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 9.0e-88 327.4 238 73.9
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 2.6e-87 325.9 254 68.9
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 2.6e-87 325.9 236 70.8
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 3.4e-87 325.5 216 76.9
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 3.4e-87 325.5 244 70.5
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 4.5e-87 325.1 238 71.8
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 9.9e-87 323.9 244 70.1
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 9.9e-87 323.9 326 58.3
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 1.7e-86 323.2 237 72.6
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 6.4e-86 321.2 228 75.0
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 1.1e-85 320.5 237 70.0
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 1.9e-85 319.7 227 74.4
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 1.6e-84 316.6 186 86.0
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 6.0e-84 314.7 229 73.8
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 1.0e-83 313.9 225 70.7
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 1.3e-83 313.5 218 73.9
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 3.9e-83 312.0 225 73.8
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 5.1e-83 311.6 235 68.9
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 5.1e-83 311.6 234 70.5
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 8.7e-83 310.8 234 70.5
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 4.3e-82 308.5 223 74.0
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 5.6e-82 308.1 225 72.4
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 8.1e-81 304.3 234 67.5
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 8.1e-81 304.3 204 76.5
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 1.4e-80 303.5 229 69.4
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 5.8e-79 298.1 237 68.8
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 1.6e-73 280.0 186 75.8
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 2.6e-71 272.7 226 66.4
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 3.9e-67 258.8 225 62.7
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 2.5e-66 256.1 145 86.9
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 9.7e-66 254.2 148 83.8
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 3.7e-65 252.3 261 57.9
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 1.1e-64 250.8 235 62.6
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 4.5e-63 245.4 225 56.4
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 5.7e-58 228.4 133 85.7
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 5.7e-58 228.4 230 53.0
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 4.1e-56 222.2 131 84.7
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 1.2e-55 220.7 235 51.9
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 2.1e-52 209.9 220 52.7
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 1.0e-51 207.6 155 74.2
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 8.0e-44 181.4 128 69.5
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 7.0e-40 168.3 125 67.2
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 5.0e-38 162.2 156 51.3
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 8.3e-33 144.8 101 77.2
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 2.3e-27 126.7 99 67.7
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 3.0e-27 126.3 233 37.8
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 2.6e-26 123.2 120 56.7
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 5.9e-23 112.1 114 57.0
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 8.6e-22 108.2 79 72.2
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 8.0e-20 101.7 63 82.5
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 3.0e-19 99.8 101 55.4
BcaC08g43234 Brassica carinata HOM05D006016 ORTHO05D007553 1.5e-18 97.4 71 63.4
Lj9C654T3 Lonicera japonica HOM05D006016 ORTHO05D007553 2.7e-15 86.7 47 97.9
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 2.3e-14 83.6 70 64.3
QL09p050966 Quercus lobata HOM05D001484 ORTHO05D001564 2.0e-07 60.5 35 68.6
BolC6t35694H Brassica oleracea HOM05D006016 ORTHO05D007553 7.8e-07 58.5 62 58.1


User provided reference genes

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