Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 0.0e+00 1128.2 573 100.0
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 2.6e-221 772.3 498 77.7
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 6.6e-217 757.7 501 76.2
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 1.6e-215 753.1 501 76.0
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 1.7e-212 743.0 500 73.8
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 3.7e-212 741.9 512 72.5
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 9.2e-211 737.3 500 73.2
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 1.2e-210 736.9 558 70.1
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 1.5e-208 729.9 501 73.9
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 2.8e-207 725.7 501 73.9
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 4.7e-207 724.9 506 73.3
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 1.8e-206 723.0 483 74.7
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 2.6e-205 719.2 490 74.3
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 4.1e-203 711.8 468 77.1
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 8.6e-201 704.1 441 80.7
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 2.1e-199 699.5 534 68.5
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 6.2e-199 698.0 505 70.3
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 1.1e-198 697.2 504 72.6
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 4.0e-198 695.3 502 70.9
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 7.5e-197 691.0 505 70.9
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 2.2e-196 689.5 503 71.8
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 6.4e-196 688.0 502 71.1
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 2.4e-195 686.0 504 70.8
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 5.4e-195 684.9 505 70.1
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 2.3e-193 679.5 524 68.1
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 3.9e-193 678.7 501 69.7
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 3.9e-193 678.7 517 70.6
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 1.5e-192 676.8 512 69.1
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 2.5e-192 676.0 494 69.8
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 3.3e-192 675.6 508 69.3
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 9.5e-192 674.1 503 69.2
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 2.8e-191 672.5 527 67.6
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 6.2e-191 671.4 512 68.4
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 8.1e-191 671.0 524 67.6
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 1.4e-190 670.2 527 67.6
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.4e-190 669.5 527 67.4
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 3.1e-190 669.1 528 66.7
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 4.0e-190 668.7 496 70.2
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 1.5e-189 666.8 507 68.6
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 4.4e-189 665.2 538 66.0
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 3.8e-188 662.1 504 69.2
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 1.9e-187 659.8 464 72.4
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 2.4e-187 659.4 466 72.3
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 6.0e-186 654.8 502 68.3
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 3.9e-185 652.1 504 67.9
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 3.9e-185 652.1 504 66.9
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 6.6e-185 651.4 523 65.8
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 1.9e-184 649.8 559 64.2
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 4.3e-184 648.7 495 68.1
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 9.6e-184 647.5 505 67.3
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 2.1e-183 646.4 523 66.5
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 4.7e-183 645.2 469 71.0
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 4.7e-183 645.2 489 69.5
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 8.1e-183 644.4 505 66.5
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 1.8e-182 643.3 451 73.4
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 3.1e-182 642.5 500 67.0
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 1.3e-180 637.1 502 68.5
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 1.7e-180 636.7 506 66.8
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 4.9e-180 635.2 485 69.1
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 1.9e-179 633.3 505 66.3
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 2.4e-179 632.9 506 66.4
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 1.9e-176 623.2 508 64.2
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 3.3e-176 622.5 482 67.4
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 8.1e-175 617.8 488 67.6
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 1.2e-173 614.0 479 67.2
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 2.0e-173 613.2 490 65.9
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 2.6e-173 612.8 479 67.0
