Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C1029G11 Lonicera japonica HOM05D004298 ORTHO05D006236 0.0e+00 1410.6 709 100.0
Lj2C1029T7 Lonicera japonica HOM05D004298 ORTHO05D006236 0.0e+00 1292.7 743 87.9
Hma1.2p1_1031F.1_g250050 Hydrangea macrophylla HOM05D004298 ORTHO05D006236 0.0e+00 1268.4 736 86.1
CSS0023686 Camellia sinensis var. sinensis HOM05D004298 ORTHO05D006236 0.0e+00 1266.5 741 86.4
Manes.04G021700 Manihot esculenta HOM05D004298 ORTHO05D006236 0.0e+00 1261.9 741 85.3
Peaxi162Scf00270g00819 Petunia axillaris HOM05D004298 ORTHO05D006236 0.0e+00 1261.5 741 86.0
Manes.11G144700 Manihot esculenta HOM05D004298 ORTHO05D006236 0.0e+00 1260.7 741 85.4
CSS0023657 Camellia sinensis var. sinensis HOM05D004298 ORTHO05D006236 0.0e+00 1260.0 740 85.3
CSS0037274 Camellia sinensis var. sinensis HOM05D004298 ORTHO05D006236 0.0e+00 1260.0 740 85.3
QL01p022296 Quercus lobata HOM05D004298 ORTHO05D006236 0.0e+00 1257.7 737 86.2
Thecc.09G340000 Theobroma cacao HOM05D004298 ORTHO05D006236 0.0e+00 1255.4 741 85.0
Nitab4.5_0000650g0220 Nicotiana tabacum HOM05D004298 ORTHO05D006236 0.0e+00 1253.4 741 85.7
GSVIVG01025182001 Vitis vinifera HOM05D004298 ORTHO05D006236 0.0e+00 1252.3 741 84.3
CiPaw.13G112600 Carya illinoinensis HOM05D004298 ORTHO05D006236 0.0e+00 1251.5 741 84.9
DCAR_015537 Daucus carota HOM05D004298 ORTHO05D006236 0.0e+00 1251.5 741 84.9
Duzib168G1617 Durio zibethinus HOM05D004298 ORTHO05D006236 0.0e+00 1249.6 741 84.6
HanXRQChr07g0197541 Helianthus annuus HOM05D004298 ORTHO05D006236 0.0e+00 1249.6 741 85.0
HanXRQChr14g0452871 Helianthus annuus HOM05D004298 ORTHO05D006236 0.0e+00 1249.2 741 84.2
Cpa.g.sc216.13 Carica papaya HOM05D004298 ORTHO05D006236 0.0e+00 1247.6 741 83.9
Gorai.004G228600 Gossypium raimondii HOM05D004298 ORTHO05D006236 0.0e+00 1247.6 741 84.5
Lsat_1_v5_gn_2_98360 Lactuca sativa HOM05D004298 ORTHO05D006236 0.0e+00 1247.3 740 84.2
Gohir.D08G214700 Gossypium hirsutum HOM05D004298 ORTHO05D006236 0.0e+00 1246.9 741 84.3
MD11G1135000 Malus domestica HOM05D004298 ORTHO05D006236 0.0e+00 1246.5 742 84.6
Actinidia20454 Actinidia chinensis HOM05D004298 ORTHO05D006236 0.0e+00 1245.7 741 85.2
Prupe.6G101000 Prunus persica HOM05D004298 ORTHO05D006236 0.0e+00 1245.0 740 83.9
SalBow3G4399 Salvia bowleyana HOM05D004298 ORTHO05D006236 0.0e+00 1244.6 742 84.6
Nn2g10781 Nelumbo nucifera HOM05D004298 ORTHO05D006236 0.0e+00 1243.8 741 83.8
arahy.Tifrunner.gnm1.ann1.VBZF8N Arachis hypogaea HOM05D004298 ORTHO05D006236 0.0e+00 1243.0 739 84.8
