Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0373091 Lupinus albus HOM05D004877 ORTHO05D005942 2.2e-188 662.1 332 100.0
Lalb_Chr24g0396111 Lupinus albus HOM05D004877 ORTHO05D005942 3.6e-167 591.7 332 88.9
Glyma.13G355300 Glycine max HOM05D004877 ORTHO05D005942 1.4e-158 563.1 332 84.9
arahy.Tifrunner.gnm1.ann1.64XDM2 Arachis hypogaea HOM05D004877 ORTHO05D005942 1.8e-158 562.8 332 83.7
arahy.Tifrunner.gnm1.ann1.4Y1F7A Arachis hypogaea HOM05D004877 ORTHO05D005942 5.2e-158 561.2 332 83.4
Glyma.15G018900 Glycine max HOM05D004877 ORTHO05D005942 2.0e-157 559.3 332 84.3
VMungo1080G0916 Vigna mungo HOM05D004877 ORTHO05D005942 8.3e-156 553.9 332 84.3
Ca_01157_v3 Cicer arietinum L. HOM05D004877 ORTHO05D005942 1.4e-155 553.1 332 82.5
Lj3g0003786 Lotus japonicus HOM05D004877 ORTHO05D005942 1.9e-155 552.7 332 82.5
Psat5g297080 Pisum sativum HOM05D004877 ORTHO05D005942 3.9e-153 545.0 332 81.6
TPR.G37257 Trifolium pratense HOM05D004877 ORTHO05D005942 1.1e-152 543.5 333 81.1
Phvul.005G167000 Phaseolus vulgaris HOM05D004877 ORTHO05D005942 5.6e-152 541.2 332 83.4
Medtr2g101270 Medicago truncatula HOM05D004877 ORTHO05D005942 6.4e-148 527.7 332 80.1
QL05p020530 Quercus lobata HOM05D004877 ORTHO05D005942 1.2e-146 523.5 332 80.4
CiPaw.01G232800 Carya illinoinensis HOM05D004877 ORTHO05D005942 1.3e-140 503.4 334 76.0
TWI18G0989 Tripterygium wilfordii HOM05D004877 ORTHO05D005942 6.4e-140 501.1 333 75.7
CANSAT01G3179 Cannabis sativa HOM05D004877 ORTHO05D005942 8.4e-140 500.7 333 76.3
Thecc.06G097500 Theobroma cacao HOM05D004877 ORTHO05D005942 3.2e-139 498.8 330 76.1
Eucgr.J02948 Eucalyptus grandis HOM05D004877 ORTHO05D005942 1.2e-138 496.9 332 75.3
CiPaw.02G146900 Carya illinoinensis HOM05D004877 ORTHO05D005942 1.7e-137 493.0 334 76.0
Duzib235G0210 Durio zibethinus HOM05D004877 ORTHO05D005942 6.6e-137 491.1 330 74.8
Gohir.A02G118600 Gossypium hirsutum HOM05D004877 ORTHO05D005942 1.1e-136 490.3 331 74.3
Atru.chr1.3498 Acer truncatum HOM05D004877 ORTHO05D005942 1.9e-136 489.6 333 74.2
Ciclev10026016m.g Citrus clementina HOM05D004877 ORTHO05D005942 2.1e-135 486.1 339 74.6
Gorai.003G063100 Gossypium raimondii HOM05D004877 ORTHO05D005942 4.8e-135 485.0 331 73.7
arahy.Tifrunner.gnm1.ann1.NE95XN Arachis hypogaea HOM05D004877 ORTHO05D005942 6.9e-134 481.1 354 71.2
arahy.Tifrunner.gnm1.ann1.WG6QSW Arachis hypogaea HOM05D004877 ORTHO05D005942 6.9e-134 481.1 354 71.2
PGR102G2474 Punica granatum HOM05D004877 ORTHO05D005942 1.2e-133 480.3 337 73.3
Dinv37993 Davidia involucrata HOM05D004877 ORTHO05D005942 2.6e-133 479.2 338 72.8
Prupe.3G061200 Prunus persica HOM05D004877 ORTHO05D005942 2.6e-133 479.2 333 73.0
Gohir.D03G059200 Gossypium hirsutum HOM05D004877 ORTHO05D005942 3.4e-133 478.8 331 72.5