CANSAT35G0447 Cannabis sativa HOM05D005980 ORTHO05D007618 4.5e-173 612.1 511 64.0
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 9.9e-173 610.9 498 65.7
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 2.2e-172 609.8 502 64.1
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 2.2e-172 609.8 477 67.3
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 2.2e-172 609.8 477 67.3
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 1.1e-171 607.4 480 65.6
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 1.1e-171 607.4 549 62.3
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 1.1e-171 607.4 494 65.0
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 3.2e-171 605.9 512 63.7
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 4.2e-171 605.5 506 62.3
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 9.3e-171 604.4 482 66.2
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 2.1e-170 603.2 506 62.1
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 6.0e-170 601.7 480 65.6
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 1.3e-169 600.5 481 65.9
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 8.7e-169 597.8 509 62.7
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 4.3e-168 595.5 483 65.0
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 1.3e-167 594.0 532 60.7
vmacro03427 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 2.4e-166 589.7 428 69.9
Sc05g0005970 Simmondsia chinensis HOM05D005980 ORTHO05D007618 2.6e-165 586.3 409 72.6
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 4.5e-165 585.5 485 63.1
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 4.5e-165 585.5 485 64.1
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 2.2e-164 583.2 492 63.2
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 1.6e-162 577.0 468 65.4
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 3.5e-162 575.9 481 62.6
ECA247G3302 Erigeron canadensis HOM05D005980 ORTHO05D007618 4.9e-156 555.4 448 63.2
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 9.7e-152 541.2 431 65.7
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 1.5e-149 533.9 485 62.3
Zm00001eb152010 Zea mays HOM05D005980 ORTHO05D007618 8.2e-143 511.5 487 57.7
HPP92_001893 Vanilla planifolia HOM05D005980 ORTHO05D007618 1.7e-103 380.9 364 56.0
Hma1.2p1_0586F.1_g183820 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 2.2e-103 380.6 267 71.9
MD05G1278700 Malus domestica HOM05D005980 ORTHO05D007618 2.5e-99 367.1 297 66.0
MBI02_g18932_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 3.0e-92 343.6 268 66.4
AagrBONN_evm.TU.Sc2ySwM_228.94 Anthoceros agrestis HOM05D005980 ORTHO05D007618 7.3e-83 312.4 449 43.2
CDE01G0059 Ceratophyllum demersum HOM05D005980 ORTHO05D007618 3.7e-79 300.1 275 60.7
Cpa.g.sc17.56 Carica papaya HOM05D005980 ORTHO05D007618 3.0e-76 290.4 160 82.5
Mapoly0061s0053 Marchantia polymorpha HOM05D005980 ORTHO05D007618 4.3e-75 286.6 422 41.0
Cpa.g.sc17.57 Carica papaya HOM05D005980 ORTHO05D007618 1.7e-71 274.6 235 63.4
Cpa.g.c47879 Carica papaya HOM05D005980 ORTHO05D007618 3.1e-65 253.8 197 68.0
Pp3c3_26950 Physcomitrium patens HOM05D005980 ORTHO05D007618 6.4e-63 246.1 512 34.2
Pp3c10_12300 Physcomitrium patens HOM05D005980 ORTHO05D007618 1.1e-62 245.4 374 39.0
SGA_v2.0_scaffold230G43391 Striga asiatica HOM05D005980 ORTHO05D007618 2.0e-56 224.6 125 80.8
SGA_v2.0_scaffold6G03478 Striga asiatica HOM05D005980 ORTHO05D007618 2.9e-55 220.7 125 81.6
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 5.1e-52 209.9 149 72.5
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 2.0e-48 198.0 266 45.1
Lsat_1_v5_gn_1_94041 Lactuca sativa HOM05D005980 ORTHO05D007618 3.2e-46 190.7 183 53.0
CBR_g48045 Chara braunii HOM05D005980 ORTHO05D007618 1.6e-45 188.3 249 41.0
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 6.0e-45 186.4 169 60.4
MD05G1278800 Malus domestica HOM05D005980 ORTHO05D007618 1.8e-33 148.3 80 82.5
SEGI_30301 Sequoiadendron giganteum HOM05D005980 ORTHO05D007618 3.2e-30 137.5 219 40.2
Cpa.g.sc17.55 Carica papaya HOM05D005980 ORTHO05D007618 6.3e-26 123.2 110 66.4
HanXRQChr10g0301121 Helianthus annuus HOM05D005980 ORTHO05D007618 2.9e-23 114.4 86 64.0
Glyma.15G091200 Glycine max HOM05D005980 ORTHO05D007618 1.2e-21 109.0 97 61.9
vmacro03428 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 6.1e-21 106.7 101 60.4
Actinidia33673 Actinidia chinensis HOM05D005980 ORTHO05D007618 1.0e-20 105.9 191 41.9
MBI02_g26594_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 8.8e-20 102.8 83 68.7
Haze_05663 Corylus avellana HOM05D005980 ORTHO05D007618 2.0e-16 91.7 101 57.4
Lsat_1_v5_gn_1_94021 Lactuca sativa HOM05D005980 ORTHO05D007618 2.5e-14 84.7 141 43.3
Actinidia33672 Actinidia chinensis HOM05D005980 ORTHO05D007618 5.5e-14 83.6 78 61.5
MD05G1278900 Malus domestica HOM05D005980 ORTHO05D007618 1.2e-13 82.4 67 67.2
arahy.Tifrunner.gnm1.ann1.MPA65D Arachis hypogaea HOM05D005980 ORTHO05D007618 2.1e-13 81.6 50 70.0
Lsat_1_v5_gn_7_71901 Lactuca sativa HOM05D002457 ORTHO05D005750 6.1e-13 80.1 85 49.4
MSTRG.16269 Avicennia marina HOM05D005980 ORTHO05D007618 1.1e-11 75.9 45 68.9
Cpa.g.c48158 Carica papaya HOM05D005980 ORTHO05D007618 1.5e-06 58.9 32 75.0


User provided reference genes

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