VMungo1080G1181 Vigna mungo HOM05D004298 ORTHO05D006236 0.0e+00 1242.6 740 83.4
Cc01_g11160 Coffea canephora HOM05D004298 ORTHO05D006236 0.0e+00 1241.9 741 84.8
arahy.Tifrunner.gnm1.ann1.ETHX4E Arachis hypogaea HOM05D004298 ORTHO05D006236 0.0e+00 1241.1 739 84.7
TPR.G11486 Trifolium pratense HOM05D004298 ORTHO05D006236 0.0e+00 1241.1 740 84.1
CAN.G631.24 Capsicum annuum HOM05D004298 ORTHO05D006236 0.0e+00 1239.6 741 84.6
Gohir.A08G197500 Gossypium hirsutum HOM05D004298 ORTHO05D006236 0.0e+00 1239.6 747 83.7
PGR102G1912 Punica granatum HOM05D004298 ORTHO05D006236 0.0e+00 1239.6 740 83.9
Potri.009G013400 Populus trichocarpa HOM05D004298 ORTHO05D006236 0.0e+00 1239.2 740 83.4
Solyc11g069380.2 Solanum lycopersicum HOM05D004298 ORTHO05D006236 0.0e+00 1238.8 741 84.3
MD03G1117300 Malus domestica HOM05D004298 ORTHO05D006236 0.0e+00 1238.4 741 83.8
Sopen11g028100 Solanum pennellii HOM05D004298 ORTHO05D006236 0.0e+00 1237.6 741 84.1
CANSAT54G2863 Cannabis sativa HOM05D004298 ORTHO05D006236 0.0e+00 1237.2 737 84.7
Medtr2g094160 Medicago truncatula HOM05D004298 ORTHO05D006236 0.0e+00 1237.2 740 83.8
TAR636G1671 Trochodendron aralioides HOM05D004298 ORTHO05D006236 0.0e+00 1237.2 742 83.3
Ca_01417_v3 Cicer arietinum L. HOM05D004298 ORTHO05D006236 0.0e+00 1236.9 740 83.8
Rhsim01G0217200 Rhododendron simsii HOM05D004298 ORTHO05D006236 0.0e+00 1236.5 735 84.2
TAR636G3405 Trochodendron aralioides HOM05D004298 ORTHO05D006236 0.0e+00 1235.3 742 83.2
RcHm_v2.0_Chr5g0059471 Rosa chinensis HOM05D004298 ORTHO05D006236 0.0e+00 1234.9 741 83.4
Sabra09G0008100 Salix brachista HOM05D004298 ORTHO05D006236 0.0e+00 1233.4 741 83.3
Psat5g278240 Pisum sativum HOM05D004298 ORTHO05D006236 0.0e+00 1233.0 740 83.0
FAN25G3839 Fragaria x ananassa HOM05D004298 ORTHO05D006236 0.0e+00 1232.6 741 83.1
PGSC0003DMG400008050 Solanum tuberosum HOM05D004298 ORTHO05D006236 0.0e+00 1232.6 741 84.6
FAN11G2723 Fragaria x ananassa HOM05D004298 ORTHO05D006236 0.0e+00 1232.2 741 83.3
FvH4_3g32460 Fragaria vesca HOM05D004298 ORTHO05D006236 0.0e+00 1231.1 741 83.1
Ciclev10027881m.g Citrus clementina HOM05D004298 ORTHO05D006236 0.0e+00 1229.5 742 83.7
Lj3g0003128 Lotus japonicus HOM05D004298 ORTHO05D006236 0.0e+00 1228.8 768 80.9
CiPaw.14G080300 Carya illinoinensis HOM05D004298 ORTHO05D006236 0.0e+00 1228.4 743 83.2
FAN21G2260 Fragaria x ananassa HOM05D004298 ORTHO05D006236 0.0e+00 1228.4 741 82.7
