Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr16g0377291 Lupinus albus HOM05D001165 ORTHO05D001347 1.1e-30 136.0 66 100.0
Lalb_Chr09g0321331 Lupinus albus HOM05D001165 ORTHO05D001347 8.8e-25 116.3 59 93.2
Glyma.01G160300 Glycine max HOM05D001165 ORTHO05D001347 4.2e-19 97.4 58 79.3
arahy.Tifrunner.gnm1.ann1.QU6E8I Arachis hypogaea HOM05D001165 ORTHO05D001347 2.8e-18 94.7 57 78.9
arahy.Tifrunner.gnm1.ann1.VQI5ED Arachis hypogaea HOM05D001165 ORTHO05D001347 2.8e-18 94.7 57 78.9
Ca_24958_v3 Cicer arietinum L. HOM05D001165 ORTHO05D001347 3.6e-18 94.4 50 90.0
VMungo1215G1000 Vigna mungo HOM05D001165 ORTHO05D001347 3.6e-18 94.4 58 75.9
Phvul.002G113900 Phaseolus vulgaris HOM05D001165 ORTHO05D001347 2.3e-17 91.7 58 74.1
Atru.chr6.2999 Acer truncatum HOM05D001165 ORTHO05D001347 3.0e-17 91.3 58 74.1
Glyma.11G083600 Glycine max HOM05D001165 ORTHO05D001347 3.0e-17 91.3 59 76.3
Lj2g0018357 Lotus japonicus HOM05D001165 ORTHO05D001347 3.0e-17 91.3 57 78.9
QL06p052529 Quercus lobata HOM05D001165 ORTHO05D001347 3.7e-15 84.3 51 76.5
Thecc.02G019200 Theobroma cacao HOM05D001165 ORTHO05D001347 3.7e-15 84.3 57 64.9
Psat2g130080 Pisum sativum HOM05D001165 ORTHO05D001347 4.9e-15 84.0 57 70.2
Manes.09G037800 Manihot esculenta HOM05D001165 ORTHO05D001347 1.8e-14 82.0 57 66.7
EL10Ac6g15749 Beta vulgaris HOM05D001165 ORTHO05D001347 3.1e-14 81.3 46 76.1
Medtr5g023660 Medicago truncatula HOM05D001165 ORTHO05D001347 4.1e-14 80.9 48 81.2
Medtr6g084890 Medicago truncatula HOM05D001165 ORTHO05D001347 4.1e-14 80.9 48 81.2
Medtr6g037900 Medicago truncatula HOM05D001165 ORTHO05D001347 7.0e-14 80.1 48 81.2
TPR.G19244 Trifolium pratense HOM05D001165 ORTHO05D001347 1.6e-13 79.0 46 80.4
TPR.G25144 Trifolium pratense HOM05D001165 ORTHO05D001347 1.6e-13 79.0 46 80.4
Gohir.A01G183300 Gossypium hirsutum HOM05D001165 ORTHO05D001347 2.0e-13 78.6 49 71.4
Gohir.D01G174400 Gossypium hirsutum HOM05D001165 ORTHO05D001347 2.0e-13 78.6 49 71.4
GSVIVG01033464001 Vitis vinifera HOM05D001165 ORTHO05D001347 2.0e-13 78.6 52 69.2
Ciclev10000251m.g Citrus clementina HOM05D001165 ORTHO05D001347 2.7e-13 78.2 60 63.3
CANSAT64G0692 Cannabis sativa HOM05D001165 ORTHO05D001347 3.5e-13 77.8 48 72.9
Medtr4g017850 Medicago truncatula HOM05D001165 ORTHO05D001347 4.5e-13 77.4 46 78.3
Gorai.002G216500 Gossypium raimondii HOM05D001165 ORTHO05D001347 5.9e-13 77.0 49 69.4
