Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0381651 Lupinus albus HOM05D004350 ORTHO05D005260 4.6e-77 291.2 150 100.0
Lalb_Chr05g0216341 Lupinus albus HOM05D004350 ORTHO05D005260 2.9e-39 165.6 86 91.9
Aqoxy5G01391 Aquilegia oxysepala HOM05D004350 ORTHO05D005260 8.4e-39 164.1 86 89.5
Nn1g05564 Nelumbo nucifera HOM05D004350 ORTHO05D005260 8.4e-39 164.1 86 89.5
Lj4g0019109 Lotus japonicus HOM05D004350 ORTHO05D005260 5.4e-38 161.4 86 90.7
Phvul.003G289100 Phaseolus vulgaris HOM05D004350 ORTHO05D005260 9.3e-38 160.6 86 89.5
vmacro18559 Vaccinium macrocarpon HOM05D004350 ORTHO05D005260 1.2e-37 160.2 86 87.2
PGR031G0248 Punica granatum HOM05D004350 ORTHO05D005260 2.1e-37 159.5 86 87.2
CSS0009628 Camellia sinensis var. sinensis HOM05D004350 ORTHO05D005260 2.7e-37 159.1 86 84.9
Eucgr.K02898 Eucalyptus grandis HOM05D004350 ORTHO05D005260 4.6e-37 158.3 86 86.0
Glyma.18G146900 Glycine max HOM05D004350 ORTHO05D005260 7.9e-37 157.5 86 87.2
Nn5g29888 Nelumbo nucifera HOM05D004350 ORTHO05D005260 1.0e-36 157.1 86 87.2
Sc03g0000310 Simmondsia chinensis HOM05D004350 ORTHO05D005260 1.0e-36 157.1 86 84.9
CiPaw.08G140000 Carya illinoinensis HOM05D004350 ORTHO05D005260 1.8e-36 156.4 86 86.0
Gohir.A11G206700 Gossypium hirsutum HOM05D004350 ORTHO05D005260 2.3e-36 156.0 130 65.4
Manes.13G099500 Manihot esculenta HOM05D004350 ORTHO05D005260 2.3e-36 156.0 86 84.9
VMungo0251G2520 Vigna mungo HOM05D004350 ORTHO05D005260 2.3e-36 156.0 86 86.0
Glyma.08G279700 Glycine max HOM05D004350 ORTHO05D005260 3.9e-36 155.2 86 87.2
Phvul.002G147400 Phaseolus vulgaris HOM05D004350 ORTHO05D005260 3.9e-36 155.2 86 87.2
Hma1.2p1_0433F.1_g152050 Hydrangea macrophylla HOM05D004350 ORTHO05D005260 5.1e-36 154.8 86 86.0
Rhsim08G0016400 Rhododendron simsii HOM05D004350 ORTHO05D005260 5.1e-36 154.8 86 82.6
Ca_22608_v3 Cicer arietinum L. HOM05D004350 ORTHO05D005260 6.7e-36 154.5 86 84.9
CiPaw.07G047800 Carya illinoinensis HOM05D004350 ORTHO05D005260 8.7e-36 154.1 86 82.6
Nitab4.5_0000902g0360 Nicotiana tabacum HOM05D004350 ORTHO05D005260 1.5e-35 153.3 86 82.6
Sopen04g006490 Solanum pennellii HOM05D004350 ORTHO05D005260 1.5e-35 153.3 86 82.6
Duzib264G0362 Durio zibethinus HOM05D004350 ORTHO05D005260 1.9e-35 152.9 130 64.6
MD01G1038800 Malus domestica HOM05D004350 ORTHO05D005260 1.9e-35 152.9 86 84.9
Psat4g119600 Pisum sativum HOM05D004350 ORTHO05D005260 1.9e-35 152.9 86 84.9
Duzib187G1704 Durio zibethinus HOM05D004350 ORTHO05D005260 3.3e-35 152.1 130 63.8
