Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr23g0275171 Lupinus albus HOM05D005339 ORTHO05D006561 2.7e-162 575.5 330 100.0
Lalb_Chr11g0072011 Lupinus albus HOM05D005339 ORTHO05D006561 1.0e-153 547.0 321 96.3
Glyma.05G234700 Glycine max HOM05D005339 ORTHO05D006561 1.5e-144 516.5 321 90.0
Lj4g0026543 Lotus japonicus HOM05D005339 ORTHO05D006561 7.3e-144 514.2 324 89.8
arahy.Tifrunner.gnm1.ann1.RMHT0B Arachis hypogaea HOM05D005339 ORTHO05D006561 9.5e-144 513.8 321 91.3
Glyma.08G042200 Glycine max HOM05D005339 ORTHO05D006561 1.4e-142 510.0 323 89.8
Ciclev10028803m.g Citrus clementina HOM05D005339 ORTHO05D006561 5.2e-142 508.1 321 84.4
Actinidia20485 Actinidia chinensis HOM05D005339 ORTHO05D006561 3.4e-141 505.4 321 88.2
arahy.Tifrunner.gnm1.ann1.UV505Z Arachis hypogaea HOM05D005339 ORTHO05D006561 1.3e-140 503.4 337 86.9
Manes.04G078200 Manihot esculenta HOM05D005339 ORTHO05D006561 1.7e-140 503.1 321 88.8
Thecc.02G066900 Theobroma cacao HOM05D005339 ORTHO05D006561 1.7e-140 503.1 322 88.8
THA.LOC104807785 Tarenaya hassleriana HOM05D005339 ORTHO05D006561 2.2e-140 502.7 321 87.5
Rhsim11G0187800 Rhododendron simsii HOM05D005339 ORTHO05D006561 4.9e-140 501.5 321 87.2
Gohir.D02G224500 Gossypium hirsutum HOM05D005339 ORTHO05D006561 1.4e-139 500.0 321 86.9
Medtr8g105120 Medicago truncatula HOM05D005339 ORTHO05D006561 1.4e-139 500.0 324 89.5
Eucgr.I01375 Eucalyptus grandis HOM05D005339 ORTHO05D006561 1.9e-139 499.6 322 87.3
Gohir.A03G203200 Gossypium hirsutum HOM05D005339 ORTHO05D006561 2.4e-139 499.2 321 86.9
Gorai.005G252300 Gossypium raimondii HOM05D005339 ORTHO05D006561 2.4e-139 499.2 321 86.9
Prupe.7G010600 Prunus persica HOM05D005339 ORTHO05D006561 2.4e-139 499.2 321 86.9
Potri.004G168400 Populus trichocarpa HOM05D005339 ORTHO05D006561 4.1e-139 498.4 321 87.2
CsaV3_2G015710 Cucumis sativus L. HOM05D005339 ORTHO05D006561 9.2e-139 497.3 321 87.2
Psat7g008680 Pisum sativum HOM05D005339 ORTHO05D006561 9.2e-139 497.3 325 88.0
Potri.009G129700 Populus trichocarpa HOM05D005339 ORTHO05D006561 9.2e-139 497.3 321 86.6
RcHm_v2.0_Chr2g0122771 Rosa chinensis HOM05D005339 ORTHO05D006561 9.2e-139 497.3 321 86.9
Phvul.002G320300 Phaseolus vulgaris HOM05D005339 ORTHO05D006561 1.6e-138 496.5 324 88.6
Hma1.2p1_0032F.1_g019680 Hydrangea macrophylla HOM05D005339 ORTHO05D006561 2.1e-138 496.1 321 86.3
VMungo0251G0038 Vigna mungo HOM05D005339 ORTHO05D006561 2.1e-138 496.1 324 89.2
PGR142G1539 Punica granatum HOM05D005339 ORTHO05D006561 6.0e-138 494.6 321 86.0
ClCG02G011380 Citrullus lanatus HOM05D005339 ORTHO05D006561 7.8e-138 494.2 321 86.9
Nn7g36850 Nelumbo nucifera HOM05D005339 ORTHO05D006561 7.8e-138 494.2 326 83.7
Sabra04G0112800 Salix brachista HOM05D005339 ORTHO05D006561 1.3e-137 493.4 321 85.7
CSS0049457 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 3.9e-137 491.9 322 85.7
CANSAT25G3263 Cannabis sativa HOM05D005339 ORTHO05D006561 8.6e-137 490.7 321 86.9
Ca_17265_v3 Cicer arietinum L. HOM05D005339 ORTHO05D006561 8.6e-137 490.7 325 87.4