Medtr7g007090 Medicago truncatula HOM05D001165 ORTHO05D001347 7.8e-13 76.6 46 80.4
Thhalv10006850m.g Eutrema salsugineum HOM05D001165 ORTHO05D001347 1.1e-11 72.8 45 71.1
Aa31LG2G9200 Aethionema arabicum HOM05D001165 ORTHO05D001347 1.5e-11 72.4 45 71.1
Hund16326 Selenicereus undatus HOM05D001165 ORTHO05D001347 1.5e-11 72.4 46 71.7
Cpa.g.sc27.168 Carica papaya HOM05D001165 ORTHO05D001347 1.9e-11 72.0 48 70.8
Sp1g10040 Schrenkiella parvula HOM05D001165 ORTHO05D001347 4.3e-11 70.9 45 68.9
AL2G40680 Arabidopsis lyrata HOM05D001165 ORTHO05D001347 1.2e-10 69.3 45 64.4
AT1G80740 Arabidopsis thaliana HOM05D001165 ORTHO05D001347 1.2e-10 69.3 45 64.4
Carub.0002s2681 Capsella rubella HOM05D001165 ORTHO05D001347 1.2e-10 69.3 45 64.4
CARHR011650 Cardamine hirsuta HOM05D001165 ORTHO05D001347 1.2e-10 69.3 45 64.4
Sed0004362 Sechium edule HOM05D001165 ORTHO05D001347 1.6e-10 68.9 51 62.7
EL10Ac7g17475 Beta vulgaris HOM05D001165 ORTHO05D001347 3.6e-10 67.8 41 70.7
CARHR073750 Cardamine hirsuta HOM05D001165 ORTHO05D001347 3.6e-10 67.8 45 62.2
A06p08030 Brassica napus HOM05D001165 ORTHO05D001347 8.0e-10 66.6 45 62.2
THA.LOC104809536 Tarenaya hassleriana HOM05D001165 ORTHO05D001347 1.0e-09 66.2 45 64.4
TPR.G37261 Trifolium pratense HOM05D001165 ORTHO05D001347 1.4e-09 65.9 45 68.9
BcaC05g25016 Brassica carinata HOM05D001165 ORTHO05D001347 1.8e-09 65.5 45 62.2
C05p09630 Brassica napus HOM05D001165 ORTHO05D001347 1.8e-09 65.5 45 62.2
BolC5t29705H Brassica oleracea HOM05D001165 ORTHO05D001347 1.8e-09 65.5 45 62.2
BraA06t24002Z Brassica rapa HOM05D001165 ORTHO05D001347 1.8e-09 65.5 45 62.2
AL2G14580 Arabidopsis lyrata HOM05D001165 ORTHO05D001347 3.1e-09 64.7 45 64.4
Thecc.09G214800 Theobroma cacao HOM05D001165 ORTHO05D001347 6.8e-09 63.5 56 57.1
ClCG03G013970 Citrullus lanatus HOM05D001165 ORTHO05D001347 8.9e-09 63.2 51 60.8
Duzib068G0158 Durio zibethinus HOM05D001165 ORTHO05D001347 1.2e-08 62.8 50 62.0
Sed0019999 Sechium edule HOM05D001165 ORTHO05D001347 1.5e-08 62.4 51 58.8
ATR0829G097 Amborella trichopoda HOM05D001165 ORTHO05D001347 2.0e-08 62.0 51 62.7
CsaV3_1G042250 Cucumis sativus L. HOM05D001165 ORTHO05D001347 3.4e-08 61.2 50 58.0
Nn2g15742 Nelumbo nucifera HOM05D001165 ORTHO05D001347 3.4e-08 61.2 56 51.8
CiPaw.13G171700 Carya illinoinensis HOM05D001165 ORTHO05D001347 4.4e-08 60.8 58 55.2
HanXRQChr17g0543611 Helianthus annuus HOM05D001165 ORTHO05D001347 4.4e-08 60.8 59 50.8
