Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 1.9e-167 592.4 295 100.0
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 5.0e-152 541.2 296 91.2
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 2.5e-151 538.9 296 91.2
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 2.0e-148 529.3 296 89.5
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 4.4e-148 528.1 294 88.8
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 7.4e-148 527.3 295 88.8
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 1.7e-147 526.2 292 87.7
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 3.9e-141 505.0 323 80.5
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 7.4e-140 500.7 289 86.5
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 2.7e-129 465.7 295 78.0
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 2.5e-127 459.1 291 78.4
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 1.2e-126 456.8 294 77.6
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 2.3e-125 452.6 293 77.1
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 6.8e-125 451.1 294 76.2
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 2.6e-124 449.1 294 76.9
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 1.7e-123 446.4 295 75.6
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 3.7e-123 445.3 292 76.0
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 1.1e-122 443.7 293 74.4
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 1.4e-122 443.4 294 76.2
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 4.1e-122 441.8 294 74.1
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 5.4e-122 441.4 293 74.4
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 7.0e-122 441.0 294 75.2
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 2.0e-121 439.5 293 73.7
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 3.8e-120 435.3 296 73.0
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 1.6e-118 429.9 293 73.7
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 3.6e-118 428.7 293 71.0
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 4.7e-118 428.3 295 73.2
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 4.7e-118 428.3 308 71.4
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 3.0e-117 425.6 293 70.0
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 8.9e-117 424.1 298 70.5
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 8.9e-117 424.1 298 70.1
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 8.9e-117 424.1 274 77.4
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 9.8e-116 420.6 297 70.4
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 1.3e-115 420.2 297 70.4
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.3e-115 420.2 315 69.8
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 1.3e-115 420.2 297 70.4
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 1.7e-115 419.9 300 70.3
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 3.7e-115 418.7 294 69.7
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 4.9e-115 418.3 330 67.0
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 1.1e-114 417.2 298 70.1
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.4e-114 416.8 315 69.2
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 1.8e-114 416.4 297 70.0
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 2.4e-114 416.0 293 71.7
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 5.4e-114 414.8 295 71.9
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 5.4e-114 414.8 300 69.7
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 9.2e-114 414.1 300 69.0
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.5e-113 412.1 270 75.2
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 1.0e-112 410.6 296 72.0
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 1.0e-112 410.6 298 69.1
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 1.0e-112 410.6 296 68.6
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 1.0e-112 410.6 291 70.8
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 1.3e-112 410.2 305 69.5
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 1.7e-112 409.8 294 70.1
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 2.3e-112 409.5 296 68.6
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 2.3e-112 409.5 298 69.1
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 2.9e-112 409.1 293 68.9
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 8.6e-112 407.5 291 70.1
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 1.1e-111 407.1 297 69.7
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 1.2e-110 403.7 298 67.8
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 2.1e-110 402.9 296 69.3
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 4.7e-110 401.7 297 70.0
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 5.8e-108 394.8 301 67.1
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 1.3e-107 393.7 294 67.0
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 1.3e-107 393.7 296 68.2
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 1.7e-107 393.3 293 68.6
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 8.3e-107 391.0 297 68.0
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 1.1e-106 390.6 296 68.2
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 4.1e-106 388.7 296 67.9
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 5.4e-106 388.3 296 67.6
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 7.0e-106 387.9 297 68.0
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 9.2e-106 387.5 288 69.1
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 2.0e-105 386.3 295 66.8
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 4.6e-105 385.2 295 66.4
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 5.0e-104 381.7 254 73.2
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 6.6e-104 381.3 295 65.8
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.9e-103 379.8 316 63.9
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 3.3e-103 379.0 279 69.2
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 4.3e-103 378.6 305 63.3
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.6e-102 376.7 281 68.7
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 2.0e-100 369.8 293 64.5
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 5.8e-100 368.2 285 67.7
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 1.7e-99 366.7 291 62.2
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 2.2e-99 366.3 277 66.8
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 2.4e-98 362.8 297 64.6
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 7.0e-98 361.3 242 74.0
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 1.3e-96 357.1 298 60.4
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 4.4e-92 342.0 320 58.8
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 2.4e-90 336.3 305 60.0
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 7.1e-90 334.7 249 67.9
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 3.0e-88 329.3 247 68.8
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 6.6e-88 328.2 208 75.0
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 2.4e-85 319.7 294 60.5
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 3.4e-84 315.8 209 75.1
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 6.4e-83 311.6 242 68.6
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 4.2e-82 308.9 244 66.8
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 7.1e-82 308.1 274 61.7
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 3.9e-80 302.4 176 85.2
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 6.6e-80 301.6 216 70.8
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 2.5e-79 299.7 300 52.3
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 4.3e-79 298.9 221 66.5
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 5.6e-79 298.5 299 50.5
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 9.9e-76 287.7 434 44.5
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 5.1e-72 275.4 162 85.2
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 5.6e-71 271.9 249 59.0
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 4.5e-68 262.3 215 65.6
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 2.9e-67 259.6 312 50.0
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 1.9e-66 256.9 313 46.3
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 2.3e-64 250.0 239 59.0
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 3.9e-64 249.2 253 57.3
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 3.3e-63 246.1 149 75.8
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 9.6e-63 244.6 174 72.4
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 7.9e-57 224.9 189 64.0
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 1.0e-56 224.6 221 57.5
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 3.0e-56 223.0 111 92.8
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 3.9e-56 222.6 234 57.3
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 2.1e-54 216.9 122 85.2
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 7.6e-52 208.4 201 59.2
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 1.9e-42 177.2 129 65.1
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 2.0e-39 167.2 95 85.3
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 5.7e-39 165.6 287 38.3
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 7.2e-34 148.7 93 82.8
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 9.4e-34 148.3 96 71.9
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 1.6e-33 147.5 340 32.6
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 6.1e-33 145.6 80 81.2
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 1.2e-28 131.3 153 53.6
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 3.8e-27 126.3 70 84.3
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 8.5e-27 125.2 123 59.3
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 3.2e-26 123.2 157 47.1
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 3.6e-25 119.8 246 34.6
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 4.7e-25 119.4 133 46.6
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 2.7e-12 77.0 103 49.5
TPR.G32 Trifolium pratense HOM05D005614 ORTHO05D006759 3.5e-12 76.6 31 100.0
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.1e-10 71.6 91 50.5
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.4e-08 64.7 87 48.3
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.3e-06 58.2 54 53.7


User provided reference genes

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