Ca_17286_v3 Cicer arietinum L. HOM05D005339 ORTHO05D006561 8.6e-137 490.7 325 87.4
QL11p047539 Quercus lobata HOM05D005339 ORTHO05D006561 8.6e-137 490.7 321 85.7
QL11p047573 Quercus lobata HOM05D005339 ORTHO05D006561 8.6e-137 490.7 321 85.7
CiPaw.05G077200 Carya illinoinensis HOM05D005339 ORTHO05D006561 1.1e-136 490.3 321 85.0
ATR0810G182 Amborella trichopoda HOM05D005339 ORTHO05D006561 1.5e-136 490.0 321 85.4
Duzib132G0613 Durio zibethinus HOM05D005339 ORTHO05D006561 1.5e-136 490.0 333 84.7
PGSC0003DMG400001633 Solanum tuberosum HOM05D005339 ORTHO05D006561 1.5e-136 490.0 321 85.4
GSVIVG01024083001 Vitis vinifera HOM05D005339 ORTHO05D006561 1.5e-136 490.0 321 86.6
Atru.chr5.3227 Acer truncatum HOM05D005339 ORTHO05D006561 1.9e-136 489.6 321 88.2
vmacro02249 Vaccinium macrocarpon HOM05D005339 ORTHO05D006561 1.9e-136 489.6 321 86.9
Cfa005184 Carpinus fangiana HOM05D005339 ORTHO05D006561 4.3e-136 488.4 321 84.7
Aqoxy5G01796 Aquilegia oxysepala HOM05D005339 ORTHO05D006561 2.8e-135 485.7 321 85.0
Hund06405 Selenicereus undatus HOM05D005339 ORTHO05D006561 6.2e-135 484.6 321 84.4
Cc11_g02780 Coffea canephora HOM05D005339 ORTHO05D006561 8.1e-135 484.2 322 85.7
Sed0019675 Sechium edule HOM05D005339 ORTHO05D006561 1.8e-134 483.0 321 84.7
TWI31G0803 Tripterygium wilfordii HOM05D005339 ORTHO05D006561 2.3e-134 482.6 321 87.5
CAN.G588.26 Capsicum annuum HOM05D005339 ORTHO05D006561 3.1e-134 482.3 321 84.7
CiPaw.06G125300 Carya illinoinensis HOM05D005339 ORTHO05D006561 3.1e-134 482.3 321 84.7
MD14G1006100 Malus domestica HOM05D005339 ORTHO05D006561 3.1e-134 482.3 321 84.4
Sabra09G0099200 Salix brachista HOM05D005339 ORTHO05D006561 1.2e-133 480.3 350 79.7
Solyc01g111140.3 Solanum lycopersicum HOM05D005339 ORTHO05D006561 2.6e-133 479.2 321 85.0
Sopen01g053200 Solanum pennellii HOM05D005339 ORTHO05D006561 2.6e-133 479.2 321 85.0
Thhalv10000232m.g Eutrema salsugineum HOM05D005339 ORTHO05D006561 3.4e-133 478.8 322 83.5
Sp4g00300 Schrenkiella parvula HOM05D005339 ORTHO05D006561 4.4e-133 478.4 322 83.5
LjContig00310g0009118 Lotus japonicus HOM05D005339 ORTHO05D006561 5.8e-133 478.0 322 87.0
Nitab4.5_0000283g0140 Nicotiana tabacum HOM05D005339 ORTHO05D006561 5.8e-133 478.0 321 84.7
Nitab4.5_0000980g0240 Nicotiana tabacum HOM05D005339 ORTHO05D006561 5.8e-133 478.0 321 84.7
CDE04G0258 Ceratophyllum demersum HOM05D005339 ORTHO05D006561 9.9e-133 477.2 321 84.4
MD12G1008800 Malus domestica HOM05D005339 ORTHO05D006561 9.9e-133 477.2 321 83.8
Peaxi162Scf00362g01036 Petunia axillaris HOM05D005339 ORTHO05D006561 9.9e-133 477.2 321 84.1
AT2G21150 Arabidopsis thaliana HOM05D005339 ORTHO05D006561 1.7e-132 476.5 322 81.7
AL4G10240 Arabidopsis lyrata HOM05D005339 ORTHO05D006561 2.2e-132 476.1 322 81.4
CDE02G2588 Ceratophyllum demersum HOM05D005339 ORTHO05D006561 6.4e-132 474.6 321 77.6
Carub.0004s0017 Capsella rubella HOM05D005339 ORTHO05D006561 8.3e-132 474.2 322 81.1
ECA246G3996 Erigeron canadensis HOM05D005339 ORTHO05D006561 1.1e-131 473.8 321 85.0
Aa31LG7G15530 Aethionema arabicum HOM05D005339 ORTHO05D006561 2.4e-131 472.6 321 83.8