CSS0034027 Camellia sinensis var. sinensis HOM05D001165 ORTHO05D001347 5.8e-08 60.5 56 55.4
CSS0038763 Camellia sinensis var. sinensis HOM05D001165 ORTHO05D001347 5.8e-08 60.5 56 55.4
Nitab4.5_0001620g0010 Nicotiana tabacum HOM05D001165 ORTHO05D001347 5.8e-08 60.5 50 60.0
Nitab4.5_0005477g0020 Nicotiana tabacum HOM05D001165 ORTHO05D001347 5.8e-08 60.5 50 60.0
Ah.06g193090 Amaranthus hybridus HOM05D001165 ORTHO05D001347 7.5e-08 60.1 57 50.9
Cpa.g.sc48.148 Carica papaya HOM05D001165 ORTHO05D001347 7.5e-08 60.1 41 65.9
Duzib205G0564 Durio zibethinus HOM05D001165 ORTHO05D001347 7.5e-08 60.1 50 62.0
MBI13_g42370_MAGBIO Magnolia biondii HOM05D001165 ORTHO05D001347 7.5e-08 60.1 50 58.0
GSVIVG01025386001 Vitis vinifera HOM05D001165 ORTHO05D001347 7.5e-08 60.1 43 67.4
Actinidia06857 Actinidia chinensis HOM05D001165 ORTHO05D001347 9.8e-08 59.7 51 58.8
CDE05G1370 Ceratophyllum demersum HOM05D001165 ORTHO05D001347 9.8e-08 59.7 46 60.9
ECA246G0530 Erigeron canadensis HOM05D001165 ORTHO05D001347 9.8e-08 59.7 53 50.9
Lsat_1_v5_gn_4_68381 Lactuca sativa HOM05D001165 ORTHO05D001347 9.8e-08 59.7 57 45.6
arahy.Tifrunner.gnm1.ann1.FW39NC Arachis hypogaea HOM05D001165 ORTHO05D001347 1.3e-07 59.3 42 69.0
arahy.Tifrunner.gnm1.ann1.IN8D84 Arachis hypogaea HOM05D001165 ORTHO05D001347 1.3e-07 59.3 42 69.0
Thhalv10018159m.g Eutrema salsugineum HOM05D001165 ORTHO05D001347 1.3e-07 59.3 40 65.0
TPR.G32699 Trifolium pratense HOM05D001165 ORTHO05D001347 1.3e-07 59.3 42 66.7
Dinv24043 Davidia involucrata HOM05D001165 ORTHO05D001347 1.7e-07 58.9 51 52.9
Gohir.A07G044300 Gossypium hirsutum HOM05D001165 ORTHO05D001347 1.7e-07 58.9 57 54.4
Gohir.A13G032151 Gossypium hirsutum HOM05D001165 ORTHO05D001347 1.7e-07 58.9 57 54.4
Gorai.001G052000 Gossypium raimondii HOM05D001165 ORTHO05D001347 1.7e-07 58.9 57 54.4
Lj6C822T7 Lonicera japonica HOM05D001165 ORTHO05D001347 1.7e-07 58.9 45 62.2
Manes.03G089100 Manihot esculenta HOM05D001165 ORTHO05D001347 1.7e-07 58.9 56 51.8
Medtr6g088740 Medicago truncatula HOM05D001165 ORTHO05D001347 1.7e-07 58.9 49 57.1
Hund21648 Selenicereus undatus HOM05D001165 ORTHO05D001347 1.7e-07 58.9 56 50.0
vmacro22119 Vaccinium macrocarpon HOM05D001165 ORTHO05D001347 1.7e-07 58.9 47 55.3
Actinidia38596 Actinidia chinensis HOM05D001165 ORTHO05D001347 2.2e-07 58.5 46 56.5
EL10Ac4g10341 Beta vulgaris HOM05D001165 ORTHO05D001347 2.2e-07 58.5 57 52.6