MD09G1205800 Malus domestica HOM05D004877 ORTHO05D005942 7.6e-133 477.6 333 73.0
Manes.04G132600 Manihot esculenta HOM05D004877 ORTHO05D005942 2.9e-132 475.7 334 73.4
Manes.11G035000 Manihot esculenta HOM05D004877 ORTHO05D005942 3.8e-132 475.3 334 73.4
ClCG09G000060 Citrullus lanatus HOM05D004877 ORTHO05D005942 8.4e-132 474.2 334 73.1
Duzib192G0168 Durio zibethinus HOM05D004877 ORTHO05D005942 8.4e-132 474.2 330 72.7
GSVIVG01017013001 Vitis vinifera HOM05D004877 ORTHO05D005942 1.4e-131 473.4 333 74.5
AUR62022182 Chenopodium quinoa HOM05D004877 ORTHO05D005942 5.4e-131 471.5 332 71.7
Ah.01g005680 Amaranthus hybridus HOM05D004877 ORTHO05D005942 9.3e-131 470.7 333 72.7
COL.COLO4_30486 Corchorus olitorius HOM05D004877 ORTHO05D005942 3.5e-130 468.8 331 73.4
THA.LOC104817965 Tarenaya hassleriana HOM05D004877 ORTHO05D005942 6.0e-130 468.0 333 71.2
AUR62031885 Chenopodium quinoa HOM05D004877 ORTHO05D005942 7.9e-130 467.6 333 71.5
CSS0014120 Camellia sinensis var. sinensis HOM05D004877 ORTHO05D005942 1.0e-129 467.2 336 71.7
MD17G1186700 Malus domestica HOM05D004877 ORTHO05D005942 1.3e-129 466.8 333 70.6
CsaV3_7G035410 Cucumis sativus L. HOM05D004877 ORTHO05D005942 5.1e-129 464.9 334 71.6
FAN05G1125 Fragaria x ananassa HOM05D004877 ORTHO05D005942 5.1e-129 464.9 335 71.3
RcHm_v2.0_Chr2g0140061 Rosa chinensis HOM05D004877 ORTHO05D005942 5.1e-129 464.9 335 72.5
Hund06654 Selenicereus undatus HOM05D004877 ORTHO05D005942 5.1e-129 464.9 333 72.4
Sp3g14680 Schrenkiella parvula HOM05D004877 ORTHO05D005942 6.7e-129 464.5 334 71.6
Thhalv10021095m.g Eutrema salsugineum HOM05D004877 ORTHO05D005942 2.5e-128 462.6 336 70.8
Gohir.D03G059150 Gossypium hirsutum HOM05D004877 ORTHO05D005942 3.3e-128 462.2 318 73.0
FAN14G1716 Fragaria x ananassa HOM05D004877 ORTHO05D005942 5.6e-128 461.5 335 71.3
Actinidia32706 Actinidia chinensis HOM05D004877 ORTHO05D005942 7.4e-128 461.1 338 71.0
Cc04_g02700 Coffea canephora HOM05D004877 ORTHO05D005942 9.6e-128 460.7 339 71.7
Sc10g0007170 Simmondsia chinensis HOM05D004877 ORTHO05D005942 9.6e-128 460.7 335 71.0
FvH4_6g32170 Fragaria vesca HOM05D004877 ORTHO05D005942 1.3e-127 460.3 335 71.3
MELO3C024450.2 Cucumis melo HOM05D004877 ORTHO05D005942 2.1e-127 459.5 334 70.4
FAN02G1875 Fragaria x ananassa HOM05D004877 ORTHO05D005942 4.8e-127 458.4 335 71.3
Peaxi162Scf00038g00844 Petunia axillaris HOM05D004877 ORTHO05D005942 6.2e-127 458.0 341 67.7
FAN09G1375 Fragaria x ananassa HOM05D004877 ORTHO05D005942 8.1e-127 457.6 335 70.7
Potri.001G188300 Populus trichocarpa HOM05D004877 ORTHO05D005942 8.1e-127 457.6 324 72.2
Dinv30451 Davidia involucrata HOM05D004877 ORTHO05D005942 1.4e-126 456.8 338 70.1
