Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A25G7 Lonicera japonica HOM05D000113 ORTHO05D008110 3.5e-64 248.1 120 100.0
Atru.chr5.1152 Acer truncatum HOM05D000113 ORTHO05D008110 6.3e-13 77.8 131 42.0
Thecc.01G299800 Theobroma cacao HOM05D000113 ORTHO05D008110 1.8e-12 76.3 151 36.4
Duzib138G1325 Durio zibethinus HOM05D000113 ORTHO05D008110 2.4e-12 75.9 132 39.4
ECA236G2215 Erigeron canadensis HOM05D000113 ORTHO05D008110 4.1e-12 75.1 132 42.4
COL.COLO4_23351 Corchorus olitorius HOM05D000113 ORTHO05D008110 5.4e-12 74.7 68 58.8
Rhsim01G0284800 Rhododendron simsii HOM05D000113 ORTHO05D008110 7.0e-12 74.3 140 39.3
MSTRG.18154 Avicennia marina HOM05D000113 ORTHO05D008110 1.2e-11 73.6 131 40.5
Dinv19697 Davidia involucrata HOM05D000113 ORTHO05D008110 1.2e-11 73.6 132 40.9
Actinidia24825 Actinidia chinensis HOM05D000113 ORTHO05D008110 2.7e-11 72.4 132 38.6
Peaxi162Scf00399g00810 Petunia axillaris HOM05D000113 ORTHO05D008110 2.7e-11 72.4 132 40.9
CSS0020045 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D008110 4.5e-11 71.6 132 37.1
Gohir.D12G134400 Gossypium hirsutum HOM05D000113 ORTHO05D008110 4.5e-11 71.6 151 36.4
Gorai.008G145400 Gossypium raimondii HOM05D000113 ORTHO05D008110 4.5e-11 71.6 151 36.4
Gohir.A12G130600 Gossypium hirsutum HOM05D000113 ORTHO05D008110 5.9e-11 71.2 151 37.1
Lj2A1194T51 Lonicera japonica HOM05D000113 ORTHO05D008110 7.7e-11 70.9 132 40.2
TAR636G2876 Trochodendron aralioides HOM05D000113 ORTHO05D008110 7.7e-11 70.9 132 40.2
HanXRQChr04g0114511 Helianthus annuus HOM05D000113 ORTHO05D008110 1.3e-10 70.1 132 40.9
AUR62008633 Chenopodium quinoa HOM05D000113 ORTHO05D008110 1.7e-10 69.7 59 61.0
AUR62033138 Chenopodium quinoa HOM05D000113 ORTHO05D008110 1.7e-10 69.7 59 61.0
Prupe.8G260900 Prunus persica HOM05D000113 ORTHO05D008110 1.7e-10 69.7 151 34.4
DCAR_002827 Daucus carota HOM05D000113 ORTHO05D008110 2.9e-10 68.9 128 42.2
vmacro15006 Vaccinium macrocarpon HOM05D000113 ORTHO05D008110 2.9e-10 68.9 57 63.2
HanXRQChr06g0163801 Helianthus annuus HOM05D000113 ORTHO05D008110 3.8e-10 68.6 132 40.2
MD03G1287700 Malus domestica HOM05D000113 ORTHO05D008110 5.0e-10 68.2 151 34.4
Lsat_1_v5_gn_8_163500 Lactuca sativa HOM05D000113 ORTHO05D008110 8.6e-10 67.4 132 39.4
SGA_v2.0_scaffold2G01396 Striga asiatica HOM05D000113 ORTHO05D008110 8.6e-10 67.4 131 37.4
Oeu046683.2 Olea europaea HOM05D000113 ORTHO05D008110 1.5e-09 66.6 57 61.4
Rhsim01G0284900 Rhododendron simsii HOM05D000113 ORTHO05D008110 1.5e-09 66.6 134 38.8
Solyc06g009070.3 Solanum lycopersicum HOM05D000113 ORTHO05D008110 1.5e-09 66.6 132 38.6
Sopen06g003870 Solanum pennellii HOM05D000113 ORTHO05D008110 1.5e-09 66.6 132 38.6
Nitab4.5_0002470g0060 Nicotiana tabacum HOM05D000113 ORTHO05D008110 1.9e-09 66.2 132 38.6
SalBow3G0505 Salvia bowleyana HOM05D000113 ORTHO05D008110 3.3e-09 65.5 132 37.1
CiPaw.07G108300 Carya illinoinensis HOM05D000113 ORTHO05D008110 4.2e-09 65.1 57 59.6
QL12p028521 Quercus lobata HOM05D000113 ORTHO05D008110 5.5e-09 64.7 151 35.8
Nn3g21480 Nelumbo nucifera HOM05D000113 ORTHO05D008110 7.2e-09 64.3 152 35.5
Nitab4.5_0005805g0010 Nicotiana tabacum HOM05D000113 ORTHO05D008110 7.2e-09 64.3 132 37.9
CAN.G1989.5 Capsicum annuum HOM05D000113 ORTHO05D008110 9.5e-09 63.9 132 37.9
FvH4_2g25691 Fragaria vesca HOM05D000113 ORTHO05D008110 9.5e-09 63.9 49 63.3
RcHm_v2.0_Chr6g0293951 Rosa chinensis HOM05D000113 ORTHO05D008110 9.5e-09 63.9 132 36.4