BcaB08g34965 Brassica carinata HOM05D005339 ORTHO05D006561 2.4e-131 472.6 322 83.2
Migut.B00167 Erythranthe guttata HOM05D005339 ORTHO05D006561 5.4e-131 471.5 323 83.9
FvH4_1g25110 Fragaria vesca HOM05D005339 ORTHO05D006561 7.1e-131 471.1 321 84.1
HanXRQChr15g0478851 Helianthus annuus HOM05D005339 ORTHO05D006561 9.2e-131 470.7 321 84.1
SGA_v2.0_scaffold58G20457 Striga asiatica HOM05D005339 ORTHO05D006561 1.6e-130 469.9 343 80.8
DCAR_022955 Daucus carota HOM05D005339 ORTHO05D006561 2.1e-130 469.5 339 79.6
DCAR_022956 Daucus carota HOM05D005339 ORTHO05D006561 2.1e-130 469.5 339 79.6
Dinv41975 Davidia involucrata HOM05D005339 ORTHO05D006561 6.0e-130 468.0 321 85.0
unitig_744.g24266 Utricularia gibba HOM05D005339 ORTHO05D006561 6.0e-130 468.0 336 81.8
Os09g0535300 Oryza sativa ssp. japonica HOM05D005339 ORTHO05D006561 1.7e-129 466.5 323 83.0
PSO700G0269 Papaver somniferum HOM05D005339 ORTHO05D006561 1.7e-129 466.5 323 82.7
BcaC07g41172 Brassica carinata HOM05D005339 ORTHO05D006561 2.3e-129 466.1 322 82.6
Zm00001eb103630 Zea mays HOM05D005339 ORTHO05D006561 3.9e-129 465.3 321 82.6
Oeu055639.3 Olea europaea HOM05D005339 ORTHO05D006561 5.1e-129 464.9 321 84.1
PSO170G1371 Papaver somniferum HOM05D005339 ORTHO05D006561 1.9e-128 463.0 323 82.7
A09p58500 Brassica napus HOM05D005339 ORTHO05D006561 4.3e-128 461.8 329 81.5
C04p50370 Brassica napus HOM05D005339 ORTHO05D006561 5.6e-128 461.5 322 81.7
BolC4t26635H Brassica oleracea HOM05D005339 ORTHO05D006561 5.6e-128 461.5 322 81.7
AUR62010093 Chenopodium quinoa HOM05D005339 ORTHO05D006561 1.2e-127 460.3 321 80.4
C08p41800 Brassica napus HOM05D005339 ORTHO05D006561 4.7e-127 458.4 331 80.4
MBI19_g09243_MAGBIO Magnolia biondii HOM05D005339 ORTHO05D006561 1.1e-126 457.2 349 75.9
BolC8t51743H Brassica oleracea HOM05D005339 ORTHO05D006561 6.8e-126 454.5 331 79.5
TAR376G0223 Trochodendron aralioides HOM05D005339 ORTHO05D006561 6.8e-126 454.5 334 79.6
SalBow6G1349 Salvia bowleyana HOM05D005339 ORTHO05D006561 3.4e-125 452.2 333 81.1
Mapoly0015s0022 Marchantia polymorpha HOM05D005339 ORTHO05D006561 6.4e-124 448.0 321 75.1
SMO117G0089 Selaginella moellendorffii HOM05D005339 ORTHO05D006561 3.2e-123 445.7 321 78.5
Ah.01g009160 Amaranthus hybridus HOM05D005339 ORTHO05D006561 7.1e-123 444.5 321 79.1
AagrBONN_evm.TU.Sc2ySwM_344.4430 Anthoceros agrestis HOM05D005339 ORTHO05D006561 7.1e-123 444.5 321 79.1
BraA09t41237Z Brassica rapa HOM05D005339 ORTHO05D006561 1.6e-122 443.4 351 75.8
Lj9C389T6 Lonicera japonica HOM05D005339 ORTHO05D006561 3.5e-122 442.2 361 73.1
Pp3c17_13560 Physcomitrium patens HOM05D005339 ORTHO05D006561 4.6e-122 441.8 324 75.6
FAN23G1071 Fragaria x ananassa HOM05D005339 ORTHO05D006561 1.3e-121 440.3 321 80.4
FAN28G0542 Fragaria x ananassa HOM05D005339 ORTHO05D006561 1.1e-118 430.6 350 74.6
FAN28G2786 Fragaria x ananassa HOM05D005339 ORTHO05D006561 1.1e-118 430.6 350 74.6
EL10Ac9g21438 Beta vulgaris HOM05D005339 ORTHO05D006561 1.8e-118 429.9 357 72.0
Haze_02197 Corylus avellana HOM05D005339 ORTHO05D006561 2.9e-116 422.5 321 70.4