SalBow1G2757 Salvia bowleyana HOM05D004877 ORTHO05D005942 1.8e-126 456.4 339 69.0
SalBow2G1418 Salvia bowleyana HOM05D004877 ORTHO05D005942 1.8e-126 456.4 339 69.0
Sed0013882 Sechium edule HOM05D004877 ORTHO05D005942 1.8e-126 456.4 331 71.6
Hund00671 Selenicereus undatus HOM05D004877 ORTHO05D005942 4.0e-126 455.3 335 70.4
AT3G16310 Arabidopsis thaliana HOM05D004877 ORTHO05D005942 6.9e-126 454.5 333 70.0
Sc10g0007240 Simmondsia chinensis HOM05D004877 ORTHO05D005942 2.0e-125 453.0 335 69.9
EL10Ac9g22101 Beta vulgaris HOM05D004877 ORTHO05D005942 2.6e-125 452.6 379 64.1
Lj9A511G47 Lonicera japonica HOM05D004877 ORTHO05D005942 2.6e-125 452.6 341 69.8
AL3G29060 Arabidopsis lyrata HOM05D004877 ORTHO05D005942 4.5e-125 451.8 333 69.7
PGSC0003DMG400002534 Solanum tuberosum HOM05D004877 ORTHO05D005942 2.2e-124 449.5 338 66.3
Sopen03g039700 Solanum pennellii HOM05D004877 ORTHO05D005942 4.9e-124 448.4 338 66.6
CAN.G438.5 Capsicum annuum HOM05D004877 ORTHO05D005942 6.4e-124 448.0 339 67.8
Gorai.011G072600 Gossypium raimondii HOM05D004877 ORTHO05D005942 6.4e-124 448.0 330 68.2
Nitab4.5_0003167g0040 Nicotiana tabacum HOM05D004877 ORTHO05D005942 6.4e-124 448.0 338 66.6
Nitab4.5_0001755g0090 Nicotiana tabacum HOM05D004877 ORTHO05D005942 1.1e-123 447.2 338 66.3
Carub.0003s1606 Capsella rubella HOM05D004877 ORTHO05D005942 1.4e-123 446.8 334 69.5
Sabra01G0152700 Salix brachista HOM05D004877 ORTHO05D005942 1.9e-123 446.4 334 69.2
TAR636G0039 Trochodendron aralioides HOM05D004877 ORTHO05D005942 5.5e-123 444.9 333 66.7
Aa31LG8G3450 Aethionema arabicum HOM05D004877 ORTHO05D005942 7.1e-123 444.5 330 67.6
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 9.3e-123 444.1 338 66.0
CARHR091520 Cardamine hirsuta HOM05D004877 ORTHO05D005942 1.3e-121 440.3 323 70.3
Gohir.A10G066900 Gossypium hirsutum HOM05D004877 ORTHO05D005942 1.3e-121 440.3 330 67.9
Nn8g39120 Nelumbo nucifera HOM05D004877 ORTHO05D005942 3.3e-120 435.6 354 64.7
BcaC05g28894 Brassica carinata HOM05D004877 ORTHO05D005942 9.6e-120 434.1 334 68.9
Rhsim08G0226300 Rhododendron simsii HOM05D004877 ORTHO05D005942 1.8e-118 429.9 347 68.0
BraA05t22146Z Brassica rapa HOM05D004877 ORTHO05D005942 3.1e-118 429.1 331 68.0
Gohir.D10G068000 Gossypium hirsutum HOM05D004877 ORTHO05D005942 9.0e-118 427.6 330 66.1
TAR624G0319 Trochodendron aralioides HOM05D004877 ORTHO05D005942 1.2e-117 427.2 334 66.5
C05p50190 Brassica napus HOM05D004877 ORTHO05D005942 4.5e-117 425.2 328 68.0
BolC5t33769H Brassica oleracea HOM05D004877 ORTHO05D005942 4.5e-117 425.2 328 68.0
BcaB06g25724 Brassica carinata HOM05D004877 ORTHO05D005942 2.2e-116 422.9 338 68.3
CSS0036359 Camellia sinensis var. sinensis HOM05D004877 ORTHO05D005942 2.9e-116 422.5 340 67.1
