Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0002875 Lotus japonicus HOM05D004364 ORTHO05D236196 6.4e-131 470.7 229 100.0
Lj3g0027191 Lotus japonicus HOM05D004364 ORTHO05D006299 1.5e-47 193.7 270 46.3
Phvul.011G156100 Phaseolus vulgaris HOM05D004364 ORTHO05D006299 2.9e-43 179.5 270 44.1
Glyma.12G146600 Glycine max HOM05D004364 ORTHO05D006299 5.6e-42 175.3 270 43.3
Lalb_Chr06g0175311 Lupinus albus HOM05D004364 ORTHO05D006299 1.2e-41 174.1 270 44.4
Glyma.06G255000 Glycine max HOM05D004364 ORTHO05D006299 1.6e-41 173.7 270 43.7
Nitab4.5_0000092g0270 Nicotiana tabacum HOM05D004364 ORTHO05D006299 2.1e-41 173.3 265 44.2
arahy.Tifrunner.gnm1.ann1.B7TU6S Arachis hypogaea HOM05D004364 ORTHO05D006299 6.1e-41 171.8 255 42.4
QL08p017220 Quercus lobata HOM05D004364 ORTHO05D006299 6.1e-41 171.8 269 43.1
THA.LOC104816919 Tarenaya hassleriana HOM05D004364 ORTHO05D006299 6.1e-41 171.8 263 44.5
COL.COLO4_09498 Corchorus olitorius HOM05D004364 ORTHO05D006299 3.1e-40 169.5 243 44.4
Duzib170G0088 Durio zibethinus HOM05D004364 ORTHO05D006299 3.1e-40 169.5 268 43.3
FAN21G1304 Fragaria x ananassa HOM05D004364 ORTHO05D006299 4.0e-40 169.1 243 44.4
Nn1g06827 Nelumbo nucifera HOM05D004364 ORTHO05D006299 5.2e-40 168.7 255 43.5
Lalb_Chr02g0159341 Lupinus albus HOM05D004364 ORTHO05D006299 6.8e-40 168.3 270 43.7
Gohir.D08G031200 Gossypium hirsutum HOM05D004364 ORTHO05D006299 8.9e-40 167.9 268 42.5
GSVIVG01014465001 Vitis vinifera HOM05D004364 ORTHO05D006299 8.9e-40 167.9 270 43.0
CsaV3_3G044300 Cucumis sativus L. HOM05D004364 ORTHO05D006299 1.2e-39 167.5 270 43.0
Gohir.A08G020600 Gossypium hirsutum HOM05D004364 ORTHO05D006299 1.2e-39 167.5 268 42.5
MD11G1234900 Malus domestica HOM05D004364 ORTHO05D006299 1.2e-39 167.5 270 42.6
PSO832G2674 Papaver somniferum HOM05D004364 ORTHO05D006299 1.2e-39 167.5 270 42.6
BraA05t21700Z Brassica rapa HOM05D004364 ORTHO05D006299 1.5e-39 167.2 264 40.2
TPR.G32881 Trifolium pratense HOM05D004364 ORTHO05D006299 1.5e-39 167.2 270 41.5
BcaB06g26128 Brassica carinata HOM05D004364 ORTHO05D006299 2.0e-39 166.8 263 40.7
Peaxi162Scf01216g00070 Petunia axillaris HOM05D004364 ORTHO05D006299 2.6e-39 166.4 256 43.0
arahy.Tifrunner.gnm1.ann1.19RIMK Arachis hypogaea HOM05D004364 ORTHO05D006299 3.4e-39 166.0 270 41.5
CANSAT11G0334 Cannabis sativa HOM05D004364 ORTHO05D006299 4.4e-39 165.6 270 41.5
MELO3C018182.2 Cucumis melo HOM05D004364 ORTHO05D006299 5.8e-39 165.2 270 42.6
PSO210G4872 Papaver somniferum HOM05D004364 ORTHO05D006299 5.8e-39 165.2 270 41.9
Haze_09550 Corylus avellana HOM05D004364 ORTHO05D006299 7.5e-39 164.9 269 41.3
BolC5t33082H Brassica oleracea HOM05D004364 ORTHO05D006299 9.8e-39 164.5 264 39.8
