Gene: Sp1g10040

General Information

Structural Information

  • Species Schrenkiella parvula
  • Gene Identifier Sp1g10040
  • Transcript Identifier Sp1g10040.1
  • Gene Type Coding gene
  • Location ch1-1 : 3565489-3570056 : negative

Gene Family Information

  • ID HOM05D001165
  • #Genes/#Species 531/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Sp1g10040.v2.2
  • pacid 45095226

Descriptions

  • Description PTHR10629:SF30 - DNA (CYTOSINE-5)-METHYLTRANSFERASE CMT1-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT1G80740
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development Solyc01g006100.4
GO:0009836
ISO
PLAZA Integrative Orthologyfruit ripening, climacteric Solyc01g006100.4
GO:0010216
ISO
PLAZA Integrative Orthologymaintenance of DNA methylation Os10g0104900
GO:0032776
ISO
PLAZA Integrative OrthologyDNA methylation on cytosine Os10g0104900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008168
IEA
InterPromethyltransferase activity
GO:0003682
IEA
InterProchromatin binding
GO:0003886
ISO
PLAZA Integrative OrthologyDNA (cytosine-5-)-methyltransferase activity Solyc01g006100.4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001525 C-5 cytosine methyltransferase
IPR023780 Chromo domain
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR001025 Bromo adjacent homology (BAH) domain
IPR016197 Chromo-like domain superfamily
IPR000953 Chromo/chromo shadow domain
IPR043151 Bromo adjacent homology (BAH) domain superfamily
Mapman id Description
12.5.2.4 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.DNA chromomethylase (CMT)