Oeu001891.1 Olea europaea HOM05D004877 ORTHO05D005942 2.9e-116 422.5 334 65.0
MBI01_g42890_MAGBIO Magnolia biondii HOM05D004877 ORTHO05D005942 8.4e-116 421.0 339 65.8
Aqoxy7G01469 Aquilegia oxysepala HOM05D004877 ORTHO05D005942 2.7e-114 416.0 335 64.5
DCAR_016196 Daucus carota HOM05D004877 ORTHO05D005942 1.3e-113 413.7 339 64.3
MSTRG.11036 Avicennia marina HOM05D004877 ORTHO05D005942 2.5e-112 409.5 339 64.9
MSTRG.22647 Avicennia marina HOM05D004877 ORTHO05D005942 9.7e-112 407.5 341 63.0
SGA_v2.0_scaffold69G23330 Striga asiatica HOM05D004877 ORTHO05D005942 9.7e-112 407.5 338 63.0
Sed0014944 Sechium edule HOM05D004877 ORTHO05D005942 5.9e-109 398.3 332 63.9
Lj9A524G48 Lonicera japonica HOM05D004877 ORTHO05D005942 1.7e-108 396.7 358 61.7
Lsat_1_v5_gn_4_99980 Lactuca sativa HOM05D004877 ORTHO05D005942 9.3e-107 391.0 355 61.7
CDE05G3078 Ceratophyllum demersum HOM05D004877 ORTHO05D005942 1.4e-102 377.1 337 60.8
Cpa.g.c40702 Carica papaya HOM05D004877 ORTHO05D005942 6.9e-102 374.8 263 73.4
PSO173G0077 Papaver somniferum HOM05D004877 ORTHO05D005942 9.1e-102 374.4 356 60.1
unitig_46.g18560 Utricularia gibba HOM05D004877 ORTHO05D005942 4.5e-101 372.1 341 57.5
PSO832G2273 Papaver somniferum HOM05D004877 ORTHO05D005942 1.7e-100 370.2 353 59.2
ATR0705G205 Amborella trichopoda HOM05D004877 ORTHO05D005942 5.0e-100 368.6 343 59.2
unitig_37.g12259 Utricularia gibba HOM05D004877 ORTHO05D005942 1.2e-98 364.0 328 57.9
vmacro18867 Vaccinium macrocarpon HOM05D004877 ORTHO05D005942 1.0e-97 360.9 284 66.9
Haze_15830 Corylus avellana HOM05D002410 ORTHO05D002805 1.4e-97 360.5 321 62.9
HanXRQChr09g0275881 Helianthus annuus HOM05D004877 ORTHO05D005942 9.1e-94 347.8 357 56.9
CDE05G1429 Ceratophyllum demersum HOM05D004877 ORTHO05D005942 3.4e-93 345.9 336 56.8
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 1.1e-86 324.3 321 56.4
TAR624G1397 Trochodendron aralioides HOM05D004877 ORTHO05D005942 2.3e-81 306.6 231 68.0
Haze_15829 Corylus avellana HOM05D004877 ORTHO05D005942 4.8e-79 298.9 254 63.4
arahy.Tifrunner.gnm1.ann1.XV48AZ Arachis hypogaea HOM05D004877 ORTHO05D005942 5.5e-75 285.4 187 77.0
Peaxi162Scf00894g00009 Petunia axillaris HOM05D004877 ORTHO05D005942 9.4e-75 284.6 211 68.7
Actinidia39142 Actinidia chinensis HOM05D004877 ORTHO05D005942 1.0e-73 281.2 247 64.0
HanXRQChr16g0501211 Helianthus annuus HOM05D004877 ORTHO05D005942 3.5e-69 266.2 352 47.7
Peaxi162Scf11517g00001 Petunia axillaris HOM05D004877 ORTHO05D005942 8.9e-65 251.5 189 68.3
Migut.I00909 Erythranthe guttata HOM05D004877 ORTHO05D005942 2.0e-64 250.4 268 57.5
SEGI_39894 Sequoiadendron giganteum HOM05D004877 ORTHO05D005942 1.2e-61 241.1 381 41.2