Glyma.13G326400 Glycine max HOM05D004298 ORTHO05D006236 0.0e+00 1227.6 743 83.2
FAN16G0818 Fragaria x ananassa HOM05D004298 ORTHO05D006236 0.0e+00 1227.2 741 82.7
MSTRG.17806 Avicennia marina HOM05D004298 ORTHO05D006236 0.0e+00 1226.8 743 82.8
Oeu002865.1 Olea europaea HOM05D004298 ORTHO05D006236 0.0e+00 1226.5 744 84.4
Phvul.005G135800 Phaseolus vulgaris HOM05D004298 ORTHO05D006236 0.0e+00 1226.5 740 82.3
Migut.N02606 Erythranthe guttata HOM05D004298 ORTHO05D006236 0.0e+00 1224.2 744 83.5
TWI79G1123 Tripterygium wilfordii HOM05D004298 ORTHO05D006236 0.0e+00 1223.8 741 82.5
ECA238G4788 Erigeron canadensis HOM05D004298 ORTHO05D006236 0.0e+00 1223.4 741 82.5
Eucgr.B02495 Eucalyptus grandis HOM05D004298 ORTHO05D006236 0.0e+00 1218.4 741 83.1
TWI31G1183 Tripterygium wilfordii HOM05D004298 ORTHO05D006236 0.0e+00 1218.4 736 83.0
Oeu059093.1 Olea europaea HOM05D004298 ORTHO05D006236 0.0e+00 1217.6 743 83.0
Potri.004G210400 Populus trichocarpa HOM05D004298 ORTHO05D006236 0.0e+00 1217.6 736 82.5
MSTRG.12319 Avicennia marina HOM05D004298 ORTHO05D006236 0.0e+00 1217.2 743 83.2
Haze_23837 Corylus avellana HOM05D004298 ORTHO05D006236 0.0e+00 1215.3 763 81.5
Haze_23839 Corylus avellana HOM05D004298 ORTHO05D006236 0.0e+00 1215.3 763 81.5
Dinv32749 Davidia involucrata HOM05D004298 ORTHO05D006236 0.0e+00 1211.4 707 85.9
Sed0018088 Sechium edule HOM05D004298 ORTHO05D006236 0.0e+00 1210.7 740 82.0
Lalb_Chr14g0374701 Lupinus albus HOM05D004298 ORTHO05D006236 0.0e+00 1209.1 738 82.0
AT5G60600 Arabidopsis thaliana HOM05D004298 ORTHO05D006236 0.0e+00 1206.0 736 81.9
Sabra04G0142000 Salix brachista HOM05D004298 ORTHO05D006236 0.0e+00 1206.0 745 81.3
CARHR274260 Cardamine hirsuta HOM05D004298 ORTHO05D006236 0.0e+00 1204.5 736 81.9
Sp6g22170 Schrenkiella parvula HOM05D004298 ORTHO05D006236 0.0e+00 1203.7 736 81.7
AL8G37190 Arabidopsis lyrata HOM05D004298 ORTHO05D006236 0.0e+00 1203.3 736 81.7
Lalb_Chr03g0027311 Lupinus albus HOM05D004298 ORTHO05D006236 0.0e+00 1203.0 743 81.2
THA.LOC104810855 Tarenaya hassleriana HOM05D004298 ORTHO05D006236 0.0e+00 1203.0 737 81.7
Carub.0008s2128 Capsella rubella HOM05D004298 ORTHO05D006236 0.0e+00 1202.6 736 81.8
EL10Ac9g22507 Beta vulgaris HOM05D004298 ORTHO05D006236 0.0e+00 1201.8 740 81.4
Thhalv10012774m.g Eutrema salsugineum HOM05D004298 ORTHO05D006236 0.0e+00 1200.7 737 81.4
PSO339G0771 Papaver somniferum HOM05D004298 ORTHO05D006236 0.0e+00 1200.3 744 81.0
Aa31LG1G12580 Aethionema arabicum HOM05D004298 ORTHO05D006236 0.0e+00 1199.9 736 80.7