Sed0018829 Sechium edule HOM05D004364 ORTHO05D006299 9.8e-39 164.5 270 42.2
TAR626G1658 Trochodendron aralioides HOM05D004364 ORTHO05D006299 9.8e-39 164.5 269 41.6
BcaC05g28303 Brassica carinata HOM05D004364 ORTHO05D006299 1.3e-38 164.1 255 40.8
Nitab4.5_0001386g0060 Nicotiana tabacum HOM05D004364 ORTHO05D006299 1.3e-38 164.1 266 41.4
Ca_01795_v3 Cicer arietinum L. HOM05D004364 ORTHO05D006299 1.7e-38 163.7 269 40.5
C05p43630 Brassica napus HOM05D004364 ORTHO05D006299 2.2e-38 163.3 263 39.9
Cfa020489 Carpinus fangiana HOM05D004364 ORTHO05D006299 2.2e-38 163.3 269 41.6
Gorai.004G028800 Gossypium raimondii HOM05D004364 ORTHO05D006299 2.2e-38 163.3 268 41.8
MD03G1217200 Malus domestica HOM05D004364 ORTHO05D006299 2.2e-38 163.3 270 41.9
Cc05_g12790 Coffea canephora HOM05D004364 ORTHO05D006299 2.9e-38 162.9 256 43.8
Eucgr.F01066 Eucalyptus grandis HOM05D004364 ORTHO05D006299 2.9e-38 162.9 266 43.6
RcHm_v2.0_Chr5g0036241 Rosa chinensis HOM05D004364 ORTHO05D006299 2.9e-38 162.9 269 40.5
FAN16G3737 Fragaria x ananassa HOM05D004364 ORTHO05D006299 3.7e-38 162.5 273 40.7
Medtr2g081180 Medicago truncatula HOM05D004364 ORTHO05D006299 3.7e-38 162.5 270 40.7
Prupe.4G192200 Prunus persica HOM05D004364 ORTHO05D006299 3.7e-38 162.5 270 41.5
PGR083G1074 Punica granatum HOM05D004364 ORTHO05D006299 3.7e-38 162.5 265 43.4
A05p28190 Brassica napus HOM05D004364 ORTHO05D006299 4.9e-38 162.2 263 39.5
BolC3t17413H Brassica oleracea HOM05D004364 ORTHO05D006299 4.9e-38 162.2 264 40.9
TWI39G0400 Tripterygium wilfordii HOM05D004364 ORTHO05D006299 4.9e-38 162.2 269 42.0
FvH4_3g21160 Fragaria vesca HOM05D004364 ORTHO05D006299 8.3e-38 161.4 269 40.9
Atru.chr2.2938 Acer truncatum HOM05D004364 ORTHO05D006299 1.1e-37 161.0 268 41.0
BraA03t13338Z Brassica rapa HOM05D004364 ORTHO05D006299 1.1e-37 161.0 264 40.9
Psat5g247520 Pisum sativum HOM05D004364 ORTHO05D006299 1.1e-37 161.0 272 40.8
BcaB04g19118 Brassica carinata HOM05D004364 ORTHO05D006299 1.9e-37 160.2 263 40.7
Potri.011G125800 Populus trichocarpa HOM05D004364 ORTHO05D006299 1.9e-37 160.2 269 42.4
Thhalv10020069m.g Eutrema salsugineum HOM05D004364 ORTHO05D006299 2.4e-37 159.8 264 39.0
Potri.001G408800 Populus trichocarpa HOM05D004364 ORTHO05D006299 2.4e-37 159.8 269 42.0
CiPaw.11G178500 Carya illinoinensis HOM05D004364 ORTHO05D006299 3.2e-37 159.5 262 41.6
HanXRQChr13g0407291 Helianthus annuus HOM05D004364 ORTHO05D006299 3.2e-37 159.5 270 40.7
Manes.03G117700 Manihot esculenta HOM05D004364 ORTHO05D006299 3.2e-37 159.5 269 40.1
Aa31LG8G7430 Aethionema arabicum HOM05D004364 ORTHO05D006299 5.4e-37 158.7 256 39.8
EL10Ac4g08041 Beta vulgaris HOM05D004364 ORTHO05D006299 5.4e-37 158.7 255 42.0