PSO017G6956 Papaver somniferum HOM05D004350 ORTHO05D005260 3.3e-35 152.1 86 83.7
PSO170G2632 Papaver somniferum HOM05D004350 ORTHO05D005260 3.3e-35 152.1 86 83.7
PSO170G6309 Papaver somniferum HOM05D004350 ORTHO05D005260 3.3e-35 152.1 86 83.7
Zm00001eb124340 Zea mays HOM05D004350 ORTHO05D005260 3.3e-35 152.1 83 81.9
Actinidia30847 Actinidia chinensis HOM05D004350 ORTHO05D005260 4.3e-35 151.8 86 83.7
Medtr8g471160 Medicago truncatula HOM05D004350 ORTHO05D005260 7.4e-35 151.0 83 85.5
Prupe.6G201300 Prunus persica HOM05D004350 ORTHO05D005260 7.4e-35 151.0 83 83.1
Solyc04g014370.4 Solanum lycopersicum HOM05D004350 ORTHO05D005260 9.6e-35 150.6 86 81.4
Potri.007G010900 Populus trichocarpa HOM05D004350 ORTHO05D005260 1.3e-34 150.2 130 64.6
CDE06G0701 Ceratophyllum demersum HOM05D004350 ORTHO05D005260 2.1e-34 149.4 86 82.6
THA.LOC104819292 Tarenaya hassleriana HOM05D004350 ORTHO05D005260 2.1e-34 149.4 86 82.6
TPR.G14596 Trifolium pratense HOM05D004350 ORTHO05D005260 2.1e-34 149.4 83 83.1
Actinidia28826 Actinidia chinensis HOM05D004350 ORTHO05D005260 2.8e-34 149.1 130 64.6
Gohir.D11G216900 Gossypium hirsutum HOM05D004350 ORTHO05D005260 2.8e-34 149.1 130 63.8
PSO170G2166 Papaver somniferum HOM05D004350 ORTHO05D005260 3.7e-34 148.7 86 82.6
PGSC0003DMG400023576 Solanum tuberosum HOM05D004350 ORTHO05D005260 3.7e-34 148.7 86 80.2
THA.LOC104798725 Tarenaya hassleriana HOM05D004350 ORTHO05D005260 3.7e-34 148.7 86 81.4
Ah.02g123600 Amaranthus hybridus HOM05D004350 ORTHO05D005260 4.8e-34 148.3 86 77.9
AUR62003659 Chenopodium quinoa HOM05D004350 ORTHO05D005260 6.2e-34 147.9 86 76.7
Os04g0271200 Oryza sativa ssp. japonica HOM05D004350 ORTHO05D005260 6.2e-34 147.9 83 78.3
GSVIVG01005931001 Vitis vinifera HOM05D004350 ORTHO05D005260 6.2e-34 147.9 130 61.5
HPP92_014310 Vanilla planifolia HOM05D004350 ORTHO05D005260 1.1e-33 147.1 84 79.8
CAN.G525.29 Capsicum annuum HOM05D004350 ORTHO05D005260 1.4e-33 146.7 86 79.1
PSO170G6456 Papaver somniferum HOM05D004350 ORTHO05D005260 1.8e-33 146.4 86 80.2
Carub.0006s0896 Capsella rubella HOM05D004350 ORTHO05D005260 2.4e-33 146.0 86 82.6
Hund16535 Selenicereus undatus HOM05D004350 ORTHO05D005260 4.0e-33 145.2 119 64.7
MD15G1313000 Malus domestica HOM05D004350 ORTHO05D005260 5.3e-33 144.8 86 80.2
RcHm_v2.0_Chr2g0111251 Rosa chinensis HOM05D004350 ORTHO05D005260 5.3e-33 144.8 119 65.5
PSO541G1644 Papaver somniferum HOM05D004350 ORTHO05D005260 6.9e-33 144.4 86 77.9
Thecc.01G091200 Theobroma cacao HOM05D004350 ORTHO05D005260 6.9e-33 144.4 130 60.8