PSO384G0735 Papaver somniferum HOM05D004298 ORTHO05D006236 0.0e+00 1199.5 744 81.2
AUR62024990 Chenopodium quinoa HOM05D004298 ORTHO05D006236 0.0e+00 1198.7 740 81.2
Aqoxy1G01246 Aquilegia oxysepala HOM05D004298 ORTHO05D006236 0.0e+00 1198.3 736 81.7
BraA10t43856Z Brassica rapa HOM05D004298 ORTHO05D006236 0.0e+00 1198.0 736 81.2
MELO3C005061.2 Cucumis melo HOM05D004298 ORTHO05D006236 0.0e+00 1197.6 740 80.8
CsaV3_1G012820 Cucumis sativus L. HOM05D004298 ORTHO05D006236 0.0e+00 1197.6 740 80.9
A10p17790 Brassica napus HOM05D004298 ORTHO05D006236 0.0e+00 1195.3 736 81.0
ATR0115G030 Amborella trichopoda HOM05D004298 ORTHO05D006236 0.0e+00 1192.9 744 80.8
Ah.01g014360 Amaranthus hybridus HOM05D004298 ORTHO05D006236 0.0e+00 1192.6 741 81.1
Lalb_Chr24g0394611 Lupinus albus HOM05D004298 ORTHO05D006236 0.0e+00 1190.3 733 81.6
BcaB08g36355 Brassica carinata HOM05D004298 ORTHO05D006236 0.0e+00 1189.5 737 81.0
vmacro14439 Vaccinium macrocarpon HOM05D004298 ORTHO05D006236 0.0e+00 1188.7 822 75.3
C09p53300 Brassica napus HOM05D004298 ORTHO05D006236 0.0e+00 1186.8 736 81.1
arahy.Tifrunner.gnm1.ann1.068WZH Arachis hypogaea HOM05D004298 ORTHO05D006236 0.0e+00 1186.0 737 80.9
arahy.Tifrunner.gnm1.ann1.X2DMBM Arachis hypogaea HOM05D004298 ORTHO05D006236 0.0e+00 1185.6 738 80.8
DCAR_006060 Daucus carota HOM05D004298 ORTHO05D006236 0.0e+00 1185.6 707 84.4
TAR633G1103 Trochodendron aralioides HOM05D004298 ORTHO05D006236 0.0e+00 1184.5 711 83.7
MBI07_g19314_MAGBIO Magnolia biondii HOM05D004298 ORTHO05D006236 0.0e+00 1183.3 710 83.8
BcaC04g19719 Brassica carinata HOM05D004298 ORTHO05D006236 0.0e+00 1177.2 736 80.4
Hund08138 Selenicereus undatus HOM05D004298 ORTHO05D006236 0.0e+00 1176.8 741 79.6
ClCG03G002170 Citrullus lanatus HOM05D004298 ORTHO05D006236 0.0e+00 1175.2 803 75.0
CDE02G3870 Ceratophyllum demersum HOM05D004298 ORTHO05D006236 0.0e+00 1172.9 747 79.0
unitig_27.g25060 Utricularia gibba HOM05D004298 ORTHO05D006236 0.0e+00 1166.8 720 81.5
AUR62039630 Chenopodium quinoa HOM05D004298 ORTHO05D006236 0.0e+00 1165.2 756 78.3
BolC9t58204H Brassica oleracea HOM05D004298 ORTHO05D006236 0.0e+00 1160.2 772 77.1
Os02g0603800 Oryza sativa ssp. japonica HOM05D004298 ORTHO05D006236 0.0e+00 1158.3 744 78.2
Actinidia03730 Actinidia chinensis HOM05D004298 ORTHO05D006236 0.0e+00 1154.4 736 81.5
Zm00001eb246530 Zea mays HOM05D004298 ORTHO05D006236 0.0e+00 1151.7 747 78.0
SEGI_29082 Sequoiadendron giganteum HOM05D004298 ORTHO05D006236 0.0e+00 1139.4 736 77.4
