Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr22g0357681 Lupinus albus HOM05D004558 ORTHO05D005647 1.8e-48 195.7 101 100.0
Lalb_Chr14g0365301 Lupinus albus HOM05D004558 ORTHO05D005647 1.4e-42 176.0 100 90.0
Lalb_Chr24g0400681 Lupinus albus HOM05D004558 ORTHO05D005647 9.6e-39 163.3 100 82.0
Lj1g0019045 Lotus japonicus HOM05D004558 ORTHO05D005647 6.9e-37 157.1 99 83.8
Phvul.001G108700 Phaseolus vulgaris HOM05D004558 ORTHO05D005647 1.5e-36 156.0 103 80.6
Manes.09G073800 Manihot esculenta HOM05D004558 ORTHO05D005647 1.7e-35 152.5 102 79.4
TWI53G2040 Tripterygium wilfordii HOM05D004558 ORTHO05D005647 8.4e-35 150.2 98 78.6
MELO3C026802.2 Cucumis melo HOM05D004558 ORTHO05D005647 1.9e-34 149.1 99 77.8
Thecc.05G130200 Theobroma cacao HOM05D004558 ORTHO05D005647 3.2e-34 148.3 97 79.4
CsaV3_4G031720 Cucumis sativus L. HOM05D004558 ORTHO05D005647 4.2e-34 147.9 99 76.8
Potri.016G025000 Populus trichocarpa HOM05D004558 ORTHO05D005647 4.2e-34 147.9 100 78.0
ClCG04G004930 Citrullus lanatus HOM05D004558 ORTHO05D005647 5.5e-34 147.5 99 76.8
Potri.006G027300 Populus trichocarpa HOM05D004558 ORTHO05D005647 5.5e-34 147.5 100 79.0
arahy.Tifrunner.gnm1.ann1.VDKY5W Arachis hypogaea HOM05D004558 ORTHO05D005647 7.2e-34 147.1 103 78.6
Sabra06G0020200 Salix brachista HOM05D004558 ORTHO05D005647 7.2e-34 147.1 100 77.0
CiPaw.09G162600 Carya illinoinensis HOM05D004558 ORTHO05D005647 1.6e-33 146.0 100 78.0
Sabra16G0030900 Salix brachista HOM05D004558 ORTHO05D005647 2.1e-33 145.6 100 76.0
TPR.G23197 Trifolium pratense HOM05D004558 ORTHO05D005647 3.5e-33 144.8 94 80.9
TWI77G0093 Tripterygium wilfordii HOM05D004558 ORTHO05D005647 1.3e-32 142.9 98 74.5
Ciclev10011842m.g Citrus clementina HOM05D004558 ORTHO05D005647 2.3e-32 142.1 100 75.0
Nitab4.5_0000123g0170 Nicotiana tabacum HOM05D004558 ORTHO05D005647 2.3e-32 142.1 92 78.3
Nitab4.5_0001270g0120 Nicotiana tabacum HOM05D004558 ORTHO05D005647 2.3e-32 142.1 92 78.3
Cfa019915 Carpinus fangiana HOM05D004558 ORTHO05D005647 3.0e-32 141.7 99 75.8
Haze_20335 Corylus avellana HOM05D004558 ORTHO05D005647 3.0e-32 141.7 99 75.8
Gohir.A01G192400 Gossypium hirsutum HOM05D004558 ORTHO05D005647 3.9e-32 141.4 100 74.0
Cpa.g.sc92.57 Carica papaya HOM05D004558 ORTHO05D005647 5.1e-32 141.0 102 74.5
arahy.Tifrunner.gnm1.ann1.XE2WF0 Arachis hypogaea HOM05D004558 ORTHO05D005647 1.1e-31 139.8 105 74.3
GSVIVG01025841001 Vitis vinifera HOM05D004558 ORTHO05D005647 2.5e-31 138.7 83 84.3
Duzib093G1273 Durio zibethinus HOM05D004558 ORTHO05D005647 3.3e-31 138.3 100 75.0
Sc19g0007850 Simmondsia chinensis HOM05D004558 ORTHO05D005647 3.3e-31 138.3 95 75.8
AUR62018443 Chenopodium quinoa HOM05D004558 ORTHO05D005647 5.7e-31 137.5 92 76.1
Glyma.03G119500 Glycine max HOM05D004558 ORTHO05D005647 9.7e-31 136.7 100 78.0
MBI13_g30268_MAGBIO Magnolia biondii HOM05D004558 ORTHO05D005647 9.7e-31 136.7 91 78.0
Hund24509 Selenicereus undatus HOM05D004558 ORTHO05D005647 1.3e-30 136.3 84 82.1