SEGI_08262 Sequoiadendron giganteum HOM05D004350 ORTHO05D005260 1.2e-32 143.7 84 76.2
CARHR202810 Cardamine hirsuta HOM05D004350 ORTHO05D005260 1.5e-32 143.3 86 80.2
Os01g0150200 Oryza sativa ssp. japonica HOM05D004350 ORTHO05D005260 1.5e-32 143.3 83 74.7
Sed0019313 Sechium edule HOM05D004350 ORTHO05D005260 1.5e-32 143.3 86 79.1
CANSAT01G3290 Cannabis sativa HOM05D004350 ORTHO05D005260 2.6e-32 142.5 130 60.8
CDE04G1055 Ceratophyllum demersum HOM05D004350 ORTHO05D005260 2.6e-32 142.5 83 80.7
TWI53G1737 Tripterygium wilfordii HOM05D004350 ORTHO05D005260 2.6e-32 142.5 86 79.1
AL6G21000 Arabidopsis lyrata HOM05D004350 ORTHO05D005260 4.5e-32 141.7 86 79.1
MELO3C016419.2 Cucumis melo HOM05D004350 ORTHO05D005260 4.5e-32 141.7 86 79.1
Sp6g32950 Schrenkiella parvula HOM05D004350 ORTHO05D005260 4.5e-32 141.7 86 79.1
ClCG10G007720 Citrullus lanatus HOM05D004350 ORTHO05D005260 5.8e-32 141.4 86 77.9
CsaV3_3G006860 Cucumis sativus L. HOM05D004350 ORTHO05D005260 5.8e-32 141.4 86 77.9
AT5G10480 Arabidopsis thaliana HOM05D004350 ORTHO05D005260 7.6e-32 141.0 86 79.1
BolC3t13038H Brassica oleracea HOM05D004350 ORTHO05D005260 7.6e-32 141.0 86 77.9
HanXRQChr14g0442921 Helianthus annuus HOM05D004350 ORTHO05D005260 7.6e-32 141.0 86 75.6
Oeu003728.1 Olea europaea HOM05D004350 ORTHO05D005260 7.6e-32 141.0 86 75.6
BraA03t09799Z Brassica rapa HOM05D004350 ORTHO05D005260 9.9e-32 140.6 86 77.9
EL10Ac6g15209 Beta vulgaris HOM05D004350 ORTHO05D005260 1.7e-31 139.8 119 58.8
FAN19G0871 Fragaria x ananassa HOM05D004350 ORTHO05D005260 2.2e-31 139.4 86 73.3
TWI74G1117 Tripterygium wilfordii HOM05D004350 ORTHO05D005260 2.2e-31 139.4 86 75.6
ATR0767G219 Amborella trichopoda HOM05D004350 ORTHO05D005260 2.9e-31 139.0 118 61.0
FAN28G1749 Fragaria x ananassa HOM05D004350 ORTHO05D005260 3.8e-31 138.7 86 73.3
Ca_22603_v3 Cicer arietinum L. HOM05D004350 ORTHO05D005260 4.9e-31 138.3 85 70.6
ECA238G4457 Erigeron canadensis HOM05D004350 ORTHO05D005260 4.9e-31 138.3 84 75.0
Lsat_1_v5_gn_2_70580 Lactuca sativa HOM05D004350 ORTHO05D005260 8.4e-31 137.5 84 73.8
Peaxi162Scf00196g00225 Petunia axillaris HOM05D004350 ORTHO05D005260 8.4e-31 137.5 86 77.9
FAN26G2403 Fragaria x ananassa HOM05D004350 ORTHO05D005260 1.1e-30 137.1 86 72.1
Nitab4.5_0009469g0010 Nicotiana tabacum HOM05D004350 ORTHO05D005260 1.1e-30 137.1 86 77.9
Thhalv10014620m.g Eutrema salsugineum HOM05D004350 ORTHO05D005260 1.9e-30 136.3 130 61.5
Oeu055598.1 Olea europaea HOM05D004350 ORTHO05D005260 1.9e-30 136.3 86 73.3
C03p05130 Brassica napus HOM05D004350 ORTHO05D005260 2.4e-30 136.0 130 60.0