Atru.BG.119.p Acer truncatum HOM05D004298 ORTHO05D006236 0.0e+00 1124.4 669 84.8
Glyma.12G173200 Glycine max HOM05D004298 ORTHO05D006236 0.0e+00 1115.1 674 83.4
CDE08G0282 Ceratophyllum demersum HOM05D004298 ORTHO05D006236 0.0e+00 1112.1 747 75.4
SGA_v2.0_scaffold2G00894 Striga asiatica HOM05D004298 ORTHO05D006236 0.0e+00 1111.3 746 78.0
Mapoly0048s0084 Marchantia polymorpha HOM05D004298 ORTHO05D006236 7.2e-306 1053.5 739 72.3
Pp3c19_16320 Physcomitrium patens HOM05D004298 ORTHO05D006236 1.9e-303 1045.4 744 71.0
SMO146G0141 Selaginella moellendorffii HOM05D004298 ORTHO05D006236 3.7e-302 1041.2 684 75.3
HPP92_014714 Vanilla planifolia HOM05D004298 ORTHO05D006236 3.7e-302 1041.2 632 82.3
Sc06g0010150 Simmondsia chinensis HOM05D004298 ORTHO05D006236 4.8e-302 1040.8 613 84.7
Pp3c22_14940 Physcomitrium patens HOM05D004298 ORTHO05D006236 1.6e-297 1025.8 740 69.6
Pp3c21_19070 Physcomitrium patens HOM05D004298 ORTHO05D006236 2.9e-291 1005.0 686 72.7
AagrBONN_evm.TU.Sc2ySwM_117.2437 Anthoceros agrestis HOM05D004298 ORTHO05D006236 6.8e-272 940.6 637 74.4
Cre12.g490350 Chlamydomonas reinhardtii HOM05D004298 ORTHO05D006236 6.0e-228 794.7 664 60.2
Nitab4.5_0006333g0040 Nicotiana tabacum HOM05D004298 ORTHO05D006236 1.3e-222 776.9 525 79.0
MCO10G060 Micromonas commoda HOM05D004298 ORTHO05D006236 1.0e-211 740.7 676 57.1
Hma1.2p1_0391F.1_g142750 Hydrangea macrophylla HOM05D004298 ORTHO05D006236 1.8e-211 740.0 523 74.4
PRCOL_00002263 Prasinoderma coloniale HOM05D004298 ORTHO05D006236 3.3e-202 709.1 644 58.7
COL.COLO4_18338 Corchorus olitorius HOM05D004298 ORTHO05D006236 5.1e-195 685.3 421 82.2
Nitab4.5_0012814g0010 Nicotiana tabacum HOM05D004298 ORTHO05D006236 9.1e-184 647.9 741 51.6
Nitab4.5_0011114g0030 Nicotiana tabacum HOM05D004298 ORTHO05D006236 5.9e-183 645.2 736 51.5
Atru.chr3.3635 Acer truncatum HOM05D004298 ORTHO05D006236 4.7e-180 635.6 464 71.3
SGA_v2.0_scaffold84G26546 Striga asiatica HOM05D004298 ORTHO05D006236 7.3e-133 478.8 432 62.0
HanXRQChr13g0402271 Helianthus annuus HOM05D004298 ORTHO05D006236 2.0e-122 444.1 235 92.3
Hma1.2p1_1031F.1_g250040 Hydrangea macrophylla HOM05D004298 ORTHO05D006236 6.5e-89 332.8 191 85.3
CBR_g51121 Chara braunii HOM05D004298 ORTHO05D006236 1.9e-85 321.2 546 39.0
C09p53310 Brassica napus HOM05D004298 ORTHO05D006236 5.9e-74 283.1 151 90.1
Nitab4.5_0005621g0180 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.5e-53 215.3 106 98.1