Manes.11G090000 Manihot esculenta HOM05D005339 ORTHO05D006561 1.0e-113 414.1 274 88.0
AUR62013089 Chenopodium quinoa HOM05D005339 ORTHO05D006561 3.9e-113 412.1 321 75.4
Lsat_1_v5_gn_3_45301 Lactuca sativa HOM05D005339 ORTHO05D006561 8.7e-113 411.0 296 83.8
A04p15920 Brassica napus HOM05D005339 ORTHO05D006561 2.5e-112 409.5 322 76.7
TPR.G17076 Trifolium pratense HOM05D005339 ORTHO05D006561 2.6e-109 399.4 268 87.3
BraA04t17225Z Brassica rapa HOM05D005339 ORTHO05D006561 2.8e-103 379.4 500 52.8
Cpa.g.sc37.191 Carica papaya HOM05D005339 ORTHO05D006561 1.2e-101 374.0 321 72.9
FAN19G3054 Fragaria x ananassa HOM05D005339 ORTHO05D006561 1.3e-97 360.5 323 72.4
MELO3C020783.2 Cucumis melo HOM05D005339 ORTHO05D006561 2.3e-97 359.8 255 84.7
COL.COLO4_17257 Corchorus olitorius HOM05D005339 ORTHO05D003646 1.1e-96 357.5 322 71.1
Sc08g0003210 Simmondsia chinensis HOM05D005339 ORTHO05D006561 1.6e-95 353.6 203 84.2
Pp3c2_11550 Physcomitrium patens HOM05D005339 ORTHO05D006561 7.1e-91 338.2 277 72.2
FAN26G3137 Fragaria x ananassa HOM05D005339 ORTHO05D006561 1.4e-83 313.9 321 64.2
Cre07.g341300 Chlamydomonas reinhardtii HOM05D005339 ORTHO05D006561 3.6e-82 309.3 368 48.1
HPP92_028582 Vanilla planifolia HOM05D005339 ORTHO05D006561 1.2e-77 294.3 321 61.7
MCO15G465 Micromonas commoda HOM05D005339 ORTHO05D006561 5.9e-77 292.0 316 52.5
VMungo0251G1189 Vigna mungo HOM05D005339 ORTHO05D006561 5.3e-70 268.9 131 95.4
QL11p047601 Quercus lobata HOM05D005339 ORTHO05D006561 2.5e-67 260.0 180 72.8
SEGI_00782 Sequoiadendron giganteum HOM05D005339 ORTHO05D006561 9.1e-62 241.5 211 74.4
PRCOL_00006995 Prasinoderma coloniale HOM05D005339 ORTHO05D006561 1.2e-56 224.6 316 45.9
CBR_g47091 Chara braunii HOM05D005339 ORTHO05D006561 5.0e-52 209.1 110 87.3
CARHR112000 Cardamine hirsuta HOM05D005339 ORTHO05D006561 2.5e-43 180.3 165 66.7
CSS0027179 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 3.7e-39 166.4 91 89.0
VMungo0251G1261 Vigna mungo HOM05D005339 ORTHO05D006561 6.6e-36 155.6 88 93.2
Actinidia00595 Actinidia chinensis HOM05D005339 ORTHO05D006561 4.3e-35 152.9 88 90.9
CSS0019608 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 9.8e-32 141.7 66 97.0
Phvul.002G320400 Phaseolus vulgaris HOM05D005339 ORTHO05D006561 1.4e-25 121.3 320 32.2
TPR.G35331 Trifolium pratense HOM05D005339 ORTHO05D006561 1.1e-22 111.7 55 94.5
MCO03G074 Micromonas commoda HOM05D005339 ORTHO05D006561 3.4e-16 90.1 196 30.1
Cfa025584 Carpinus fangiana HOM05D005339 ORTHO05D006561 2.4e-14 84.0 230 27.8
RcHm_v2.0_Chr5g0045021 Rosa chinensis HOM05D005339 ORTHO05D006561 2.3e-12 77.4 39 89.7
TPR.G17724 Trifolium pratense HOM05D005339 ORTHO05D006561 3.3e-11 73.6 41 87.8
Actinidia00596 Actinidia chinensis HOM05D003396 ORTHO05D003646 1.4e-09 68.2 45 73.3
CSS0035622 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 1.4e-09 68.2 78 76.9
SMO301G0014 Selaginella moellendorffii HOM05D005339 ORTHO05D006561 4.9e-07 59.7 48 60.4


User provided reference genes

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