CAN.G140.16 Capsicum annuum HOM05D001165 ORTHO05D001347 2.2e-07 58.5 45 64.4
AUR62001932 Chenopodium quinoa HOM05D001165 ORTHO05D001347 2.2e-07 58.5 46 54.3
AUR62003878 Chenopodium quinoa HOM05D001165 ORTHO05D001347 2.2e-07 58.5 45 57.8
COL.COLO4_10748 Corchorus olitorius HOM05D001165 ORTHO05D001347 2.2e-07 58.5 50 54.0
FvH4_1g00970 Fragaria vesca HOM05D001165 ORTHO05D001347 2.2e-07 58.5 38 73.7
FAN28G2049 Fragaria x ananassa HOM05D001165 ORTHO05D001347 2.2e-07 58.5 38 73.7
Lj4g0017684 Lotus japonicus HOM05D001165 ORTHO05D001347 2.2e-07 58.5 50 60.0
Dinv17266 Davidia involucrata HOM05D001165 ORTHO05D001347 2.9e-07 58.2 41 68.3
FAN23G1830 Fragaria x ananassa HOM05D001165 ORTHO05D001347 2.9e-07 58.2 38 71.1
Hma1.2p1_2403F.1_g321410 Hydrangea macrophylla HOM05D001165 ORTHO05D001347 2.9e-07 58.2 43 60.5
SEGI_14348 Sequoiadendron giganteum HOM05D001165 ORTHO05D001347 2.9e-07 58.2 46 58.7
SGA_v2.0_scaffold95G28781 Striga asiatica HOM05D001165 ORTHO05D001347 2.9e-07 58.2 51 58.8
Actinidia16271 Actinidia chinensis HOM05D001165 ORTHO05D001347 3.7e-07 57.8 57 49.1
CDE05G0420 Ceratophyllum demersum HOM05D001165 ORTHO05D001347 3.7e-07 57.8 46 58.7
Peaxi162Scf00062g00201 Petunia axillaris HOM05D001165 ORTHO05D001347 3.7e-07 57.8 48 56.2
Solyc01g006100.4 Solanum lycopersicum HOM05D001165 ORTHO05D001347 3.7e-07 57.8 50 58.0
Sopen01g002100 Solanum pennellii HOM05D001165 ORTHO05D001347 3.7e-07 57.8 50 58.0
SGA_v2.0_scaffold4G02239 Striga asiatica HOM05D001165 ORTHO05D001347 3.7e-07 57.8 51 54.9
Lsat_1_v5_gn_3_37841 Lactuca sativa HOM05D001165 ORTHO05D001347 4.9e-07 57.4 52 53.8
ATR0598G105 Amborella trichopoda HOM05D001165 ORTHO05D001347 6.4e-07 57.0 54 57.4
Aqoxy1G04267 Aquilegia oxysepala HOM05D001165 ORTHO05D001347 6.4e-07 57.0 40 65.0
Ciclev10014232m.g Citrus clementina HOM05D001165 ORTHO05D001347 6.4e-07 57.0 57 49.1
DCAR_005032 Daucus carota HOM05D001165 ORTHO05D001347 6.4e-07 57.0 50 54.0
VMungo0251G2970 Vigna mungo HOM05D001165 ORTHO05D001347 6.4e-07 57.0 54 53.7
COL.COLO4_10449 Corchorus olitorius HOM05D001165 ORTHO05D001347 8.3e-07 56.6 50 52.0
HanXRQChr15g0479131 Helianthus annuus HOM05D001165 ORTHO05D001347 8.3e-07 56.6 43 55.8
Hma1.2p1_1813F.1_g303890 Hydrangea macrophylla HOM05D001165 ORTHO05D001347 8.3e-07 56.6 43 62.8
Lj1C1132T6 Lonicera japonica HOM05D001165 ORTHO05D001347 8.3e-07 56.6 50 56.0
Phvul.003G273100 Phaseolus vulgaris HOM05D001165 ORTHO05D001347 8.3e-07 56.6 58 50.0