AUR62029293 Chenopodium quinoa HOM05D004364 ORTHO05D006299 5.4e-37 158.7 250 43.2
FAN11G0387 Fragaria x ananassa HOM05D004364 ORTHO05D006299 5.4e-37 158.7 273 39.9
Os01g0177200 Oryza sativa ssp. japonica HOM05D004364 ORTHO05D006299 5.4e-37 158.7 255 40.0
BcaC01g03545 Brassica carinata HOM05D004364 ORTHO05D006299 7.0e-37 158.3 263 40.3
C03p51230 Brassica napus HOM05D004364 ORTHO05D006299 7.0e-37 158.3 263 40.3
FAN25G2975 Fragaria x ananassa HOM05D004364 ORTHO05D006299 7.0e-37 158.3 269 40.5
HanXRQChr03g0076071 Helianthus annuus HOM05D004364 ORTHO05D006299 7.0e-37 158.3 266 40.6
Thecc.07G069000 Theobroma cacao HOM05D004364 ORTHO05D006299 7.0e-37 158.3 267 39.3
AL3G34510 Arabidopsis lyrata HOM05D004364 ORTHO05D006299 9.2e-37 157.9 267 39.3
Cpa.g.sc12.20 Carica papaya HOM05D004364 ORTHO05D006299 9.2e-37 157.9 263 43.3
Ciclev10007478m.g Citrus clementina HOM05D004364 ORTHO05D006299 1.2e-36 157.5 268 40.7
Ah.04g165340 Amaranthus hybridus HOM05D004364 ORTHO05D006299 1.6e-36 157.1 247 42.5
Aqoxy1G03944 Aquilegia oxysepala HOM05D004364 ORTHO05D006299 1.6e-36 157.1 266 40.2
A03p41850 Brassica napus HOM05D004364 ORTHO05D006299 1.6e-36 157.1 263 40.3
Sp3g18670 Schrenkiella parvula HOM05D004364 ORTHO05D006299 1.6e-36 157.1 263 40.3
Sc16g0006700 Simmondsia chinensis HOM05D004364 ORTHO05D006299 1.6e-36 157.1 259 39.4
CDE01G0428 Ceratophyllum demersum HOM05D004364 ORTHO05D006299 2.0e-36 156.8 258 41.1
Lj8C162G4 Lonicera japonica HOM05D004364 ORTHO05D006299 2.0e-36 156.8 270 39.6
HPP92_005995 Vanilla planifolia HOM05D004364 ORTHO05D006299 2.0e-36 156.8 264 40.9
AUR62041167 Chenopodium quinoa HOM05D004364 ORTHO05D006299 2.7e-36 156.4 250 43.6
Sabra11G0111700 Salix brachista HOM05D004364 ORTHO05D006299 6.0e-36 155.2 269 40.9
CSS0001646 Camellia sinensis var. sinensis HOM05D004364 ORTHO05D006299 7.8e-36 154.8 270 39.3
CSS0013066 Camellia sinensis var. sinensis HOM05D004364 ORTHO05D006299 7.8e-36 154.8 270 39.3
CAN.G162.111 Capsicum annuum HOM05D004364 ORTHO05D006299 7.8e-36 154.8 267 40.1
SEGI_22005 Sequoiadendron giganteum HOM05D004364 ORTHO05D006299 7.8e-36 154.8 270 38.9
Aqoxy5G02435 Aquilegia oxysepala HOM05D004364 ORTHO05D006299 1.0e-35 154.5 261 41.8
CARHR096430 Cardamine hirsuta HOM05D004364 ORTHO05D006299 1.0e-35 154.5 263 39.9
Solyc07g063650.4 Solanum lycopersicum HOM05D004364 ORTHO05D006299 1.0e-35 154.5 267 39.3
Sopen07g031830 Solanum pennellii HOM05D004364 ORTHO05D006299 1.0e-35 154.5 267 39.3
AT3G20630 Arabidopsis thaliana HOM05D004364 ORTHO05D006299 2.3e-35 153.3 267 39.3
ECA240G1374 Erigeron canadensis HOM05D004364 ORTHO05D006299 3.0e-35 152.9 270 39.3
Zm00001eb336890 Zea mays HOM05D004364 ORTHO05D006299 3.0e-35 152.9 263 38.4