TAR369G0680 Trochodendron aralioides HOM05D004558 ORTHO05D005647 1.3e-30 136.3 97 78.4
QL07p015188 Quercus lobata HOM05D004558 ORTHO05D005647 1.6e-30 136.0 102 73.5
VMungo1383G3341 Vigna mungo HOM05D004558 ORTHO05D005647 1.6e-30 136.0 100 74.0
AUR62020990 Chenopodium quinoa HOM05D004558 ORTHO05D005647 2.8e-30 135.2 92 75.0
Peaxi162Scf00003g05355 Petunia axillaris HOM05D004558 ORTHO05D005647 2.8e-30 135.2 91 75.8
Eucgr.A02177 Eucalyptus grandis HOM05D004558 ORTHO05D005647 4.8e-30 134.4 99 71.7
Glyma.19G123800 Glycine max HOM05D004558 ORTHO05D005647 4.8e-30 134.4 106 72.6
Duzib128G1152 Durio zibethinus HOM05D004558 ORTHO05D005647 6.3e-30 134.0 95 72.6
Medtr7g088340 Medicago truncatula HOM05D004558 ORTHO05D005647 1.1e-29 133.3 71 93.0
Prupe.7G022500 Prunus persica HOM05D004558 ORTHO05D005647 2.4e-29 132.1 99 74.7
Ah.04g150190 Amaranthus hybridus HOM05D004558 ORTHO05D005647 3.1e-29 131.7 96 70.8
DCAR_013513 Daucus carota HOM05D004558 ORTHO05D005647 4.1e-29 131.3 98 67.3
Aqoxy2G00035_Aqoxy2G00036 Aquilegia oxysepala HOM05D004558 ORTHO05D005647 6.9e-29 130.6 95 73.7
Psat3g082520 Pisum sativum HOM05D004558 ORTHO05D005647 6.9e-29 130.6 71 90.1
TAR546G0001 Trochodendron aralioides HOM05D004558 ORTHO05D005647 6.9e-29 130.6 93 75.3
Atru.chr1.1539 Acer truncatum HOM05D004558 ORTHO05D005647 1.2e-28 129.8 75 84.0
Cc06_g22740 Coffea canephora HOM05D004558 ORTHO05D005647 1.2e-28 129.8 87 77.0
CDE04G3757 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 2.0e-28 129.0 93 74.2
Ca_08344_v3 Cicer arietinum L. HOM05D004558 ORTHO05D005647 2.0e-28 129.0 71 90.1
PGR042G2423 Punica granatum HOM05D004558 ORTHO05D005647 2.0e-28 129.0 97 68.0
CDE02G2354 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 2.6e-28 128.6 93 74.2
PSO384G3158 Papaver somniferum HOM05D004558 ORTHO05D005647 2.6e-28 128.6 94 72.3
ATR1096G103 Amborella trichopoda HOM05D004558 ORTHO05D005647 3.4e-28 128.3 99 71.7
PSO339G0825 Papaver somniferum HOM05D004558 ORTHO05D005647 3.4e-28 128.3 94 73.4
THA.LOC104803235 Tarenaya hassleriana HOM05D004558 ORTHO05D005647 3.4e-28 128.3 95 72.6
Oeu023011.1 Olea europaea HOM05D004558 ORTHO05D005647 1.3e-27 126.3 89 74.2
THA.LOC104824384 Tarenaya hassleriana HOM05D004558 ORTHO05D005647 1.3e-27 126.3 96 70.8
FvH4_1g28960 Fragaria vesca HOM05D004558 ORTHO05D005647 1.7e-27 125.9 98 71.4
FAN19G1019 Fragaria x ananassa HOM05D004558 ORTHO05D005647 1.7e-27 125.9 98 71.4
FAN23G1063 Fragaria x ananassa HOM05D004558 ORTHO05D005647 1.7e-27 125.9 98 71.4
FAN26G0634 Fragaria x ananassa HOM05D004558 ORTHO05D005647 1.7e-27 125.9 98 71.4
FAN28G2842 Fragaria x ananassa HOM05D004558 ORTHO05D005647 1.7e-27 125.9 98 71.4
Sed0025713 Sechium edule HOM05D004558 ORTHO05D005647 1.7e-27 125.9 99 67.7
Gohir.D01G177500 Gossypium hirsutum HOM05D004558 ORTHO05D005647 2.9e-27 125.2 100 67.0
Gorai.002G225700 Gossypium raimondii HOM05D004558 ORTHO05D005647 2.9e-27 125.2 100 67.0