Sabra01G0007500 Salix brachista HOM05D001165 ORTHO05D001347 8.3e-07 56.6 51 56.9
vmacro10103 Vaccinium macrocarpon HOM05D001165 ORTHO05D001347 8.3e-07 56.6 49 55.1
VMungo0464G1904 Vigna mungo HOM05D001165 ORTHO05D001347 8.3e-07 56.6 60 56.7
Haze_22993 Corylus avellana HOM05D001165 ORTHO05D001347 1.1e-06 56.2 52 59.6
Phvul.004G176100 Phaseolus vulgaris HOM05D001165 ORTHO05D001347 1.1e-06 56.2 60 56.7
Solyc12g100330.2 Solanum lycopersicum HOM05D001165 ORTHO05D001347 1.1e-06 56.2 43 60.5
PGSC0003DMG400004285 Solanum tuberosum HOM05D001165 ORTHO05D001347 1.1e-06 56.2 43 60.5
TPR.G25460 Trifolium pratense HOM05D001165 ORTHO05D001347 1.1e-06 56.2 42 66.7
COL.COLO4_16882 Corchorus olitorius HOM05D001165 ORTHO05D001347 1.4e-06 55.8 56 50.0
Migut.D02536 Erythranthe guttata HOM05D001165 ORTHO05D001347 1.4e-06 55.8 55 52.7
Glyma.16G103500 Glycine max HOM05D001165 ORTHO05D001347 1.4e-06 55.8 56 48.2
Medtr6g088715 Medicago truncatula HOM05D001165 ORTHO05D001347 1.4e-06 55.8 42 64.3
Oeu029377.1 Olea europaea HOM05D001165 ORTHO05D001347 1.4e-06 55.8 49 55.1
RcHm_v2.0_Chr4g0398431 Rosa chinensis HOM05D001165 ORTHO05D001347 1.4e-06 55.8 42 59.5
Aqoxy1G04166 Aquilegia oxysepala HOM05D001165 ORTHO05D001347 1.9e-06 55.5 50 56.0
Aqoxy2G04079 Aquilegia oxysepala HOM05D001165 ORTHO05D001347 1.9e-06 55.5 58 48.3
Cc01_g01020 Coffea canephora HOM05D001165 ORTHO05D001347 1.9e-06 55.5 47 55.3
Glyma.01G007800 Glycine max HOM05D001165 ORTHO05D001347 1.9e-06 55.5 60 55.0
Hma1.2p1_0840F.1_g226760 Hydrangea macrophylla HOM05D001165 ORTHO05D001347 1.9e-06 55.5 50 54.0
Potri.001G009600 Populus trichocarpa HOM05D001165 ORTHO05D001347 1.9e-06 55.5 51 54.9
PGR031G1844 Punica granatum HOM05D001165 ORTHO05D001347 1.9e-06 55.5 56 51.8
Ca_25573_v3 Cicer arietinum L. HOM05D001165 ORTHO05D001347 2.4e-06 55.1 58 53.4
DCAR_006422 Daucus carota HOM05D001165 ORTHO05D001347 2.4e-06 55.1 47 59.6
Lj2g0012913 Lotus japonicus HOM05D001165 ORTHO05D001347 2.4e-06 55.1 49 59.2
Peaxi162Scf00441g00015 Petunia axillaris HOM05D001165 ORTHO05D001347 2.4e-06 55.1 50 56.0
Rhsim09G0199300 Rhododendron simsii HOM05D001165 ORTHO05D001347 2.4e-06 55.1 50 52.0
CAN.G575.11 Capsicum annuum HOM05D001165 ORTHO05D001347 3.2e-06 54.7 43 60.5
Lalb_Chr24g0397301 Lupinus albus HOM05D001165 ORTHO05D001347 3.2e-06 54.7 43 65.1
Nn1g02006 Nelumbo nucifera HOM05D001165 ORTHO05D001347 3.2e-06 54.7 57 56.1