Dinv13605 Davidia involucrata HOM05D004350 ORTHO05D005260 2.4e-30 136.0 122 61.5
FAN23G0465 Fragaria x ananassa HOM05D004350 ORTHO05D005260 2.4e-30 136.0 86 70.9
Nitab4.5_0004153g0110 Nicotiana tabacum HOM05D004350 ORTHO05D005260 2.4e-30 136.0 104 63.5
BcaB01g05531 Brassica carinata HOM05D004350 ORTHO05D005260 4.2e-30 135.2 130 60.0
BcaB01g06282 Brassica carinata HOM05D004350 ORTHO05D005260 4.2e-30 135.2 130 60.0
BcaB08g37102 Brassica carinata HOM05D004350 ORTHO05D005260 4.2e-30 135.2 130 60.0
A03p04570 Brassica napus HOM05D004350 ORTHO05D005260 4.2e-30 135.2 130 60.0
SGA_v2.0_scaffold58G20514 Striga asiatica HOM05D004350 ORTHO05D005260 5.5e-30 134.8 86 72.1
AUR62043746 Chenopodium quinoa HOM05D004350 ORTHO05D005260 9.3e-30 134.0 79 74.7
FvH4_1g19690 Fragaria vesca HOM05D004350 ORTHO05D005260 1.2e-29 133.7 130 56.2
Cc07_g14130 Coffea canephora HOM05D004350 ORTHO05D005260 1.6e-29 133.3 86 76.7
ECA246G1176 Erigeron canadensis HOM05D004350 ORTHO05D005260 3.5e-29 132.1 114 62.3
Sopen11g005390 Solanum pennellii HOM05D004350 ORTHO05D005260 1.0e-28 130.6 84 70.2
SGA_v2.0_scaffold32G13177 Striga asiatica HOM05D004350 ORTHO05D005260 1.3e-28 130.2 83 66.3
Migut.B00221 Erythranthe guttata HOM05D004350 ORTHO05D005260 1.8e-28 129.8 86 69.8
BolC9t59459H Brassica oleracea HOM05D004350 ORTHO05D005260 2.3e-28 129.4 101 65.3
HanXRQChr11g0346981 Helianthus annuus HOM05D004350 ORTHO05D005260 3.0e-28 129.0 86 67.4
Lsat_1_v5_gn_3_62861 Lactuca sativa HOM05D004350 ORTHO05D005260 3.9e-28 128.6 80 73.8
Mapoly0034s0103 Marchantia polymorpha HOM05D004350 ORTHO05D005260 1.9e-27 126.3 86 65.1
C09p66790 Brassica napus HOM05D004350 ORTHO05D005260 3.3e-27 125.6 145 51.7
BraA10t44761Z Brassica rapa HOM05D004350 ORTHO05D005260 9.6e-27 124.0 126 56.3
SalBow6G1994 Salvia bowleyana HOM05D004350 ORTHO05D005260 9.6e-27 124.0 84 69.0
TAR625G1314 Trochodendron aralioides HOM05D004350 ORTHO05D005260 1.3e-26 123.6 63 87.3
Haze_03867 Corylus avellana HOM05D004350 ORTHO05D005260 2.1e-26 122.9 64 85.9
MBI16_g27585_MAGBIO Magnolia biondii HOM05D004350 ORTHO05D005260 3.7e-26 122.1 63 85.7
VMungo1215G0627 Vigna mungo HOM05D004350 ORTHO05D005260 8.2e-26 120.9 63 87.3
arahy.Tifrunner.gnm1.ann1.4PU0PP Arachis hypogaea HOM05D004350 ORTHO05D005260 2.4e-25 119.4 60 91.7
arahy.Tifrunner.gnm1.ann1.Y3UPDN Arachis hypogaea HOM05D004350 ORTHO05D005260 2.4e-25 119.4 60 91.7
Os01g0150800 Oryza sativa ssp. japonica HOM05D004350 ORTHO05D005260 2.4e-25 119.4 83 59.0