HanXRQChr02g0034121 Helianthus annuus HOM05D004298 ORTHO05D006236 6.3e-52 209.9 104 97.1
Ca_28980_v3 Cicer arietinum L. HOM05D004298 ORTHO05D007370 1.3e-41 175.6 272 39.0
TAR636G3504 Trochodendron aralioides HOM05D004298 ORTHO05D023169 4.9e-36 157.1 98 75.5
HanXRQChr12g0375701 Helianthus annuus HOM05D004298 ORTHO05D006236 2.3e-30 138.3 72 91.7
TAR636G1311 Trochodendron aralioides HOM05D004298 ORTHO05D023169 1.3e-25 122.5 80 72.5
CAN.G907.27 Capsicum annuum HOM05D002478 ORTHO05D020307 1.7e-25 122.1 73 79.5
SEGI_39119 Sequoiadendron giganteum HOM05D004298 ORTHO05D006236 4.7e-23 114.0 69 75.4
Nn1g05516 Nelumbo nucifera HOM05D001057 ORTHO05D002028 1.4e-19 102.4 70 72.9
SGA_v2.0_scaffold12G06316 Striga asiatica HOM05D004298 ORTHO05D023169 1.2e-18 99.4 85 58.8
arahy.Tifrunner.gnm1.ann1.BZC8YM Arachis hypogaea HOM05D004298 ORTHO05D000893 2.0e-18 98.6 108 52.8
COL.COLO4_18339 Corchorus olitorius HOM05D004298 ORTHO05D160745 1.3e-17 95.9 69 63.8
Hma1.2p1_1050F.1_g251950 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 1.3e-17 95.9 75 65.3
MBI12_g33358_MAGBIO Magnolia biondii HOM05D004298 ORTHO05D025791 3.9e-17 94.4 45 95.6
Hma1.2p1_0105F.1_g050690 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 1.1e-16 92.8 75 62.7
SGA_v2.0_scaffold290G47319 Striga asiatica HOM05D004298 ORTHO05D023169 4.3e-16 90.9 85 54.1
Peaxi162Scf00218g02111 Petunia axillaris HOM05D004298 ORTHO05D008833 3.6e-15 87.8 49 93.9
CAN.G53.21 Capsicum annuum HOM05D002478 ORTHO05D020307 5.2e-14 84.0 81 58.0
Cc00_g31230 Coffea canephora HOM05D004298 ORTHO05D006236 5.2e-14 84.0 47 85.1
SEGI_37191 Sequoiadendron giganteum HOM05D004298 ORTHO05D050955 6.8e-14 83.6 214 32.2
MBI12_g31227_MAGBIO Magnolia biondii HOM05D004298 ORTHO05D025791 2.0e-13 82.0 41 92.7
CAN.G548.17 Capsicum annuum HOM05D002478 ORTHO05D005706 9.2e-11 73.2 50 66.0
SEGI_14813 Sequoiadendron giganteum HOM05D016845 ORTHO05D018122 2.7e-10 71.6 41 80.5
TAR381G0461 Trochodendron aralioides HOM05D004298 ORTHO05D023169 3.3e-08 64.7 47 63.8
SGA_v2.0_scaffold28G11882 Striga asiatica HOM05D000239 ORTHO05D000484 9.5e-08 63.2 82 40.2
TAR156G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 9.5e-08 63.2 46 63.0
TAR381G1634 Trochodendron aralioides HOM05D004298 ORTHO05D023169 1.2e-07 62.8 45 64.4
TAR625G1187 Trochodendron aralioides HOM05D006212 ORTHO05D008245 2.8e-07 61.6 33 87.9
CAN.G970.17 Capsicum annuum HOM05D004298 ORTHO05D115446 8.9e-06 56.6 58 55.2


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