FAN24G2368 Fragaria x ananassa HOM05D000113 ORTHO05D008110 1.2e-08 63.5 49 61.2
Psat6g166080 Pisum sativum HOM05D000113 ORTHO05D008110 1.2e-08 63.5 129 38.8
Medtr1g088590 Medicago truncatula HOM05D000113 ORTHO05D008110 1.6e-08 63.2 129 38.8
PSO407G0393 Papaver somniferum HOM05D000113 ORTHO05D008110 1.6e-08 63.2 133 38.3
PGR044G1807 Punica granatum HOM05D000113 ORTHO05D008110 1.6e-08 63.2 57 54.4
TWI23G0215 Tripterygium wilfordii HOM05D000113 ORTHO05D008110 1.6e-08 63.2 53 60.4
EL10Ac7g17516 Beta vulgaris HOM05D000113 ORTHO05D008110 2.1e-08 62.8 57 56.1
Ca_10340_v3 Cicer arietinum L. HOM05D000113 ORTHO05D008110 2.1e-08 62.8 132 38.6
PSO170G4966 Papaver somniferum HOM05D000113 ORTHO05D008110 2.1e-08 62.8 133 38.3
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 2.1e-08 62.8 132 35.6
TAR365G0742 Trochodendron aralioides HOM05D000113 ORTHO05D008110 2.1e-08 62.8 133 38.3
Lj5g0009328 Lotus japonicus HOM05D000113 ORTHO05D008110 2.8e-08 62.4 57 56.1
PSO170G4996 Papaver somniferum HOM05D000113 ORTHO05D008110 2.8e-08 62.4 133 38.3
Hund18149 Selenicereus undatus HOM05D000113 ORTHO05D008110 3.6e-08 62.0 132 34.8
Aqoxy5G00751 Aquilegia oxysepala HOM05D000113 ORTHO05D008110 8.0e-08 60.8 132 37.9
Migut.B01151 Erythranthe guttata HOM05D000113 ORTHO05D008110 8.0e-08 60.8 131 33.6
Migut.D00214 Erythranthe guttata HOM05D000113 ORTHO05D008110 8.0e-08 60.8 131 33.6
Ciclev10018660m.g Citrus clementina HOM05D000113 ORTHO05D008110 1.0e-07 60.5 132 39.4
Cc01_g20800 Coffea canephora HOM05D000113 ORTHO05D008110 1.0e-07 60.5 152 32.9
FAN15G1622 Fragaria x ananassa HOM05D000113 ORTHO05D008110 1.0e-07 60.5 49 61.2
FAN20G1487 Fragaria x ananassa HOM05D000113 ORTHO05D008110 1.0e-07 60.5 49 61.2
TPR.G33994 Trifolium pratense HOM05D000113 ORTHO05D008110 1.0e-07 60.5 57 59.6
Cfa005918 Carpinus fangiana HOM05D000113 ORTHO05D008110 1.4e-07 60.1 132 37.9
Ah.08g213060 Amaranthus hybridus HOM05D000113 ORTHO05D008110 1.8e-07 59.7 132 32.6
Cpa.g.sc9.265 Carica papaya HOM05D000113 ORTHO05D008110 1.8e-07 59.7 68 45.6
Potri.017G031800 Populus trichocarpa HOM05D000113 ORTHO05D008110 1.8e-07 59.7 132 35.6
Sabra17G0020300 Salix brachista HOM05D000113 ORTHO05D008110 1.8e-07 59.7 57 54.4
Haze_04932 Corylus avellana HOM05D000113 ORTHO05D008110 2.3e-07 59.3 131 37.4
Sed0019854 Sechium edule HOM05D000113 ORTHO05D008110 2.3e-07 59.3 57 56.1
Sc24g0003800 Simmondsia chinensis HOM05D000113 ORTHO05D008110 4.0e-07 58.5 128 33.6
GSVIVG01027995001 Vitis vinifera HOM05D000113 ORTHO05D008110 5.2e-07 58.2 57 56.1
Manes.01G218500 Manihot esculenta HOM05D000113 ORTHO05D008110 6.8e-07 57.8 133 35.3
Carub.0004s3040 Capsella rubella HOM05D000113 ORTHO05D008110 8.9e-07 57.4 48 62.5
Eucgr.K03485 Eucalyptus grandis HOM05D000113 ORTHO05D008110 3.4e-06 55.5 57 54.4
unitig_22.g5242 Utricularia gibba HOM05D000113 ORTHO05D008110 3.4e-06 55.5 59 50.8
Lalb_Chr06g0163501 Lupinus albus HOM05D000113 ORTHO05D008110 4.4e-06 55.1 62 46.8
CARHR143070 Cardamine hirsuta HOM05D000113 ORTHO05D008110 5.7e-06 54.7 48 60.4
AL4G47250 Arabidopsis lyrata HOM05D000113 ORTHO05D008110 7.5e-06 54.3 48 60.4
AT2G47680 Arabidopsis thaliana HOM05D000113 ORTHO05D008110 9.8e-06 53.9 48 60.4
BcaB02g08754 Brassica carinata HOM05D000113 ORTHO05D008110 9.8e-06 53.9 131 32.8
BcaNung06419 Brassica carinata HOM05D000113 ORTHO05D008110 9.8e-06 53.9 131 32.8


User provided reference genes

Program Settings