Atru.chr3.1251 Acer truncatum HOM05D004350 ORTHO05D005260 2.0e-24 116.3 72 70.8
TAR381G0377 Trochodendron aralioides HOM05D004350 ORTHO05D005260 2.0e-24 116.3 63 84.1
Gorai.007G233000 Gossypium raimondii HOM05D004350 ORTHO05D005260 2.6e-24 115.9 106 61.3
QL06p035732 Quercus lobata HOM05D004350 ORTHO05D005260 4.5e-24 115.2 60 86.7
Cfa006886 Carpinus fangiana HOM05D004350 ORTHO05D005260 7.6e-24 114.4 100 63.0
Pp3c2_13410 Physcomitrium patens HOM05D004350 ORTHO05D005260 3.8e-23 112.1 79 63.3
Nitab4.5_0001468g0120 Nicotiana tabacum HOM05D004350 ORTHO05D005260 3.2e-22 109.0 63 76.2
Lju188A2T35 Lonicera japonica HOM05D004350 ORTHO05D005260 2.1e-21 106.3 63 74.6
DCAR_014186 Daucus carota HOM05D004350 ORTHO05D005260 4.6e-21 105.1 59 79.7
Aa31LG3G16680 Aethionema arabicum HOM05D004350 ORTHO05D005260 8.7e-20 100.9 117 51.3
AUR62017968 Chenopodium quinoa HOM05D004350 ORTHO05D005260 1.9e-19 99.8 55 76.4
AagrBONN_evm.TU.Sc2ySwM_228.1037 Anthoceros agrestis HOM05D004350 ORTHO05D005260 2.5e-19 99.4 65 67.7
COL.COLO4_27351 Corchorus olitorius HOM05D004350 ORTHO05D005260 7.4e-19 97.8 66 68.2
A10p27090 Brassica napus HOM05D004350 ORTHO05D005260 9.7e-19 97.4 108 50.9
Os01g0150500 Oryza sativa ssp. japonica HOM05D004350 ORTHO05D005260 6.3e-18 94.7 62 62.9
Aa31LG5G22920 Aethionema arabicum HOM05D004350 ORTHO05D005260 1.8e-17 93.2 98 53.1
PRCOL_00006117 Prasinoderma coloniale HOM05D004350 ORTHO05D005260 1.2e-16 90.5 123 43.1
Solyc11g010590.3 Solanum lycopersicum HOM05D004350 ORTHO05D005260 1.9e-14 83.2 56 64.3
Cre03.g167924 Chlamydomonas reinhardtii HOM05D004350 ORTHO05D005260 2.1e-13 79.7 80 47.5
SMO266G0038 Selaginella moellendorffii HOM05D004350 ORTHO05D005260 1.8e-12 76.6 107 41.1
CAN.G1344.6 Capsicum annuum HOM05D004350 ORTHO05D005260 3.3e-11 72.4 108 40.7
MCO05G519 Micromonas commoda HOM05D004350 ORTHO05D008939 7.4e-11 71.2 111 37.8
MCO16G529 Micromonas commoda HOM05D004350 ORTHO05D005260 3.7e-10 68.9 94 37.2
Zm00001eb335910 Zea mays HOM05D004350 ORTHO05D005260 1.8e-09 66.6 121 35.5
Cpa.g.sc55.29 Carica papaya HOM05D004350 ORTHO05D005260 1.0e-07 60.8 31 90.3
PRCOL_00000565 Prasinoderma coloniale HOM05D004350 ORTHO05D008939 1.0e-07 60.8 80 37.5
Sabra07G0008400 Salix brachista HOM05D004350 ORTHO05D005260 3.8e-07 58.9 31 83.9
Cre08.g363500 Chlamydomonas reinhardtii HOM05D004350 ORTHO05D008939 1.4e-06 57.0 84 34.5
PGSC0003DMG400016135 Solanum tuberosum HOM05D004350 ORTHO05D005260 1.9e-06 56.6 51 54.9


User provided reference genes

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