CAN.G959.37 Capsicum annuum HOM05D004558 ORTHO05D005647 3.8e-27 124.8 92 70.7
Hma1.2p1_0251F.1_g102500 Hydrangea macrophylla HOM05D004558 ORTHO05D005647 3.8e-27 124.8 93 68.8
Oeu060750.2 Olea europaea HOM05D004558 ORTHO05D005647 3.8e-27 124.8 99 67.7
Actinidia00883 Actinidia chinensis HOM05D004558 ORTHO05D005647 5.0e-27 124.4 76 81.6
EL10Ac3g07349 Beta vulgaris HOM05D004558 ORTHO05D005647 6.5e-27 124.0 76 81.6
Solyc10g077040.2 Solanum lycopersicum HOM05D004558 ORTHO05D005647 8.5e-27 123.6 93 71.0
Sopen10g028720 Solanum pennellii HOM05D004558 ORTHO05D005647 8.5e-27 123.6 93 71.0
PGSC0003DMG400007188 Solanum tuberosum HOM05D004558 ORTHO05D005647 8.5e-27 123.6 93 71.0
BcaC07g40007 Brassica carinata HOM05D004558 ORTHO05D005647 1.1e-26 123.2 100 68.0
ECA247G1747 Erigeron canadensis HOM05D004558 ORTHO05D005647 1.1e-26 123.2 96 67.7
RcHm_v2.0_Chr3g0494361 Rosa chinensis HOM05D004558 ORTHO05D005647 1.1e-26 123.2 99 66.7
Actinidia38207 Actinidia chinensis HOM05D004558 ORTHO05D005647 1.4e-26 122.9 76 80.3
CANSAT78G1575 Cannabis sativa HOM05D004558 ORTHO05D005647 1.4e-26 122.9 99 64.6
DCAR_016944 Daucus carota HOM05D004558 ORTHO05D005647 1.4e-26 122.9 97 67.0
CSS0026074 Camellia sinensis var. sinensis HOM05D004558 ORTHO05D005647 1.9e-26 122.5 77 79.2
CSS0045826 Camellia sinensis var. sinensis HOM05D004558 ORTHO05D005647 1.9e-26 122.5 77 79.2
SGA_v2.0_scaffold69G23196 Striga asiatica HOM05D004558 ORTHO05D005647 1.9e-26 122.5 91 65.9
HPP92_000650 Vanilla planifolia HOM05D004558 ORTHO05D005647 1.9e-26 122.5 88 70.5
HPP92_000696 Vanilla planifolia HOM05D004558 ORTHO05D005647 1.9e-26 122.5 88 70.5
SGA_v2.0_scaffold66G22316 Striga asiatica HOM05D004558 ORTHO05D005647 3.2e-26 121.7 91 70.3
BcaC08g44811 Brassica carinata HOM05D004558 ORTHO05D005647 4.2e-26 121.3 103 66.0
A07p23140 Brassica napus HOM05D004558 ORTHO05D005647 4.2e-26 121.3 103 65.0
C06p23840 Brassica napus HOM05D004558 ORTHO05D005647 4.2e-26 121.3 103 65.0
BolC6t37555H Brassica oleracea HOM05D004558 ORTHO05D005647 4.2e-26 121.3 103 65.0
BraA07t29976Z Brassica rapa HOM05D004558 ORTHO05D005647 4.2e-26 121.3 103 65.0
HanXRQChr10g0291961 Helianthus annuus HOM05D004558 ORTHO05D005647 4.2e-26 121.3 98 67.3
AL5G38370 Arabidopsis lyrata HOM05D004558 ORTHO05D005647 5.5e-26 120.9 76 78.9
CARHR167090 Cardamine hirsuta HOM05D004558 ORTHO05D005647 5.5e-26 120.9 100 66.0
Migut.K00174 Erythranthe guttata HOM05D004558 ORTHO05D005647 7.2e-26 120.6 98 65.3
Aa31LG10G11840 Aethionema arabicum HOM05D004558 ORTHO05D005647 9.4e-26 120.2 102 67.6
CDE02G0342 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 9.4e-26 120.2 88 72.7
Lsat_1_v5_gn_9_30221 Lactuca sativa HOM05D004558 ORTHO05D005647 1.2e-25 119.8 73 79.5
BcaB02g07634 Brassica carinata HOM05D004558 ORTHO05D005647 1.6e-25 119.4 107 66.4
Thhalv10006009m.g Eutrema salsugineum HOM05D004558 ORTHO05D005647 1.6e-25 119.4 100 65.0