DCAR_008692 Daucus carota HOM05D004364 ORTHO05D006299 3.9e-35 152.5 271 38.7
Dinv22351 Davidia involucrata HOM05D004364 ORTHO05D006299 6.6e-35 151.8 267 40.1
Migut.H01895 Erythranthe guttata HOM05D004364 ORTHO05D006299 1.1e-34 151.0 269 39.0
Hma1.2p1_0015F.1_g010280 Hydrangea macrophylla HOM05D004364 ORTHO05D006299 7.3e-34 148.3 269 40.1
MSTRG.12935 Avicennia marina HOM05D004364 ORTHO05D006299 1.2e-33 147.5 270 38.5
Carub.0003s2061 Capsella rubella HOM05D004364 ORTHO05D006299 2.8e-33 146.4 263 39.2
SGA_v2.0_scaffold9G04963 Striga asiatica HOM05D004364 ORTHO05D006299 1.1e-32 144.4 260 40.0
SalBow7G1127 Salvia bowleyana HOM05D004364 ORTHO05D006299 2.3e-32 143.3 270 38.1
RhsimUnG0257500 Rhododendron simsii HOM05D004364 ORTHO05D006299 3.1e-32 142.9 285 38.2
Oeu060533.1 Olea europaea HOM05D004364 ORTHO05D006299 6.8e-32 141.7 269 39.8
ClCG11G018570 Citrullus lanatus HOM05D004364 ORTHO05D006299 2.0e-31 140.2 347 34.6
Hund02178 Selenicereus undatus HOM05D004364 ORTHO05D006299 2.2e-30 136.7 229 40.2
ATR1132G023 Amborella trichopoda HOM05D004364 ORTHO05D006299 2.9e-30 136.3 318 34.6
Mapoly0028s0083 Marchantia polymorpha HOM05D004364 ORTHO05D006299 2.7e-28 129.8 271 35.1
Pp3c19_17130 Physcomitrium patens HOM05D004364 ORTHO05D006299 3.9e-27 125.9 277 33.9
Lsat_1_v5_gn_0_5341 Lactuca sativa HOM05D004364 ORTHO05D006299 4.3e-26 122.5 247 37.7
Manes.15G081800 Manihot esculenta HOM05D004364 ORTHO05D006299 5.6e-26 122.1 308 32.8
SMO347G0465 Selaginella moellendorffii HOM05D004364 ORTHO05D006299 5.2e-24 115.5 250 32.8
Nitab4.5_0000297g0190 Nicotiana tabacum HOM05D004364 ORTHO05D006299 1.2e-23 114.4 237 37.1
CBR_g17932 Chara braunii HOM05D004364 ORTHO05D006299 2.9e-22 109.8 269 32.7
vmacro09573 Vaccinium macrocarpon HOM05D004364 ORTHO05D006299 3.3e-18 96.3 86 53.5
unitig_21.g20140 Utricularia gibba HOM05D004364 ORTHO05D006299 2.1e-17 93.6 211 37.4
VMungo1127G0244 Vigna mungo HOM05D004364 ORTHO05D006299 8.1e-17 91.7 95 53.7
Lj1g0005584 Lotus japonicus HOM05D004364 ORTHO05D006299 5.8e-15 85.5 72 62.5
MCO15G328 Micromonas commoda HOM05D004364 ORTHO05D006299 1.3e-14 84.3 255 27.5
PRCOL_00003961 Prasinoderma coloniale HOM05D004364 ORTHO05D006299 4.6e-12 75.9 273 25.3
TAR624G0100 Trochodendron aralioides HOM05D004364 ORTHO05D006299 4.6e-12 75.9 202 32.7
MD15G1178100 Malus domestica HOM05D004364 ORTHO05D246722 5.1e-11 72.4 75 56.0
Cre02.g080350 Chlamydomonas reinhardtii HOM05D004364 ORTHO05D006299 2.1e-09 67.0 128 34.4
GSVIVG01015716001 Vitis vinifera HOM05D004364 ORTHO05D439286 2.1e-09 67.0 64 59.4
Haze_26164 Corylus avellana HOM05D004364 ORTHO05D006299 8.1e-09 65.1 240 22.9


User provided reference genes

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