Mapoly0014s0033 Marchantia polymorpha HOM05D004877 ORTHO05D005942 5.6e-59 232.3 351 42.7
Pp3c5_15240 Physcomitrium patens HOM05D004877 ORTHO05D005942 1.7e-55 220.7 355 41.4
Pp3c6_16260 Physcomitrium patens HOM05D004877 ORTHO05D005942 4.9e-55 219.2 352 41.5
Os01g0200500 Oryza sativa ssp. japonica HOM05D004877 ORTHO05D005942 3.9e-52 209.5 212 55.7
Zm00001eb337990 Zea mays HOM05D004877 ORTHO05D005942 5.6e-51 205.7 349 40.7
SMO144G0168 Selaginella moellendorffii HOM05D004877 ORTHO05D005942 4.1e-46 189.5 173 53.2
HPP92_002859 Vanilla planifolia HOM05D004877 ORTHO05D005942 3.9e-44 183.0 224 49.1
Zm00001eb293750 Zea mays HOM05D004877 ORTHO05D005942 4.3e-43 179.5 369 37.4
Os05g0520100 Oryza sativa ssp. japonica HOM05D004877 ORTHO05D005942 1.6e-37 161.0 374 34.0
AagrBONN_evm.TU.Sc2ySwM_117.2493 Anthoceros agrestis HOM05D004877 ORTHO05D005942 2.3e-36 157.1 334 37.7
Nn2g11613 Nelumbo nucifera HOM05D004877 ORTHO05D005942 7.3e-27 125.6 118 59.3
Zm00001eb353450 Zea mays HOM05D004877 ORTHO05D005942 2.1e-26 124.0 352 33.2
PSO675G8939 Papaver somniferum HOM05D004877 ORTHO05D005942 2.8e-26 123.6 133 48.9
CBR_g44943 Chara braunii HOM05D004877 ORTHO05D005942 1.1e-25 121.7 147 49.0
PSO824G0035 Papaver somniferum HOM05D004877 ORTHO05D007188 1.2e-24 118.2 87 62.1
PSO824G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 3.4e-24 116.7 85 67.1
SEGI_33810 Sequoiadendron giganteum HOM05D004877 ORTHO05D000002 1.3e-23 114.8 125 48.8
PSO173G0103 Papaver somniferum HOM05D005944 ORTHO05D007188 3.8e-23 113.2 87 59.8
PSO832G4257 Papaver somniferum HOM05D005944 ORTHO05D007188 5.4e-22 109.4 106 52.8
Nn5g29960 Nelumbo nucifera HOM05D004877 ORTHO05D005942 3.0e-20 103.6 103 56.3
Cre12.g553050 Chlamydomonas reinhardtii HOM05D004877 ORTHO05D005942 3.1e-17 93.6 153 36.6
PRCOL_00002288 Prasinoderma coloniale HOM05D004877 ORTHO05D005942 4.5e-16 89.7 338 26.6
TAR629G0138 Trochodendron aralioides HOM05D004753 ORTHO05D005920 7.6e-16 89.0 80 58.8
MD07G1258000 Malus domestica HOM05D004877 ORTHO05D005942 1.7e-15 87.8 54 75.9
TAR624G1091 Trochodendron aralioides HOM05D004877 ORTHO05D005942 1.4e-14 84.7 58 74.1
MD16G1217600 Malus domestica HOM05D004877 ORTHO05D005942 6.0e-13 79.3 57 63.2
Cpa.g.c43067 Carica papaya HOM05D004877 ORTHO05D005942 1.1e-11 75.1 40 87.5
Pp3c1_40780 Physcomitrium patens HOM05D004877 ORTHO05D005942 7.4e-11 72.4 171 31.6
PSO832G3272 Papaver somniferum HOM05D005944 ORTHO05D007188 5.3e-09 66.2 43 69.8
PSO173G0086 Papaver somniferum HOM05D005944 ORTHO05D007188 6.4e-07 59.3 53 52.8
PSO507G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 4.2e-06 56.6 38 71.1


User provided reference genes

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