unitig_37.g12773 Utricularia gibba HOM05D004558 ORTHO05D005647 1.6e-25 119.4 77 77.9
Os01g0279100 Oryza sativa ssp. japonica HOM05D004558 ORTHO05D005647 2.1e-25 119.0 95 65.3
unitig_46.g18485 Utricularia gibba HOM05D004558 ORTHO05D005647 2.1e-25 119.0 77 77.9
Dinv11638 Davidia involucrata HOM05D004558 ORTHO05D005647 2.7e-25 118.6 94 68.1
BcaC07g40105 Brassica carinata HOM05D004558 ORTHO05D005647 3.6e-25 118.2 100 67.0
A09p49810 Brassica napus HOM05D004558 ORTHO05D005647 3.6e-25 118.2 100 67.0
BraA09t40434Z Brassica rapa HOM05D004558 ORTHO05D005647 3.6e-25 118.2 100 67.0
Carub.0005s2368 Capsella rubella HOM05D004558 ORTHO05D005647 3.6e-25 118.2 100 65.0
Sp5g05650 Schrenkiella parvula HOM05D004558 ORTHO05D005647 3.6e-25 118.2 104 64.4
Rhsim04G0119000 Rhododendron simsii HOM05D004558 ORTHO05D005647 6.1e-25 117.5 69 84.1
Rhsim04G0119100 Rhododendron simsii HOM05D004558 ORTHO05D005647 6.1e-25 117.5 69 84.1
Zm00001eb332650 Zea mays HOM05D004558 ORTHO05D005647 6.1e-25 117.5 98 64.3
Zm00001eb129000 Zea mays HOM05D004558 ORTHO05D005647 7.9e-25 117.1 90 67.8
MSTRG.6287 Avicennia marina HOM05D004558 ORTHO05D005647 3.0e-24 115.2 98 66.3
vmacro08967 Vaccinium macrocarpon HOM05D004558 ORTHO05D005647 3.0e-24 115.2 69 82.6
Pp3c11_7910 Physcomitrium patens HOM05D004558 ORTHO05D005647 3.9e-24 114.8 81 69.1
Pp3c7_26570 Physcomitrium patens HOM05D004558 ORTHO05D005647 6.7e-24 114.0 75 76.0
SMO115G0161 Selaginella moellendorffii HOM05D004558 ORTHO05D005647 6.7e-24 114.0 86 68.6
SMO119G0375 Selaginella moellendorffii HOM05D004558 ORTHO05D005647 2.0e-23 112.5 86 68.6
Mapoly0124s0017 Marchantia polymorpha HOM05D004558 ORTHO05D005647 7.4e-23 110.5 72 75.0
SEGI_29193 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 1.7e-22 109.4 98 62.2
AagrBONN_evm.TU.Sc2ySwM_228.50 Anthoceros agrestis HOM05D004558 ORTHO05D005647 2.8e-22 108.6 79 69.6
Lj1A1078T64 Lonicera japonica HOM05D004558 ORTHO05D005647 4.8e-22 107.8 101 59.4
Oeu021019.1 Olea europaea HOM05D004558 ORTHO05D005647 4.8e-22 107.8 97 63.9
Cre12.g510050 Chlamydomonas reinhardtii HOM05D004558 ORTHO05D005647 9.1e-21 103.6 72 68.1
Pp3c2_30650 Physcomitrium patens HOM05D004558 ORTHO05D005647 1.0e-19 100.1 77 66.2
CBR_g50688 Chara braunii HOM05D004558 ORTHO05D005647 1.7e-19 99.4 86 62.8
PRCOL_00006479 Prasinoderma coloniale HOM05D004558 ORTHO05D005647 3.8e-19 98.2 76 64.5
AT3G56940 Arabidopsis thaliana HOM05D004558 ORTHO05D005647 2.7e-17 92.0 52 86.5
MCO13G411 Micromonas commoda HOM05D004558 ORTHO05D005647 1.4e-16 89.7 72 62.5
CBR_g55376 Chara braunii HOM05D004558 ORTHO05D005647 3.0e-16 88.6 72 63.9
Cre07.g346050 Chlamydomonas reinhardtii HOM05D004558 ORTHO05D005647 3.0e-16 88.6 97 50.5
Lalb_Chr22g0358071 Lupinus albus HOM05D004558 ORTHO05D239964 2.2e-11 72.4 49 83.7
MSTRG.26191 Avicennia marina HOM05D004558 ORTHO05D087779 2.8e-06 55.5 53 56.6


User provided reference genes

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