Nitab4.5_0004389g0060 Nicotiana tabacum HOM05D001165 ORTHO05D001347 3.2e-06 54.7 43 60.5
TWI39G0611 Tripterygium wilfordii HOM05D001165 ORTHO05D001347 3.2e-06 54.7 52 51.9
Aqoxy4G01202 Aquilegia oxysepala HOM05D001165 ORTHO05D001347 4.1e-06 54.3 49 53.1
MELO3C015649.2 Cucumis melo HOM05D001165 ORTHO05D001347 4.1e-06 54.3 36 69.4
ECA246G0767 Erigeron canadensis HOM05D001165 ORTHO05D001347 4.1e-06 54.3 53 49.1
ECA246G3701 Erigeron canadensis HOM05D001165 ORTHO05D001347 4.1e-06 54.3 52 51.9
Lj3C889G12 Lonicera japonica HOM05D001165 ORTHO05D001347 4.1e-06 54.3 50 54.0
Lj5g0010349 Lotus japonicus HOM05D001165 ORTHO05D001347 4.1e-06 54.3 50 60.0
Sabra03G0068000 Salix brachista HOM05D001165 ORTHO05D001347 4.1e-06 54.3 52 55.8
SGA_v2.0_scaffold227G43149 Striga asiatica HOM05D001165 ORTHO05D051406 4.1e-06 54.3 49 55.1
CiPaw.11G101500 Carya illinoinensis HOM05D001165 ORTHO05D001347 5.4e-06 53.9 41 63.4
COL.COLO4_14287 Corchorus olitorius HOM05D001165 ORTHO05D001347 5.4e-06 53.9 43 58.1
FvH4_2g39560 Fragaria vesca HOM05D001165 ORTHO05D001347 5.4e-06 53.9 43 60.5
Lsat_1_v5_gn_6_36561 Lactuca sativa HOM05D001165 ORTHO05D001347 5.4e-06 53.9 50 52.0
Lj1C16T19 Lonicera japonica HOM05D001165 ORTHO05D001347 5.4e-06 53.9 55 52.7
Lj5g0018302 Lotus japonicus HOM05D001165 ORTHO05D001347 5.4e-06 53.9 50 60.0
Lj5g0026814 Lotus japonicus HOM05D001165 ORTHO05D001347 5.4e-06 53.9 50 60.0
Rhsim09G0200800 Rhododendron simsii HOM05D001165 ORTHO05D001347 5.4e-06 53.9 47 53.2
Cfa009624 Carpinus fangiana HOM05D001165 ORTHO05D001347 7.0e-06 53.5 52 57.7
MBI13_g29649_MAGBIO Magnolia biondii HOM05D001165 ORTHO05D001347 7.0e-06 53.5 47 55.3
MD03G1011100 Malus domestica HOM05D001165 ORTHO05D001347 7.0e-06 53.5 43 60.5
Medtr5g066780 Medicago truncatula HOM05D001165 ORTHO05D001347 7.0e-06 53.5 42 61.9
Medtr5g066830 Medicago truncatula HOM05D001165 ORTHO05D001347 7.0e-06 53.5 42 61.9
Oeu038595.1 Olea europaea HOM05D001165 ORTHO05D001347 7.0e-06 53.5 43 55.8
MSTRG.18856 Avicennia marina HOM05D001165 ORTHO05D001347 9.2e-06 53.1 41 63.4
Haze_08101 Corylus avellana HOM05D001165 ORTHO05D001347 9.2e-06 53.1 52 53.8
Potri.003G100000 Populus trichocarpa HOM05D001165 ORTHO05D001347 9.2e-06 53.1 47 55.3
PGR119G1059 Punica granatum HOM05D001165 ORTHO05D001347 9.2e-06 53.1 50 56.0


User provided reference genes

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